scholarly journals Draft Genome Sequence of the Most Traditional ε-Poly-l-Lysine Producer, Streptomyces albulus NBRC14147

2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Kazuya Yamanaka ◽  
Yoshimitsu Hamano
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Lysine Producer

The genus Streptomyces is known for its secondary metabolite biosynthetic capacities. We report here the draft genome sequence of the most extensively studied ε-poly-l-lysine producer, Streptomyces albulus NBRC14147.

scholarly journals Draft Genome Sequence of Gordonia lacunae BS2T

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Kim Durrell ◽  
Alaric Prins ◽  
Marilize Le Roes-Hill
Keyword(s):  
South Africa ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Biosynthetic Genes ◽  
Content Type ◽  
New Compounds

ABSTRACT We report here the draft genome sequence of the soil bacterium Gordonia lacunae BS2T (= DSM 45085T = JCM 14873T = NRRL B-24551T), isolated from an estuary in Plettenberg Bay, South Africa. Analysis of the draft genome revealed that more than 40% of the secondary metabolite biosynthetic genes encode new compounds.

scholarly journals Draft Genome Sequence of the Type Strain Streptomyces armeniacus ATCC 15676

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Puneet Labana ◽  
Jessica T. Gosse ◽  
Christopher N. Boddy
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
De Novo ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Significant Source ◽  
Content Type

The Streptomyces genus represents a prolific and significant source for secondary metabolite discovery. Here, we report a de novo assembly and draft genome sequence for the type strain Streptomyces armeniacus ATCC 15676.

scholarly journals Draft Genome Sequence of Streptomyces olivochromogenes NBRC 3561, a Bioactive Peptide-Producing Actinobacterium

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Hideo Dohra ◽  
Yuto Miyake ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioactive Peptide ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Recently, we found that Streptomyces olivochromogenes NBRC 3561 produced a bioactive peptide, so we sequenced its genome to clarify its biosynthesis. We report here the draft genome sequence of S. olivochromogenes NBRC 3561, in which 40 potential secondary metabolite gene clusters were predicted by antiSMASH.

scholarly journals Draft Genome Sequence and Secondary Metabolite Biosynthetic Potential of the Lysobacter niastensis Type Strain DSM 18481

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Paolo Turrini ◽  
Irene Artuso ◽  
Marco Tescari ◽  
Gabriele Andrea Lugli ◽  
Emanuela Frangipani ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Small Molecules ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Lysobacter niastensis belongs to a group of bacterial predators that produce a number of bioactive small molecules endowed with lytic properties toward other microorganisms. Here, we report the draft genome sequence of the type strain DSM 18481 and the identification of gene clusters implicated in the biosynthesis of secondary metabolites.

scholarly journals Draft Genome Sequence of Streptomyces spongiicola Strain 531S, an Actinobacterium Isolated from Marine Sediment

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Hideo Dohra ◽  
Issara Kaweewan ◽  
Beatriz E. Casareto ◽  
Yoshimi Suzuki ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

Streptomyces spongiicola strain 531S (NBRC 113560) was isolated from marine sediment on a beach on Sesoko Island (Okinawa, Japan). We report here the draft genome sequence of S. spongiicola 531S, in which 24 potential secondary metabolite gene clusters were predicted with antiSMASH.

scholarly journals Draft Genome Sequence of an Onion Basal Rot Isolate of Fusarium proliferatum

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Andrew D. Armitage ◽  
Andrew Taylor ◽  
Michelle T. Hulin ◽  
Alison C. Jackson ◽  
Richard J. Harrison ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Fusarium Proliferatum ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Basal Rot ◽  
Rot Disease ◽  
Onion Basal Rot

Fusarium proliferatum is a component of the onion basal rot disease complex. We present an annotated F. proliferatum draft genome sequence, totaling 45.8 Mb in size, assembled into 597 contigs, with a predicted 15,418 genes. The genome contains 58 secondary metabolite clusters and homologs of the Fusarium oxysporum effector SIX2.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of a Vibrio harveyi Strain Associated with Vibriosis in Pacific White Shrimp (Litopenaeus vannamei)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Emille Moreno ◽  
Marci Parks ◽  
Lee J. Pinnell ◽  
James J. Tallman ◽  
Jeffrey W. Turner
Keyword(s):  
Genome Sequence ◽  
Litopenaeus Vannamei ◽  
Vibrio Harveyi ◽  
Draft Genome ◽  
Penaeid Shrimp ◽  
Pacific White Shrimp ◽  
Draft Genome Sequence ◽  
White Shrimp ◽  
Content Type ◽  
Future Studies

ABSTRACT Vibrio harveyi is a Gram-negative bacterium associated with vibriosis in penaeid shrimp. Here, we report the draft genome sequence of a V. harveyi strain isolated from Pacific white shrimp (Litopenaeus vannamei) during a vibriosis outbreak. The availability of this genome will aid future studies of vibriosis in shrimp aquaculture.

scholarly journals Draft Genome Sequence of Pantoea sp. Strain A4, a Rafflesia-Associated Bacterium That ProducesN-Acylhomoserine Lactones as Quorum-Sensing Molecules

2012 ◽  
Vol 194 (23) ◽  
pp. 6610-6610 ◽  
Author(s):  
Kar-Wai Hong ◽  
Han Ming Gan ◽  
Siew-Moon Low ◽  
Patrick Kok Yuen Lee ◽  
Yee-Meng Chong ◽  
...  
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Negative Bacterium ◽  
Gram Negative ◽  
Content Type ◽  
First Time

ABSTRACTPantoeasp. strain A4 is a Gram-negative bacterium isolated from theRafflesiaflower. We present here, for the first time, the genome sequence ofRafflesia-associatedPantoeasp. strain A4, which exhibited quorum-sensing activity.

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