scholarly journals Complete Genome Sequence of Phascolarctobacterium faecium JCM 30894, a Succinate-Utilizing Bacterium Isolated from Human Feces

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Yusuke Ogata ◽  
Wataru Suda ◽  
Nao Ikeyama ◽  
Masahira Hattori ◽  
Moriya Ohkuma ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Gut Microbiome ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Human Feces ◽  
Human Gut ◽  
Content Type ◽  
Human Gut Microbiome

Phascolarctobacterium faecium is an anaerobic microbe known as a member of the human gut microbiome. Here, we report the complete genome sequence of Phascolarctobacterium faecium JCM 30894 and the elucidation of the mechanism for utilization of succinate by this bacterium based on the genome analysis.

scholarly journals Complete Genome Sequence of Bifidobacterium longum Strain Jih1, Isolated from Human Feces

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Hikaru Inoue ◽  
Sayaka Shibata ◽  
Konosuke Ii ◽  
Joe Inoue ◽  
Shinji Fukuda ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bifidobacterium Longum ◽  
Human Feces ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

ABSTRACT We report the complete genome sequence of Bifidobacterium longum strain Jih1, isolated from human feces. The assembled genome comprised one circular chromosome of 2.37 Mb. The chromosome harbors 1,941 protein-coding genes.

scholarly journals Complete Genome Sequence of the Yogurt Isolate Lactobacillus delbrueckii subsp. bulgaricus ACA-DC 87

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Voula Alexandraki ◽  
Maria Kazou ◽  
Bruno Pot ◽  
Effie Tsakalidou ◽  
Konstantinos Papadimitriou
Keyword(s):  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Delbrueckii ◽  
Whole Genome ◽  
Whole Genome Analysis ◽  
Content Type ◽  
Lactobacillus Delbrueckii Subsp

ABSTRACT Lactobacillus delbrueckii subsp. bulgaricus is widely used in the production of yogurt and cheese. In this study, we present the complete genome sequence of L. delbrueckii subsp. bulgaricus ACA-DC 87 isolated from traditional Greek yogurt. Whole-genome analysis may reveal desirable technological traits of the strain for dairy fermentations.

scholarly journals Complete Genome Sequence of Akkermansia muciniphila JCM 30893, Isolated from Feces of a Healthy Japanese Male

2020 ◽  
Vol 9 (7) ◽  
Author(s):  
Yusuke Ogata ◽  
Mitsuo Sakamoto ◽  
Moriya Ohkuma ◽  
Masahira Hattori ◽  
Wataru Suda
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Human Gut ◽  
Content Type ◽  
Akkermansia Muciniphila ◽  
Degrading Bacterium ◽  
Japanese Male

Akkermansia muciniphila is an anaerobic and mucin-degrading bacterium in the human gut. Here, we report the complete genome sequence of Akkermansia muciniphila JCM 30893 harboring the plasmid pJ30893.

scholarly journals Complete Genome Sequence of the Sourdough Isolate Lactobacillus zymae ACA-DC 3411

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Maria Kazou ◽  
Voula Alexandraki ◽  
Bruno Pot ◽  
Effie Tsakalidou ◽  
Konstantinos Papadimitriou
Keyword(s):  
Lactic Acid ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Brevis ◽  
Whole Genome ◽  
Adaptive Traits ◽  
Whole Genome Analysis ◽  
Content Type

ABSTRACT Lactobacillus zymae is a Gram-positive lactic acid bacterium belonging to the Lactobacillus brevis clade. Here, we report the first complete genome sequence of L. zymae ACA-DC 3411, which was isolated from traditional Greek wheat sourdough. Whole-genome analysis may reveal adaptive traits of strain ACA-DC 3411 in the sourdough ecosystem.

scholarly journals Genome Sequence of Christensenella minuta DSM 22607T

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Bruce A. Rosa ◽  
Kymberlie Hallsworth-Pepin ◽  
John Martin ◽  
Aye Wollam ◽  
Makedonka Mitreva
Keyword(s):  
Genome Sequence ◽  
Gut Microbiome ◽  
Bacterial Species ◽  
Biological Mechanism ◽  
Valuable Resource ◽  
Human Gut ◽  
Content Type ◽  
Human Gut Microbiome

ABSTRACT Obesity influences and is influenced by the human gut microbiome. Here, we present the genome of Christensenella minuta, a highly heritable bacterial species which has been found to be strongly associated with obesity through an unknown biological mechanism. This novel genome provides a valuable resource for future obesity therapeutic studies.

scholarly journals Complete Genome Sequence of Megamonas funiformis Strain 1CBH44, Isolated from Human Feces

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Yusuke Ogata ◽  
Mitsuo Sakamoto ◽  
Naveen Kumar ◽  
Moriya Ohkuma ◽  
Masahira Hattori ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Rrna Genes ◽  
Trna Genes ◽  
Human Feces ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Content Type

Here, we report the complete genome sequence of Megamonas funiformis strain 1CBH44, which was isolated from the feces of a healthy Japanese person. The genome consists of a circular chromosome (2,310,709 bp, with a GC content of 31.5%) and possesses 2,170 putative protein-coding genes, 18 rRNA genes, and 54 tRNA genes.

scholarly journals Complete Genome Sequence of Paradevosia shaoguanensis Type Strain J5-3, Obtained Using Nanopore and Illumina Sequencing Technologies

2021 ◽  
Vol 10 (23) ◽  
Author(s):  
Yang Wang ◽  
Songxue Wang
Keyword(s):  
Genome Sequence ◽  
Illumina Sequencing ◽  
Genome Analysis ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Culture Collection ◽  
Comparative Genome Analysis ◽  
Content Type ◽  
Sequencing Technologies

The complete genome sequence of Paradevosia shaoguanensis J5-3 T (China General Microbiological Culture Collection Center [CGMCC] 1.12430 T ) is presented here. The complete genome sequence of P . shaoguanensis J5-3 T will provide valuable references for classification and comparative genome analysis.

scholarly journals Complete Genome Sequence of Anaerostipes caccae Strain L1-92T, a Butyrate-Producing Bacterium Isolated from Human Feces

2021 ◽  
Vol 10 (16) ◽  
Author(s):  
Kana Morinaga ◽  
Hiroyuki Kusada ◽  
Miho Watanabe ◽  
Hideyuki Tamaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Human Feces ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

ABSTRACT Anaerostipes caccae strain L1-92T is a well-known butyrate-producing bacterium that has been isolated from human feces. In this announcement, we present the complete genome sequence of A. caccae strain L1-92T, which comprises 3,590,719 bp with a G+C content of 44.30%. The genome harbors 3,369 predicted protein-coding genes.

scholarly journals Complete Genome Sequence of the Human Gut Symbiont Roseburia hominis

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Anthony J. Travis ◽  
Denise Kelly ◽  
Harry J. Flint ◽  
Rustam I. Aminov
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Potential Functions ◽  
Human Feces ◽  
Human Gut ◽  
Coding Sequences

We report here the complete genome sequence of the human gut symbiont Roseburia hominis A2-183 T (= DSM 16839 T = NCIMB 14029 T ), isolated from human feces. The genome is represented by a 3,592,125-bp chromosome with 3,405 coding sequences. A number of potential functions contributing to host-microbe interaction are identified.

scholarly journals Complete Genome Sequence of Alistipes indistinctus Strain 2BBH45, Isolated from the Feces of a Healthy Japanese Male

2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Yusuke Ogata ◽  
Mitsuo Sakamoto ◽  
Moriya Ohkuma ◽  
Masahira Hattori ◽  
Wataru Suda
Keyword(s):  
Gut Microbiota ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Human Gut ◽  
Content Type ◽  
Human Gut Microbiota ◽  
Japanese Male

ABSTRACT The genus Alistipes is one of the members of the human gut microbiota. Here, we report the complete genome sequence of Alistipes indistinctus strain 2BBH45, harboring plasmid p2BBH45.

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