scholarly journals Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems

mSystems ◽  
2020 ◽  
Vol 5 (5) ◽  
Author(s):  
Sarah M. Allard ◽  
Matthew T. Costa ◽  
Ashley N. Bulseco ◽  
Véronique Helfer ◽  
Laetitia G. E. Wilkins ◽  
...  

ABSTRACT Mangrove ecosystems provide important ecological benefits and ecosystem services, including carbon storage and coastline stabilization, but they also suffer great anthropogenic pressures. Microorganisms associated with mangrove sediments and the rhizosphere play key roles in this ecosystem and make essential contributions to its productivity and carbon budget. Understanding this nexus and moving from descriptive studies of microbial taxonomy to hypothesis-driven field and lab studies will facilitate a mechanistic understanding of mangrove ecosystem interaction webs and open opportunities for microorganism-mediated approaches to mangrove protection and rehabilitation. Such an effort calls for a multidisciplinary and collaborative approach, involving chemists, ecologists, evolutionary biologists, microbiologists, oceanographers, plant scientists, conservation biologists, and stakeholders, and it requires standardized methods to support reproducible experiments. Here, we outline the Mangrove Microbiome Initiative, which is focused around three urgent priorities and three approaches for advancing mangrove microbiome research.

2020 ◽  
Vol 8 (1) ◽  
Author(s):  
Asep Awaludin Prihanto ◽  
Hidayatun Muyasyaroh ◽  
Abdul Aziz Jaziri ◽  
Nada Itorul Umam

Protease is an important enzyme widely produced by microorganisms applied in food, health, and industry. Mangrove ecosystem, a rich microorganism habitat, accounted as a new resource for isolating the proteolytic bacteria. The purpose of this study was to identify protease-producing bacteria from mangrove ecosystems in the Tuban area, Indonesia. Three isolates that produced the gelatinase was successfully isolated from mangrove sediments. Bacterial isolates were then tested for extracellular gelatinase. The results showed that isolate T1 had high gelatinase activity. Two isolates (isolates T2 and T3) produced moderately gelatinase enzymes. Molecular identification revealed that isolate T1 is Enterobacter hormaechei.


2018 ◽  
Author(s):  
A.K. Mishra ◽  
K. Manish

AbstractAndaman Islands (AI) of India is a biodiversity hotspot of mangroves but biogeochemical dynamics of AI is less understood. We collected sediment samples of four AI mangrove sites and one site without mangroves for nutrients and trace metal analysis. Samples were collected from each site at the inlet of seawater (Zone A) and the other 500m into the mangrove creek (Zone B). Nutrients (sulphate, ammonium, nitrite and nitrate) levels, organic matter (OM) and carbon content were higher at Zone B of mangrove ecosystem due to the higher OM content from mangrove leaf litter decomposition and microbial degradation. Metal (Pb &Cd) content of zones with and without mangroves were similar and Igeo values indicated moderate contamination of mangrove zones of AI due to lack of anthropogenic pollution. Our results suggest mangrove ecosystems of AI are uncontaminated from heavy metals and are source of nutrients to the oligotrophic coastal ecosystems of Andaman Sea.


2020 ◽  
Vol 5 (1) ◽  
pp. 70-81
Author(s):  
Anang Kadarsah ◽  
Dafiuddin Salim ◽  
Sadang Husain ◽  
Marta Dinata

Its crucial to get information about lead (Pb) heavy metal pollution from mining and oil palm plantation on species density in mangrove ecosystem, to anticipate its impacts. This study aimed is to compare the types and densities of vegetation in mangrove ecosystems allegedly due to mining in Setarap village, Tanah Bumbu Regency and oil palm plantations in Kuala Tambangan Village, Tanah Laut Regency. We also analysis the condition of waters (TDS, pH and DO) and organic content in sediments to acquire data from the South Kalimantan mangrove ecosystems. The results showed there were four species of true mangroves (Avicennia alba, Acanthus ebracteatus, Nypa fruticans and Rhizophora apiculate) could live well in the environment affected by mining or oil palm plantations. The species density for trees was low (933 ind/ha) for mangroves affected by coal mines, while those affected by oil palm plantations had higher densities (1,067 ind/ha). pH value of waters in affected area by coal mining showed more acidic value (pH 5.76) especially at the back, while those by palm oil plantations are more acidic (pH 6) in the estuary. Organic matter content in sediments affected by coal mines was in the range of 0.61-6.59%, while those affected by oil palm plantations showed higher values (0.12-2.19%). Lead heavy metal content (Pb) in waters affected by coal mines was 0.031-0.056 mg/L, while the area affected by oil palm plantations was of higher value (0.110-0.128 mg/L). Lead (Pb) levels in sediments indicate higher values than waters, which reach 3.512-6.046 mg/Kg (affected by coal mines), and in areas affected by oil palm plantations reaching 6.658-6.66 mg/Kg. The general conclusion is that vegetation densities in areas affected by coal mines are lower than oil palm plantations. The level of lead  (Pb) pollution in the sediments is higher than in the waters.


2021 ◽  
Vol 748 (1) ◽  
pp. 012017
Author(s):  
E Wahyuni ◽  
Zulhafandi ◽  
Hendris ◽  
Jarin

Abstract Mangrove forests are natural resources in coastal areas that have an important role in terms of social, economic and ecological aspects. However, the utilization of the mangrove ecosystem makes it vulnerable to damage. This study aims to determine the level of public knowledge of the economic, ecological benefits and damage that happened to mangrove areas in Tarakan City. The scoring method was used to determine the total score or the total score of the respondents’ answers, which amount to 50 people. that the community’s knowledge of the economic benefits of mangrove forests was categorized as know for the benefits of mangroves as firewood, mangrove areas as a place for settlement, mangroves as a place to get fish and mangrove benefits as aquaculture areas with total scores of 226, 200, 232,230 respectively. However, the level of community knowledge about the benefits of mangroves as a medicinal ingredient obtained a total score of 164, which means the level of community knowledge was in the doubtful category. While the level of community knowledge of the ecological benefits of mangrove forests as coastline guards, sea wave barriers, sea wind protectors, and animal breeding sites were included in the category of “Know” with a total score of 228, 224, 234, 240 respectively, but the level of knowledge The community regarding the benefits of mangroves that can manage household waste was in the “doubtful” category with a total score of 128. The community was aware of the damage to mangrove forest ecosystems caused by garbage, logging / mangroves, expanding aquaculture, settlements and increasing population. with a total score of 234,232, 210,228 and 200 levels of knowledge, respectively, which are included in the “Know” category.


2016 ◽  
Vol 1 (2) ◽  
pp. 64-73
Author(s):  
Desi Fitriana ◽  
Yar Johan ◽  
Person Pesona Renta

The purpose of this study was to identify the potential of mangrove ecosystems as mangrove ecotourism objects and calculate suitability mangrove ecotourism in the village Kahyapu Enggano . This research was conducted using survey methods, measurements in the field and ecological suitability determination based on the multiplication of weights and scores obtained from any of the parameters consisting of five parameters: the thickness of the mangrove , mangrove density , types of mangrove , tidal and biota object . Mangrove ecosystem in the Village Kahyapu Enggano has the potential to be developed as an ecotourism mangrove . Based on the results, the results of IKW ( Travel Suitability Index ) at the stations I 60 % category S2 (Match ) , Station II 66 % category S2 (Match ) and Station III 71 % category S2 (Match ).


2020 ◽  
Vol 21 (5) ◽  
Author(s):  
Rochadi Kristiningrum ◽  
Abubakar M. Lahjie ◽  
MASJAYA ◽  
SYAHRIR YUSUF ◽  
YOSEP RUSLIM ◽  
...  

Abstract. Kristiningrum R, Lahjie AM, Masjaya, Yusuf S, Ruslim Y, Ma’ruf A. 2020. Fauna diversity, production potential and total economic value of mangrove ecosystems in Mentawir Village, East Kalimantan, Indonesia. Biodiversitas 21: 1940-1953. Mangroves play important role in life. The benefits of the mangrove ecosystem consist of ecological and socio-economic values. However, it is a challenge to discern how the mangrove ecosystem provides a comprehensive economic value. This research is aimed to analyze the Total Economic Value (TEV) of mangrove ecosystems in Mentawir Village, North Penajam Paser District, East Kalimantan Province. This aim will be achieved by conducting fauna inventory, analysis of mangrove wood production potential, social-economic interviews, and infrastructure cost analysis as the inputs to calculate four elements (i.e. Direct Use Value, Indirect Use Value, Option Value, and Existence Value) to sum up the TEV. The research used a mixed-method combining both qualitative and quantitative methods. Fauna inventory was conducted using boat survey method and interviews with local fishermen. Data on mangrove wood production was obtained using the systematic random sampling method by establishing two plots with an area of one hectare for each plot to calculate mean annual increment (MAI) and current annual increment (CAI). The economic value of the mangrove ecosystem was calculated using market price values, replacement costs, and the Contingent Valuation Method (CVM). The results of fauna inventory consisted of 3 species of mammals, 1 species of reptile, 16 species of birds, 25 types of fish, 8 species of crustaceans, and 7 species of mollusks. The economic valuation resulted in the contribution of direct use value with 39.56% in the form of wood (94,875,000,000 IDR) and fishery products (103,500,000,000 IDR); indirect use value with 53.47% in the form of breakwater (38,028,881,407 IDR), abrasion resistance (218,549,528,110 IDR), and carbon sequestration (11,580,313,067); option value with 6.92% in the form of biodiversity (34,690,085,038 IDR); and existence value with 0.05% (241,500,000 IDR). All these resulted in the total economic value (TEV) of the mangrove ecosystem in Mentawir Village of 501,465,307,621 IDR. Therefore, this value can be the basis for policymakers in managing natural resources so that the ecosystem is more protected and sustainable, and can continue to provide environmental services for the welfare of the community.


2020 ◽  
Vol 5 (1) ◽  
pp. 64-77
Author(s):  
Djainudin Alwi ◽  
Sandra Hi. Muhammad ◽  
Henderson Herat

Ekosistem mangrove berperan sebagai habitat berbagai jenis satwa, salah satunya yaitu makrozoobenthos. Makrozoobenthos berperan sebagai konsumen primer dan ada pula yang berperan sebagai konsumen sekunder atau konsumen yang menempati tempat yang lebih tinggi. Pada umumnya, Makrozoobenthos merupakan makanan alami bagi berbagai satwa perairan yang berukuran besar. Penelitian ini bertujuan menganalisis kelimpahan makrozoobenthos dan menganalisis struktur komunitas makrozoobenthos di kawasan ekosistem mangrove Daruba Pantai. Penelitian ini dilaksanakan pada bulan November sampai Desember 2019 yang berlokasi di kawasan Mangrove Desa Daruba Pantai. Pengambilan data menggunakan metode sampel kuadrat (Quadrat Sampling) dengan ukuran plot 1x1 m2. Metode analisis data menggunakan analisis indeks ekologi seperti kelimpahan individu, kelimpahan relatif, keanekaragaman jenis, keseragaman dan dominasi. Hasil penelitian menunjukan kelimpahan individu makrozoobenthos tertinggi berada pada stasiun ke I yaitu 33,333 (Ind/m2) dan terendah berada di stasiun I dan II yaitu Polymesoda bengalensis 1,111 (Ind/m2). Sedangkan Kelimpahan Relatif tertinggi ada di stasiun II yaitu Episesarma (0,200 %) dan terendah ada di stasiun I dan II yaitu Polymesoda bengalensis (0,007 %). Hasil analisis indeks ekologi Keanekragaman (H’) stasiun I yaitu (2,146), stasiun II (2,158) dan stasiun III (2,131) termasuk dalam kategori sedang. Indeks Keseragaman (E) pada stasiun I berkisar (0,895), stasiun II (0,900), sedangkan pada stasiun III (0,925) termasuk dalam kategori tinggi. Indeks Dominasi pada stasiun I yaitu (0,132), stasiun II (0,132) dan pada stasiun III yaitu (0,130) termasuk dalam kategori rendah.THE DIVERSITY AND ABUNDANCE OF MACROZOOBENTHOS IN MANGROVE ECOSYSTEMS AT DARUBA VILLAGE COASTAL PULAU MOROTAI REGENCY. Mangrove ecosystems play a role as a habitat for various species of animals, one of which is macrozoobenthos. Macrozoobenthos acts as the primary consumer and some have a role as secondary consumers or consumers who occupy a higher place. In general, Macrozoobenthos is a natural food for a variety of large aquatic animals. This research aims to analyze the abundance of macrozoobenthos and analyze the structure of the macrozoos community in the area of the Daruba Coastal mangrove ecosystem. This research was conducted from November to December 2019 located in the Mangrove area of Daruba Pantai Village. Retrieval of data using the method of quadratic sampling (Quadrat Sampling) with a plot size of 1x1 m2. Data analysis methods use ecological index analysis such as individual abundance, relative abundance, species diversity, uniformity, and dominance. The results showed the highest abundance of macrozoobenthos individuals were at a station I which was 33,333 (Ind / m2) and the lowest was at stations I and II namely Polymesoda bengalensis 1.111 (Ind / m2). While the highest relative abundance in at station II, Episesarma (0.200%) and the lowest are at a station I and II, Polymesoda bengalensis (0.007%). The results of the analysis of the Ecological diversity index (H ') of Station I, namely (2,146), Station II (2,158) and Station III (2,131) are included in the medium category. The Uniformity Index (E) at a station I ranges (0.895), station II (0.900), while at station III (0.925) is included in the high category. The Domination Index at a station I (0.132), station II (0.132) and at station III (0.130) are in a low category.


2014 ◽  
Vol 6 (2) ◽  
pp. 101-108 ◽  
Author(s):  
Choshin Haneji ◽  
Van Tu Do ◽  
Duc Loi Vu ◽  
Tuan Hung Duong

Biodiversity indicators for the conservation of mangrove ecosystems of Xuan Thuy National Park were composed, taking into account the environmental, biotic, and anthropological factors, based on suggested indicators provided by the Convention on Biological Diversity. Relevant environmental, biotic, and anthropological factors, identified by bibliographic and field surveys, were ordered by Pressures, State, Benefits, and Responses categories following the guidance of the Biodiversity Indicators Partnership. Furthermore, the linked relationships among the indicators were identified for effective monitoring of biodiversity in Xuan Thuy National Park. Dựa trên các chỉ thị được gợi ý từ Công ước về Đa dạng sinh học, các chỉ thị đa dạng sinh học phục vụ công tác bảo tồn các hệ sinh thái rừng ngập mặn của Vườn Quốc gia Xuân Thủy đã được xây dựng, có tính đến các yếu tố môi trường, sinh học và con người. Các yếu tố môi trường, sinh học và con người có liên quan, được xác định bằng việc tổng hợp và đánh giá các tài liệu và các đợt điều tra ngoài thực địa, dưới trật tự các nhóm Áp lực, Tình trạng, Lợi ích và Đáp ứng theo hướng dẫn của Đối tác chỉ thị đa dạng sinh học. Hơn thế nữa, các mối quan hệ liên kết giữa các chỉ thị đã được xác định nhằm quan trắc hiệu quả đa dạng sinh học ở Vườn Quốc gia Xuân Thủy.


2018 ◽  
Vol 4 (1) ◽  
pp. 61
Author(s):  
Ajizatunnisa Ajizatunnisa ◽  
Sri Wahyuni ◽  
Lud Waluyo ◽  
Fuad Jaya Miharja

The purpose of this development study is to develop research-based booklet for the identification of fiddler crab (Uca spp.) diversity. Some people do not yet know the ecological benefits of fiddler crabs. This is apparent when some people take fiddler crabs to serve as decorative crabs. The product specifications expected in the development of this medium are booklets. Therefore, it takes a companion learning media that can lead the local community to implement self-learning in the form of booklet because their interest of reading is very less, especially when reading a book that is colorless and has a lot of words. Booklet that is packed with interesting and accompanied by pictures is an alternative solution. The development method used in the research is Exploration, Explanation, and Evaluate (3E) model. The research was conducted by developing the research result into a booklet based on the diversity of fiddler crabs in mangrove ecosystem. The booklet validation consists of two lecturers from the Department of Biology Education at the University of Muhammadiyah Malang which is a material expert and learning media expert. The result of this research is booklet very valid with the percentage of material expert validity 81.25% and learning media expert 95.13%.


2020 ◽  
Vol 21 (8) ◽  
Author(s):  
AARON FROILAN RAGANAS ◽  
ANNALEE S. HADSALL ◽  
NELSON M. PAMPOLINA ◽  
STEFAN HOTES ◽  
DAMASA B. MAGCALE-MACANDOG

Abstract. Raganas AFM, Hadsall AS, Pampolina NM, Hotes S, Magcale-Macandog DB. 2020. Regeneration capacity and threats to mangrove areas on the southern coast of Oriental Mindoro, Philippines: Implications to mangrove ecosystem rehabilitation. Biodiversitas 21: 3625-3636. Regeneration capacity is important as it determines the fate of an ecosystem. This study assessed six mangrove areas in the southern coast of Oriental Mindoro, Philippines to evaluate their regeneration capacity status. Four mangrove ecotypes were delineated namely seaward, middle, landward and riverine zones at each mangrove ecosystem, where dominant mangrove species were identified and selected for regeneration capacity study. Three subplots measuring 1 x 1 m2 were laid within the five 10 x 10 m2 survey plots established per zone. The juveniles were counted and categorized according to their height classes, using linear regeneration sampling method; where: RCI (≤40 cm) considered seedlings; RCII (41-150 cm) as saplings; and RCIII (151-≤300 cm) as small trees. Potential threats both anthropogenic and natural were determined through key informant interviews. Seven dominant species were identified across ecotypes in all mangrove sites, namely Avicennia marina, Avicennia rumphiana, Ceriops decandra, Rhizophora apiculata, Rhizophora mucronata, Sonneratia alba, and Xylocarpus granatum. RCI (seedlings) is the most abundant across mangrove sites irrespective of the dominant species. Fishpond operation within the mangrove stand is considered a major threat to the juveniles and most mangrove ecosystems. Therefore, protection and constant monitoring of these mangrove ecosystems are necessary to ensure regeneration success in the future.


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