Tigers of the World: Genomics and Conservation

2019 ◽  
Vol 7 (1) ◽  
pp. 521-548 ◽  
Author(s):  
Shu-Jin Luo ◽  
Yue-Chen Liu ◽  
Xiao Xu

Of all the big cats, or perhaps of all the endangered wildlife, the tiger may be both the most charismatic and most well-recognized flagship species in the world. The rapidly changing field of molecular genetics, particularly advances in genome sequencing technologies, has provided new tools to reconstruct what characterizes a tiger. Here we review how applications of molecular genomic tools have been used to depict the tiger's ancestral roots, phylogenetic hierarchy, demographic history, morphological diversity, and genetic patterns of diversification on both temporal and geographical scales. Tiger conservation, stabilization, and management are important areas that benefit from use of these genome resources for developing survival strategies for this charismatic megafauna both in situ and ex situ.

2021 ◽  
Author(s):  
Barney Long ◽  
Richard P. Young

Competence frameworks are widely used in many professional sectors, helping to develop capacity by defining and recognising the required skills, knowledge and personal attributes. Registers of competences have been developed within the conservation sector. A global register of competences for threatened species recovery practitioners is a register of competences in the form of a directory of the possible skills, knowledge and personal attributes required by practitioners working in threatened species recovery programmes around the world, in both in-situ and ex-situ contexts. This register has the potential to transform approaches to capacity development within threatened species recovery and help improve the effectiveness of this branch of conservation. Its structure largely follows that of A global register of competences for protected area practitioners (Appleton, 2016).


2018 ◽  
Vol 53 (4) ◽  
pp. 405-418 ◽  
Author(s):  
Patrick Beyerlein ◽  
Henrique dos Santos Pereira

Abstract: The objective of this work was to select an optimal set of morphological descriptors, in order to characterize the phenotipical diversity of Amerindian yam (Dioscorea trifida) landraces cultivated in the municipality of Caapiranga, in the central Amazon region of Brazil, and to develop a botanical identification key for them. A collection of 140 accessions and an experimental plot with a representative sample of 20 landraces were used to test 64 morphological descriptors for the aerial and subterranean plant parts. Forty-eight descriptors were selected, of which 13 were for tubers, 12 for stems, 14 for leaves, and 9 for inflorescences and seed. A cluster analysis based on the morphological data showed the formation of two landrace groups with greater similarity: white and purple pulp tubers. The results provide tools for in situ and ex situ conservation and for plant breeding programs, considering the importance of maintaining and recognizing the value of Ameridian yam as an important native genetic resource for food security in the region.


2002 ◽  
pp. 18-29
Author(s):  
Imre Bodó

Since the 1992 Rio de Janeiro UNO Congress domestic animals belong also officially to the genetic diversity of the world. Non commercial domestic animal breeds should be maintained for many cultural and technical reasons. Conservation and preservation of living beings is nowadays in the programme of many regional, national and international organizations.The preservation of domestic animals is possible in situ (at the original place and conditions) and ex situ (by cryogenic methods).There are three era in the history of preservation of domestic animals: the epoch of spontaneous maintenance, the period of sporadic national activities and the era of international programme.Some of the questions to be solved by scientific research: the principles of selection of the candidate populations for maintenance, the different degrees of endangeredness, the necessary population size to be subsidized, the problem of inbreeding, the best mating systems etc.In Hungary the maintenance of endangered domestic animal breeds is based upon the low.The following breeds are on the list of protected breeds:− the Hungarian Grey cattle,− the Lipizzan, Shagya, Nonius, Gidran, Furioso,Kisbér Halfbred, Murinsulaner and Hucul horses,− the Racka, Tsigai and Cikta sheep,− the Mangalitsa pig,− the Hungarian yellow, white, speckled and the Transsylvanian naked necked hen,− the Bronze Turkey,− the Frizzle Feathered goose.Hopefully in the near future the breeders of traditional domestic animal breeds will find the possible niches for their special products.


2021 ◽  
Vol 273 ◽  
pp. 01007
Author(s):  
Valentina Puzirnova ◽  
Natalia Doroshenko

The paper is devoted to the problem of plant biodiversity conservation. This problem is acute all over the world. Lower Don Region has a centuries old history of viticulture and winemaking. There are many valuable vine varieties which are worthy of preservation for future generations. Classical methods no longer cope with this task. Applying advances of biotechnology in addition to traditional methods of ex situ and in situ biodiversity conservation allows sustainable management of genetic resources. This article summarizes the study of methods for creation slow growing collection for grapevine variety Fioletoviy Ranniy. Keeping plants in a slow-growing collection is one of the best ways to preserve biodiversity. This study analyzed the effect of various media compounds on vigor of vine in order to elongate the time between replantings.


2021 ◽  
Vol 10 (2) ◽  
pp. 128-130
Author(s):  
H.D.C. Soysa ◽  
U.S.B. Hettige ◽  
M.G. Cooray ◽  
D.R. Vidanapathirane

Nearly one in every five species of reptiles in the world is threatened with extinction and thus is conservation dependent. In order to develop effective and targeted species conservation strategies, detailed information on their distribution, systematics and ecology are necessary. Information such as the natural history and in-situ reproductive behaviors would be crucial for highly threatened species that require ex-situ conservation measures. Agamid lizards are a major component of the global reptile diversity and a significant number are threatened due to habitat loss and other threats such as smuggling.


2018 ◽  
Vol 48 (1) ◽  
pp. 1-9
Author(s):  
Lúcia Vieira HOFFMANN ◽  
Kálita Cristina Moreira CARDOSO ◽  
Antônio Sabino Neto da Costa ROCHA ◽  
Aryanny Irene Domingues de OLIVEIRA ◽  
Aluana Gonçalves ABREU ◽  
...  

ABSTRACT The Amazon Basin is a center of diversity of Gossypium barbadense and the strategy for conservation of this genetic resource depends on the knowledge of the diversity maintained in Amazonas State. During two expeditions, in 2012 and 2014, plants were collected in ten municipalities in the state of Amazonas, in the central Brazilian Amazon region. The molecular diversity was estimated by SSR markers for 50 samples collected in 2012. The morphological diversity of 24 plants collected in 2014 was assessed ex situ and compared to that of 50 plants of the same and other cotton varieties from other Brazilian states. Most of plants evaluated in situ in Amazonas had purple petioles and veins (82%), associated to medicinal use, and kidney seeds (78%). The ex situ morphological analysies showed that G. barbadense plants from the Amazonas state: i) presented higher similarity to cotton plants from other northern Brazilian states, and ii) were grouped separately from those of other northern Brazilian states by descriptor analysis. Both the molecular (H=0.41) and morphological (H=0.38±0.02) diversity among the collected plants was considered intermediary. Our study indicates the distinctiveness of Amazon cottons, and contributes to demonstrate the discrimination power of multicategorical traits.


Author(s):  
V. P. Tkach ◽  
S. A. Los ◽  
N. Yu. Vysotska ◽  
L. I. Tereshchenko ◽  
L. O. Torosova

The aim of the article is to generalize the information presented in the FAO report ‘The State of World Forest Genetic Resources (FGR) and in the reports on the state of forest genetic resources in Ukraine and other countries. Results and Discussion. To draw up the World Report, the information was provided by 86 countries which occupy 76% of the earth's surface and involve 85% of the total forest area. The countries’ reports cover 8,000 species of trees, palm trees and bamboo, among which about 2,400 are economically important; at that, information at the genetic level is only available for 500 to 600 species. The vast majority of important for environmental protection species (84%) are indigenous, in contrast to those economically important, 85% of which are introduced species. About 50 indigenous and non-native species of forest trees are used in the forestry of Ukraine. 26 of them are given as high-priority ones. They are used to produce wood, pulp, fuel, non-timber products, as well as to create protective plantations. The total number of species and subspecies in the world that are preserved in situ is almost 1,000, with about 500 of them – in Asia and almost 200 in both Europe and Africa. In Ukraine, there are about 30 of such species. In cases where in situ conservation is problematic, alternative methods are used, namely ex situ. The total number of species that are conserved ex situ is 1,800; at that, 1,025 of them grow in Africa, 401 – in Europe, 389 – in Asia, 372 – in Latin America and the Caribbean, 265 – in North America, 102 – in the Middle East and 57 species – in Oceania. In Ukraine, they make a stock of the seeds of more than 130 tree and shrub species, including decorative ones. Man-made forests are created with more than 20 species of trees annually. Non-native species of woody plants in the forestry of Ukraine make 39%. Methodological approaches to the study of genetic variability involve analysis of biometric, morphological and biochemical characteristics, as well as DNA markers. They analyze genetic variation as in field studies in provenance trail and progeny tests, so in laboratory studies. Conclusions. The basic tasks for the forest genetic resources conservation is to develop and implement national in situ and ex situ conservation strategies for sustainable use of FGR, to strengthen the role which forests and protective stands play in the in situ FGR conservation, and to identify first-priority measures at the species level. FGR conservation strategies should contribute to both ecosystem restoration using appropriate genetic material and adaptation to climate change along with mitigating its impacts.


2001 ◽  
Vol 79 (2) ◽  
pp. 131-138 ◽  
Author(s):  
Francisco Molina-Freaner ◽  
Patricia Delgado ◽  
Daniel Piñero ◽  
Nidia Perez-Nasser ◽  
Elena Alvarez-Buylla

Mexico is a major center of diversity for the genus Pinus as it has the greatest number of species in the world. Many species are now restricted to Mexico, and some are represented by very small populations and are in danger of extinction. In this study we examined allozyme variation in three rare species of Mexican pines: Pinus pinceana Gord., Pinus lagunae M.F. Passini, and Pinus muricata D. Don, with the objective of providing conservation guidelines. The three species had relatively high levels of genetic variation with mean expected heterozygosities of 0.373, 0.386, and 0.346 for P. pinceana, P. lagunae, and P. muricata, respectively. We found marked differentiation among populations and significant inbreeding within populations of the three species. These values are larger than the range reported for most conifers and suggest that conservation strategies of these rare pines require focusing on the viability of several populations. Given that our knowledge about the demographic status of the three species is scarce, we propose a mixed strategy of conservation. For P. lagunae, we propose an in situ strategy, whereas for P. pinceana and P. muricata we propose an ex situ strategy of conservation until permanent protection can be provided for several of their populations.Key words: genetic structure, conservation, rare pines, Pinus pinceana, Pinus lagunae, Pinus muricata.


Author(s):  
D. Loretto ◽  
J. M. Gibson ◽  
S. M. Yalisove ◽  
R. T. Tung

The cobalt disilicide/silicon system has potential applications as a metal-base and as a permeable-base transistor. Although thin, low defect density, films of CoSi2 on Si(111) have been successfully grown, there are reasons to believe that Si(100)/CoSi2 may be better suited to the transmission of electrons at the silicon/silicide interface than Si(111)/CoSi2. A TEM study of the formation of CoSi2 on Si(100) is therefore being conducted. We have previously reported TEM observations on Si(111)/CoSi2 grown both in situ, in an ultra high vacuum (UHV) TEM and ex situ, in a conventional Molecular Beam Epitaxy system.The procedures used for the MBE growth have been described elsewhere. In situ experiments were performed in a JEOL 200CX electron microscope, extensively modified to give a vacuum of better than 10-9 T in the specimen region and the capacity to do in situ sample heating and deposition. Cobalt was deposited onto clean Si(100) samples by thermal evaporation from cobalt-coated Ta filaments.


Author(s):  
K. Barmak

Generally, processing of thin films involves several annealing steps in addition to the deposition step. During the annealing steps, diffusion, transformations and reactions take place. In this paper, examples of the use of TEM and AEM for ex situ and in situ studies of reactions and phase transformations in thin films will be presented.The ex situ studies were carried out on Nb/Al multilayer thin films annealed to different stages of reaction. Figure 1 shows a multilayer with dNb = 383 and dAl = 117 nm annealed at 750°C for 4 hours. As can be seen in the micrograph, there are four phases, Nb/Nb3-xAl/Nb2-xAl/NbAl3, present in the film at this stage of the reaction. The composition of each of the four regions marked 1-4 was obtained by EDX analysis. The absolute concentration in each region could not be determined due to the lack of thickness and geometry parameters that were required to make the necessary absorption and fluorescence corrections.


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