New and noteworthy species of white Entoloma (Agaricales, Entolomataceae) in China

Phytotaxa ◽  
2015 ◽  
Vol 205 (2) ◽  
pp. 99 ◽  
Author(s):  
Xiao-Lan He ◽  
Tai-Hui Li ◽  
Wei-Hong Peng ◽  
Bing-Cheng Gan
Keyword(s):  
Phylogenetic Analysis ◽  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Large Subunit ◽  
Monophyletic Group ◽  
Southwestern China ◽  
High Altitudes ◽  
Internal Transcribed Spacer Region ◽  
The Common

Three species of Entoloma with white basidioma in subgenus Alboleptonia from China are reported in this paper. Entoloma crocotillum is described as new to science from high altitudes in southwestern China. It is characterized by the small, white to pinkish pileus covered with matted-appressed fibrils, relatively large basidiospores with 5–6 angles, and the common presence of clamp-connections. Entoloma sulcatum, a new Chinese record, and E. stylophorum are documented based on new collections. Additionally, ITS (internal transcribed spacer region), nLSU (nuclear large subunit), and RPB2 (RNA polymerase II second largest subunit) sequences of E. crocotillum were successfully generated, and the phylogenetic positions of the three species among Alboleptonia species and other entolomatoid groups are preliminarily analyzed based on the combined nLSU and RPB2 dataset. The phylogenetic analysis showed that E. crocotillum is most closely related to E. sericellum and that Alboleptonia is not a monophyletic group.

Inocybe griseorubida, a new species of Pseudosperma clade from tropical India

Phytotaxa ◽  
2015 ◽  
Vol 221 (2) ◽  
pp. 166 ◽  
Author(s):  
K. P. Deepna Latha ◽  
Patinjareveettil Manimohan
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Large Subunit ◽  
Similar Species ◽  
Internal Transcribed Spacer Region ◽  
Comprehensive Description ◽  
Kerala State ◽  
A New Species

Inocybe griseorubida sp. nov. is described from Kerala State, India. A comprehensive description, photographs, and comparisons with phenetically similar species are provided. The nuclear ribosomal internal transcribed spacer region (ITS), a portion of the nuclear ribosomal large subunit (nLSU) and a portion of the nuclear second-largest subunit of RNA polymerase II (rpb2) gene of this species were sequenced and analyzed. Phylogenetic analysis of rpb2 sequences confirmed both the novelty of the species and its placement within the Pseudosperma clade.

A new species of Inocybe representing the Nothocybe lineage

Phytotaxa ◽  
2016 ◽  
Vol 267 (1) ◽  
pp. 40 ◽  
Author(s):  
K. P. DEEPNA LATHA ◽  
PATINJAREVEETTIL MANIMOHAN ◽  
P. BRANDON MATHENY
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Large Subunit ◽  
Internal Transcribed Spacer Region ◽  
Comprehensive Description ◽  
Line Drawings ◽  
Kerala State ◽  
A New Species

Inocybe distincta sp. nov. is described from Kerala State, India. A comprehensive description, photographs, line drawings and comments are provided. The nuclear ribosomal internal transcribed spacer region (ITS), a portion of the nuclear ribosomal large subunit (nrLSU) and a portion of the nuclear second-largest subunit of RNA polymerase II (RPB2) gene of this species were sequenced and analyzed. BLASTn searches using nrLSU and RPB2 sequences and subsequent ML phylogenetic analysis of combined nrLSU and RPB2 sequences confirmed that Inocybe distincta is a representative of the Nothocybe lineage. As the Nothocybe lineage is assumed to have affinities to I. cutifracta, and as there are different interpretations of that species, we examined the holotype of I. cutifracta collected by T. Petch and another collection from Sri Lanka identified as I. cutifracta by D. N. Pegler, and we present here our observations on these collections.

scholarly journals Description of Lepiotaceous Fungal Species of the Genera Chlorophyllum, Clarkeinda, Macrolepiota, Pseudolepiota, and Xanthagaricus, from Laos and Thailand

Diversity ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 666
Author(s):  
Phongeun Sysouphanthong ◽  
Naritsada Thongklang ◽  
Jian-Kui Liu ◽  
Else C. Vellinga
Keyword(s):  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Fungal Species ◽  
Ongoing Research ◽  
Line Drawings ◽  
Dna And Rna ◽  
First Time

In our ongoing research on lepiotaceous taxa (Agaricaceae s.l.) in Laos and northern Thailand, we focus here on Chlorophyllum, Clarkeinda, Macrolepiota, Pseudolepiota, and Xanthagaricus. Collections were obtained from various habitats, including agricultural habitats, grasslands, and rainforests. A total of 12 taxa were examined and investigated. Of these 12, two are new for science; viz. Xanthagaricus purpureosquamulosus with brownish-grey to violet-brown squamules on a pale-violet to violet background; it shares the pileus color with X. caeruleus and X. ianthinus, but differs in other characters; and Macrolepiota excelsa, rather similar to M. procera but related toM. detersa. Two species, Pseudolepiota zangmui and Xanthagaricus necopinatus are recorded for the first time in Thailand. Four species of Chlorophyllum and a total of four species of Macrolepiota were found, viz., C. demangei and C. hortense with white basidiospores, C. molybdites and C. globosum with green basidiospores, M. detersa, M. dolichaula, the new M. excelsa, and M. velosa. Another rather common striking species is Clarkeinda trachodes, with yellow-green basidiospores. Each species is described in detail, with color photographs and line drawings. Phylogenetic analyses based on internal transcribed spacer (nrITS) region, the large subunit nuclear ribosomal (nrLSU) DNA and RNA polymerase II second largest subunit (rpb2) genes provide evidence for the placement of the species covered.

scholarly journals Unveiling the Hidden Diversity of Rock-Inhabiting Fungi: Chaetothyriales from China

2020 ◽  
Vol 6 (4) ◽  
pp. 187
Author(s):  
Wei Sun ◽  
Lei Su ◽  
Shun Yang ◽  
Jingzu Sun ◽  
Bingjie Liu ◽  
...  
Keyword(s):  
New Species ◽  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Morphological Characteristics ◽  
Small Subunit ◽  
Internal Transcribed Spacer Region ◽  
Natural Rock ◽  
Rock Inhabiting Fungi

Rock-inhabiting fungi (RIF) are nonlichenized fungi that naturally colonize rock surfaces and subsurfaces. The extremely slow growth rate and lack of distinguishing morphological characteristics of RIF resulted in a poor understanding on their biodiversity. In this study, we surveyed RIF colonizing historical stone monuments and natural rock formations from throughout China. Among over 1000 isolates, after preliminary delimitation using the internal transcribed spacer region (ITS) sequences, representative isolates belonging to Trichomeriaceae and Herpotrichiellaceae were selected for a combined analysis of ITS and the nuclear ribosomal large subunit (nucLSU) to determine the generic placements. Eight clades representing seven known genera and one new genus herein named as Anthracina were placed in Trichomeriaceae. While, for Herpotrichiellaceae, two clades corresponded to two genera: Cladophialophora and Exophiala. Fine-scale phylogenetic analyses using combined sequences of the partial actin gene (ACT), ITS, mitochondrial small subunit ribosomal DNA (mtSSU), nucLSU, the largest subunit of RNA polymerase II (RPB1), small subunit of nuclear ribosomal RNA gene (SSU), translation elongation factor (TEF), and β-tubulin gene (TUB) revealed that these strains represented 11 and 6 new species, respectively, in Trichomeriaceae and Herpotrichiellaceae. The 17 new species were described, illustrated for their morphologies and compared with similar taxa. Our study demonstrated that the diversity of RIF is surprisingly high and still poorly understood. In addition, a rapid strategy for classifying RIF was proposed to determine the generic and familial placements through preliminary ITS and nucLSU analyses, followed by combined analyses of five loci selected from ACT, ITS, mtSSU, nucLSU, RPB1, and/or the second subunit of RNA polymerase II gene (RPB2), SSU, TEF, and TUB regions to classify RIF to the species level.

scholarly journals New Coelomycetous Fungi from Freshwater in Spain

2021 ◽  
Vol 7 (5) ◽  
pp. 368
Author(s):  
Viridiana Magaña-Dueñas ◽  
Alberto Miguel Stchigel ◽  
José Francisco Cano-Lira
Keyword(s):  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Pure Culture ◽  
Internal Transcribed Spacer ◽  
Novel Species ◽  
Phylogenetic Study ◽  
Plant Debris ◽  
Internal Transcribed Spacer Region ◽  
Freshwater Habitats ◽  
Freshwater Environments

Coelomycetous fungi are ubiquitous in soil, sewage, and sea- and freshwater environments. However, freshwater coelomycetous fungi have been very rarely reported in the literature. Knowledge of coelomycetous fungi in freshwater habitats in Spain is poor. The incubation of plant debris, from freshwater in various places in Spain into wet chambers, allowed us to detect and isolate in pure culture several pycnidia-producing fungi. Fungal strains were phenotypically characterized, and a phylogenetic study was carried out based on the analysis of concatenated nucleotide sequences of the D1–D2 domains of the 28S nrRNA gene (LSU), the internal transcribed spacer region (ITS) of the nrDNA, and fragments of the RNA polymerase II subunit 2 (rpb2) and beta tubulin (tub2) genes. As a result of these, we report the finding of two novel species of Neocucurbitaria, three of Neopyrenochaeta, and one of Pyrenochaetopsis. Based on the phylogenetic study, we also transferred Neocucurbitaria prunicola to the genus Allocucurbitaria. This work makes an important contribution to the knowledge of the mycobiota of plant debris in freshwater habitats.

Hygrophorus parvirussula sp. nov., a new edible mushroom from southwestern China

Phytotaxa ◽  
2018 ◽  
Vol 373 (2) ◽  
pp. 139 ◽  
Author(s):  
HONG-YAN HUANG ◽  
SHU-DA YANG ◽  
NIAN-KAI ZENG ◽  
GUO-LI ZHANG ◽  
YU HU ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Internal Transcribed Spacer ◽  
Edible Mushroom ◽  
Southwestern China ◽  
Phylogenetic Species ◽  
Internal Transcribed Spacer Region ◽  
A New Species

A Chinese species of Hygrophorus with a purplish red or pinkish red pileus, treated as “H. russula” is taxonomically reevaluated, including sequences of “H. russula” from GenBank. Phylogenetic analysis of the internal transcribed spacer region indicated that “H. russula” from different continents is a complex of at least eight phylogenetic species. Chinese entities are distinct from previously described species of Hygrophorus, including the European H. russula. Therefore, we describe it as a new species, namely H. parvirussula sp. nov., which differs from H. russula by its smaller basidiomata, slightly larger basidiospores, and the presence of cheilocystidia and pleurocystidia.

scholarly journals New taxa in Glomeromycota: Polonosporaceae fam. nov., Polonospora gen. nov., and P. polonica comb. nov.

2021 ◽  
Vol 20 (8) ◽  
pp. 941-951
Author(s):  
Janusz Błaszkowski ◽  
Piotr Niezgoda ◽  
Edward Meller ◽  
Paweł Milczarski ◽  
Szymon Zubek ◽  
...  
Keyword(s):  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
New Taxa ◽  
Internal Transcribed Spacer ◽  
New Genus ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Small Subunit ◽  
Worldwide Distribution ◽  
New Family

AbstractPhylogenetic analyses of sequences of the nuc rDNA small subunit (18S), internal transcribed spacer (ITS1-5.8S-ITS2 = ITS), and large subunit (28S) region (= 18S-ITS-28S), as well as sequences of this region concatenated with sequences of the largest subunit of RNA polymerase II (RPB1) gene, proved that the species originally described as Acaulospora polonica (phylum Glomeromycota) represents a new genus and a new family of the ancient order Archaeosporales, here introduced into the Glomeromycota under the names Polonospora and Polonosporaceae, respectively. The phylogenetic analyses and BLASTn queries also indicated that the Polonosporaceae with P. polonica comb. nov. still contains several morphologically undescribed taxa at the ranks of genus and species, which have a worldwide distribution.

Inocybe gregaria, a new species of the Inosperma clade from tropical India

Phytotaxa ◽  
2016 ◽  
Vol 286 (2) ◽  
pp. 107 ◽  
Author(s):  
K. P. DEEPNA LATHA ◽  
PATINJAREVEETTIL MANIMOHAN
Keyword(s):  
New Species ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Large Subunit ◽  
Molecular Data ◽  
Internal Transcribed Spacer Region ◽  
Comprehensive Description ◽  
Morphological And Molecular Data ◽  
Kerala State ◽  
A New Species

Inocybe gregaria sp. nov. is described from Kerala State, India, based on morphological and molecular data. A comprehensive description, photographs, and comparisons with phenetically similar and phylogenetically related species are provided. The nuclear ribosomal internal transcribed spacer region (nrITS), a portion of the nuclear ribosomal large subunit (nrLSU) and a portion of the nuclear second-largest subunit of RNA polymerase II (rpb2) gene of this species were sequenced and analyzed. BLASTn searches using LSU and rpb2 sequences and subsequent ML phylogram of combined LSU and rpb2 sequences revealed that I. gregaria is conspecific with Inocybe sp. ZT8944, a collection assigned to the Inosperma clade that remains undescribed.

scholarly journals New Xerophilic Species of Penicillium from Soil

2021 ◽  
Vol 7 (2) ◽  
pp. 126
Author(s):  
Ernesto Rodríguez-Andrade ◽  
Alberto M. Stchigel ◽  
José F. Cano-Lira
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Internal Transcribed Spacer ◽  
Soil Samples ◽  
Beta Tubulin ◽  
Asexual Morph ◽  
Phenol Treatment ◽  
Thin Walled

Soil is one of the main reservoirs of fungi. The aim of this study was to study the richness of ascomycetes in a set of soil samples from Mexico and Spain. Fungi were isolated after 2% w/v phenol treatment of samples. In that way, several strains of the genus Penicillium were recovered. A phylogenetic analysis based on internal transcribed spacer (ITS), beta-tubulin (BenA), calmodulin (CaM), and RNA polymerase II subunit 2 gene (rpb2) sequences showed that four of these strains had not been described before. Penicillium melanosporum produces monoverticillate conidiophores and brownish conidia covered by an ornate brown sheath. Penicillium michoacanense and Penicillium siccitolerans produce sclerotia, and their asexual morph is similar to species in the section Aspergilloides (despite all of them pertaining to section Lanata-Divaricata). P. michoacanense differs from P. siccitolerans in having thick-walled peridial cells (thin-walled in P. siccitolerans). Penicillium sexuale differs from Penicillium cryptum in the section Crypta because it does not produce an asexual morph. Its ascostromata have a peridium composed of thick-walled polygonal cells, and its ascospores are broadly lenticular with two equatorial ridges widely separated by a furrow. All four new species are xerophilic. Despite the genus Penicillium containing more than 480 known species, they are rarely reported as xerophilic.

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