The Dogma of Dingoes—Taxonomic status of the dingo: A reply to Smith et al.

Zootaxa ◽  
2019 ◽  
Vol 4564 (1) ◽  
pp. 198 ◽  
Author(s):  
STEPHEN M. JACKSON ◽  
PETER J.S. FLEMING ◽  
MARK D.B. ELDRIDGE ◽  
SANDY INGLEBY ◽  
TIM FLANNERY ◽  
...  

Adopting the name Canis dingo for the Dingo to explicitly denote a species-level taxon separate from other canids was suggested by Crowther et al.  (2014) as a means to eliminate taxonomic instability and contention. However, Jackson et al.  (2017), using standard taxonomic and nomenclatural approaches and principles, called instead for continued use of the nomen C. familiaris for all domestic dogs and their derivatives, including the Dingo. (This name, C. familiaris, is applied to all dogs that derive from the domesticated version of the Gray Wolf, Canis lupus, based on nomenclatural convention.) The primary reasons for this call by Jackson et al.  (2017) were: (1) a lack of evidence to show that recognizing multiple species amongst the dog, including the Dingo and New Guinea Singing Dog, was necessary taxonomically, and (2) the principle of nomenclatural priority (the name familiaris Linnaeus, 1758, antedates dingo Meyer, 1793). Overwhelming current evidence from archaeology and genomics indicates that the Dingo is of recent origin in Australia and shares immediate ancestry with other domestic dogs as evidenced by patterns of genetic and morphological variation. Accordingly, for Smith et al.  (2019) to recognise Canis dingo as a distinct species, the onus was on them to overturn current interpretations of available archaeological, genomic, and morphological datasets and instead show that Dingoes have a deeply divergent evolutionary history that distinguishes them from other named forms of Canis (including C. lupus and its domesticated version, C. familiaris). A recent paper by Koepfli et al.  (2015) demonstrates exactly how this can be done in a compelling way within the genus Canis—by demonstrating deep evolutionary divergence between taxa, on the order of hundreds of thousands of years, using data from multiple genetic systems. Smith et al.  (2019) have not done this; instead they have misrepresented the content and conclusions of Jackson et al.  (2017), and contributed extraneous arguments that are not relevant to taxonomic decisions. Here we dissect Smith et al.  (2019), identifying misrepresentations, to show that ecological, behavioural and morphological evidence is insufficient to recognise Dingoes as a separate species from other domestic dogs. We reiterate: the correct binomial name for the taxon derived from Gray Wolves (C. lupus) by passive and active domestication, including Dingoes and other domestic dogs, is Canis familiaris. We are strongly sympathetic to arguments about the historical, ecological, cultural, or other significance of the Dingo, but these are issues that will have to be considered outside of the more narrow scope of taxonomy and nomenclature. 

1998 ◽  
Vol 46 (3) ◽  
pp. 203 ◽  
Author(s):  
S. J. B. Cooper ◽  
T. B. Reardon ◽  
J. Skilins

Genetic variation in two morphologically distinct species of Australian Rhinolophus, R. megaphyllus, and R. philippinensis, and a third putative species (‘the intermediate’) were examined using allozyme electrophoresis and sequencing of the mitochondrial DNA (mtDNA) control region with the aim of resolving their taxonomic status. The surprising result was that no fixed allozymic differences and low allozyme divergence existed among these three taxa over 45 loci examined. In contrast, levels of intra-generic divergence among eight species of Rhinolophus showed up to 50% fixed allozyme differences between species, indicating that low allozyme divergence was not a common feature of the genus and that the three Australian taxa are likely to be monophyletic and recently diverged. Phylogenetic analyses of mtDNA sequence data revealed that populations of R. megaphyllus and R. philippinensis from Sabah, New Guinea, and Australia were represented by distinct mtDNA clades and that the two species are polyphyletic. These data suggest a reclassification of the different geographic populations of R. megaphyllus and R. philippinensis as separate species on the basis of a phylogenetic species concept. Within Australia, three distinct mtDNA clades were found, one of which showed ‘the intermediate’ in paraphyly with R. philippinensis from Queensland, but does not resolve the taxonomic status of ‘the intermediate’. Two mtDNA clades were also found representing R. megaphyllus from Queensland and R. megaphyllus from Victoria and New South Wales respectively. The finding of genetic subdivision along the east coast of Australia in an apparently continuously distributed bat species raises questions of the origin and historical biogeography of these bats in Australia.


2014 ◽  
Vol 27 (6) ◽  
pp. 372 ◽  
Author(s):  
Daniel J. Ohlsen ◽  
Leon R. Perrie ◽  
Lara D. Shepherd ◽  
Michael J. Bayly

Asplenium listeri C.Chr. has been considered endemic to Christmas Island and is one of only two fern species listed as Critically Endangered under Australia’s Environment Protection and Biodiversity Conservation Act. Its status as a distinct species has been questioned because of morphological similarity to the widespread A. polyodon G.Forst., which also occurs on Christmas Island. Molecular analyses revealed that A. listeri and plants attributed to A. polyodon from coastal limestone in New Caledonia and Vanuatu share the same rbcL, trnL–trnF and rps4–trnS haplotype and that other samples of A. polyodon in Australia and the south-western Pacific belong to three separate molecular lineages. One of these lineages is formed by epiphytic A. polyodon from Christmas Island and has a chloroplast haplotype closely related to that of A. listeri, differing by four mutations. The A. listeri haplotype and each of the three A. polyodon lineages are associated with morphological characters and are all worthy of recognition as separate species. Asplenium listeri is here expanded to include limestone dwelling populations in the Pacific previously assigned to A. polyodon. This greatly extends the geographic range of A. listeri, and its conservation status should be revised accordingly. Application of correct names to all species in the A. polyodon complex requires further molecular sampling throughout its geographic range and clarification of how type material relates to each of the molecular groups.


PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e3522 ◽  
Author(s):  
Bridgett vonHoldt ◽  
Zhenxin Fan ◽  
Diego Ortega-Del Vecchyo ◽  
Robert K. Wayne

Background Admixture can facilitate adaptation. For example, black wolves have obtained the variant causing black coat color through past hybridization with domestic dogs and have higher fitness than gray colored wolves. Another recent example of the transfer of adaptive variation between the two species has been suggested by the similarity between high altitude Tibetan mastiffs and wolves at the EPAS1 gene, a transcription factor induced in low oxygen environments. Methods Here, we investigate the directionality of admixture in EPAS1 between 28 reference highland gray wolves, 15 reference domestic dogs, and 21 putatively admixed highland wolves. This experimental design represents an expanded sample of Asian dogs and wolves from previous studies. Admixture was inferred using 17,709 publicly available SNP genotypes on canine chromosome 10. We additionally conducted a scan for positive selection in the highland dog genome. Results We find an excess of highland gray wolf ancestry at the EPAS1 locus in highland domestic dogs, suggesting adaptive introgression from wolves to dogs. The signal of admixture is limited in genomic extent to a small region on chromosome 10, indicating that it is the focus of selection in an oxygen-limited environment. Discussion Our results suggest that an adaptive variant of EPAS1 in highland wolves was transferred to highland dogs, carrying linked variants that potentially function in hypoxia response at high elevation. The intertwined history of dogs and wolves ensures a unique evolutionary dynamic where variants that have appeared in the history of either species can be tested for their effects on fitness under natural and artificial selection. Such coupled evolutionary histories may be key to the persistence of wild canines and their domesticated kin given the increasing anthropogenic modifications that characterize the future of both species.


HortScience ◽  
1996 ◽  
Vol 31 (3) ◽  
pp. 324a-324
Author(s):  
Darlene O'Neill

The forma now known as Trillium ovatum L. forma hibbersonii Taylor & Szczawinski (Liliaceae) was first discovered on the west coast of Vancouver Island, B.C., in 1938 by Jack Arthur Hibberson (Holotype UBC 73131). The obvious morphological differences that characterize the forma hibbersonii from T. ovatum are the dwarfing of all its parts, pink not white flower color at anthesis, and narrow lanceolate leaves. Although it has gained popularity as a garden plant, it has received very little attention in the scientific community. A description and designation as a distinct species (T. hibbersonii) was published by L. Wiley in 1968 but was considered invalid. The 1975 valid publication by T.M.C. Taylor and A.F. Szczawinski designated this taxon at the intraspecific level of forma. The present study was initiated to provide a comprehensive reevaluation of the taxonomic status: forma, separate species, subspecies, or variety? A change in taxonomic status from forma to species would elevate the taxon from rare to endangered status. This study considers morphological differences and flavonoid analysis of samples from both natural populations and cultivated plants. Habitat, dormancy requirements, and breeding strategy also were considered. Initial investigation using random amplified polymorphic DNA (RAPD) indicates this method is another valuable tool for distinguishing between the taxa.


Phytotaxa ◽  
2015 ◽  
Vol 220 (3) ◽  
pp. 287 ◽  
Author(s):  
Rodrigo Schütz Rodrigues

Entada (Leguminosae) is a pantropical genus encompassing four Neotropical species, E. gigas (E. sect. Entada), E. polyphylla, E. polystachya and E. simplicata (E. sect. Entadopsis). However, the taxonomic status of E. polyphylla is still disputed, being treated as a separate species or a variety of E. polystachya. This article aims to take a comprehensive view of seedlings of Neotropical Entada, addressing the question of whether seedling morphology provide diagnostic characters that support the recognition of E. polyphylla at the species level. Seedlings of E. polyphylla were described and illustrated, whilst seedling data for the remaining Neotropical species were based on the literature. Entada polyphylla has an exclusive set of seedling characters within E. sect. Entadopsis, including cryptocotylar, hypogeal, reserve seedlings, long cotyledonary petioles, short cotyledon lobes, cataphylls and alternate, bipinnate eophylls. Therefore, seedling morphology supports the recognition of E. polyphylla as a distinct species and its reinstatement is here proposed. In addition, each of the four New World species of Entada can be diagnosed by their seedlings, and an identification key is also provided.


2018 ◽  
Vol 35 ◽  
pp. 1-10
Author(s):  
Oscar Diego Evangelista Vargas ◽  
Luis Fabio Silveira

Penelopeobscura Temminck, 1815 is a forest guan found in Brazil, Paraguay, Uruguay, Argentina and Bolivia. Three subspecies are currently recognized: Penelopeo.obscura Temminck, 1815, P.o.bridgesi Gray, 1860, and P.o.bronzina Hellmayr, 1914. The limits between Penelope taxa are poorly understood since few studies have evaluated their differences in plumage, distribution and taxonomy. Based on 104 specimens deposited in ornithological collections we studied the variations in the plumage of P.obscura, including all characters that have been used to describe the included subspecies. Our results show that the plumage of these birds is extremely variable in southern and southeastern Brazil. Without any morphological and morphometric characters to support P.o.bronzina as a valid taxon, we synonymized it with P.obscura. Conversely, P.o.bridgesi, which occurs in the Yungas and the Chaco, is a distinct taxon and should be treated as a separate species from P.obscura.


2019 ◽  
Vol 28 (2) ◽  
pp. 305-316
Author(s):  
M.A. Chursina ◽  
I.Ya. Grichanov

The recent catalogues of the family Dolichopodidae considered Syntormon pallipes (Fabricius, 1794) and S. pseudospicatus Strobl, 1899 as separate species. In this study, we used three approaches to estimate the significance of differences between the two species: molecular analysis (COI and 12S rRNA sequences), analysis of leg colour characters and geometric morphometric analysis of wing shape. The morphological data confirmed the absence of significant differences between S. pallipes and S. pseudospicatus found in the DNA analysis. Significant differences in the wing shape of two species have not been revealed. Hence, according to our data, there is no reason to consider S. pseudospicatus as a distinct species.


2011 ◽  
Vol 76 (5) ◽  
pp. 975-980 ◽  
Author(s):  
Bruce W. Christensen ◽  
Cheryl S. Asa ◽  
Chong Wang ◽  
Lindsey Vansandt ◽  
Karen Bauman ◽  
...  

Zootaxa ◽  
2021 ◽  
Vol 4948 (2) ◽  
pp. 201-220
Author(s):  
NEIL CUMBERLIDGE ◽  
PIERRE A. MVOGO NDONGO ◽  
PAUL F. CLARK

The taxonomic status of the widely distributed West and Central African freshwater crab Sudanonautes granulatus (Balss, 1929) sensu lato is revised in the light of improved morphological evidence which indicates that this taxon is a complex comprising at least 4 species: Sudanonautes granulatus (Balss, 1929) sensu stricto from Togo, S. koudougou n. sp. from Côte d’Ivoire, S. umaji n. sp. from Nigeria, and S. tiko from Cameroon, Nigeria, and Bioko. Diagnoses, illustrations and distribution maps are provided for these species and they are compared with congeners from West and Central Africa. 


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