scholarly journals Transcriptional profiling of mammary gland in Holstein cows with extremely different milk protein and fat percentage using RNA sequencing

BMC Genomics ◽  
2014 ◽  
Vol 15 (1) ◽  
pp. 226 ◽  
Author(s):  
Xiaogang Cui ◽  
Yali Hou ◽  
Shaohua Yang ◽  
Yan Xie ◽  
Shengli Zhang ◽  
...  
2011 ◽  
Vol 209 (1) ◽  
pp. 45-54 ◽  
Author(s):  
L L Hernandez ◽  
J L Collier ◽  
A J Vomachka ◽  
R J Collier ◽  
N D Horseman

Serotonin (5-HT) is a homeostatic regulator of lactation. Selective 5-HT reuptake inhibitors (SSRI) are commonly prescribed pharmaceuticals that inhibit activity of the 5-HT reuptake transporter, increasing cellular exposure to 5-HT. Use of SSRIs has been shown to alter lactation performance in humans and 5-HT has been shown to reduce milk yield in cattle. However, it has not been determined how SSRI treatments affect the bovine mammary gland. We evaluated the effects of SSRI (fluoxetine (FLX)) administration on tight junctions (TJs) and milk protein gene expression in a lactogenic culture model, using primary bovine mammary epithelial cells (pBMEC). Additionally, we evaluated the effects of intramammary infusions of FLX and 5-hydroxytryptophan on milk production and TJ status in multiparous Holstein cows at dry-off. Treatment of pBMEC cultured on permeable membranes disrupted TJs, as measured by transepithelial resistance and immunostaining for zona occludens 1. Correspondingly, treatment of ‘3D’, collagen-embedded lactogenic cultures of pBMEC with FLX suppressed milk protein gene expression (α-lactalbumin and β-casein) in a concentration-dependent manner. Finally, intramammary treatment of Holstein cows with FLX resulted in an accelerated rate of milk decline. Additionally, TJ permeability increased in FLX-treated animals, as measured by plasma lactose and milk Na+ and K+ levels. Results of these experiments imply that SSRI administration accelerates the rate of mammary gland involution through disassembly of TJs and inhibition of milk protein gene expression in vitro and in vivo, leading to reduction of milk yield.


2020 ◽  
Vol 11 ◽  
Author(s):  
Xiaogang Cui ◽  
Shengli Zhang ◽  
Qin Zhang ◽  
Xiangyu Guo ◽  
Changxin Wu ◽  
...  

A total of 31 differentially expressed genes in the mammary glands were identified in our previous study using RNA sequencing (RNA-Seq), for lactating cows with extremely high and low milk protein and fat percentages. To determine the regulation of milk composition traits, we herein investigated the expression profiles of microRNA (miRNA) using small RNA sequencing based on the same samples as in the previous RNA-Seq experiment. A total of 497 known miRNAs (miRBase, release 22.1) and 49 novel miRNAs among the reads were identified. Among these miRNAs, 71 were found differentially expressed between the high and low groups (p < 0.05, q < 0.05). Furthermore, 21 of the differentially expressed genes reported in our previous RNA-Seq study were predicted as target genes for some of the 71 miRNAs. Gene ontology and KEGG pathway analyses showed that these targets were enriched for functions such as metabolism of protein and fat, and development of mammary gland, which indicating the critical role of these miRNAs in regulating the formation of milk protein and fat. With dual luciferase report assay, we further validated the regulatory role of 7 differentially expressed miRNAs through interaction with the specific sequences in 3′UTR of the targets. In conclusion, the current study investigated the complexity of the mammary gland transcriptome in dairy cattle using small RNA-seq. Comprehensive analysis of differential miRNAs expression and the data from previous study RNA-seq provided the opportunity to identify the key candidate genes for milk composition traits.


PLoS ONE ◽  
2018 ◽  
Vol 13 (7) ◽  
pp. e0201628 ◽  
Author(s):  
Fan Jiangfeng ◽  
Luo Yuzhu ◽  
Yu Sijiu ◽  
Cui Yan ◽  
Xu Gengquan ◽  
...  

BMC Genomics ◽  
2018 ◽  
Vol 19 (1) ◽  
Author(s):  
V. Palombo ◽  
J. J. Loor ◽  
M. D’Andrea ◽  
M. Vailati-Riboni ◽  
K. Shahzad ◽  
...  

2021 ◽  
Vol 34 (1) ◽  
pp. 2-11 ◽  
Author(s):  
Jindřich Čítek ◽  
Michaela Brzáková ◽  
Lenka Hanusová ◽  
Oto Hanuš ◽  
Libor Večerek ◽  
...  

Objective: The aim of the study was to evaluate the influence of polymorphic loci and other factors on milk performance and the technological properties of milk.Methods: The analysis was performed on Simmental and Holstein cows in field conditions (n = 748). Milk yield in kg, fat and protein percentage and yield were evaluated. Technological properties were evaluated by milk fermentation ability, renneting, and an alcohol test. Polymorphisms in the acyl-CoA diacylgycerol transferase 1 (<i>DGAT1</i>), leptin (<i>LEP</i>), fatty acid synthase (<i>FASN</i>), stearoyl CoA desaturase 1 (<i>SCD1</i>), casein beta (<i>CSN2</i>), casein kappa (<i>CSN3</i>), and lactoglobulin beta genes were genotyped, and association analysis was performed.Results: The <i>DGAT1</i> AA genotype was associated with higher milk, protein and fat yields (p<0.05). The MM genotype in the <i>LEP</i> gene was associated with a lower protein percentage and the W allele with a higher protein percentage (p<0.05). In cows with the <i>FASN</i> GG genotype, the protein percentage was higher, but the A allele was associated with higher milk, protein and fat yields than the G allele. The TT genotype in <i>SCD1</i> was associated with the lowest milk, protein and fat yields and with the highest milk protein percentage (p<0.01). The T allele had higher values than the C allele (p<0.05) except for fat percentage. The genotype <i>CSN3</i> AA was associated with a significantly heightened milk yield; BB was associated with a high protein percentage. The effect of the alleles on the technological properties was not significant. The <i>CSN3</i> BB genotype was associated with the best alcohol test (p<0.01), and the renneting order was inverse. Milk from cows with the <i>CSN2</i> A<sup>1</sup>A<sup>1</sup> genotype was best in the milk fermentation ability. <i>CSN3</i> significantly affected the technological properties.Conclusion: The findings revealed the potential of some polymorphic loci for use in dairy cattle breeding and for the management of milk quality. In field research, the pivotal role of farms in milk yield, composition and technological properties was confirmed.


2020 ◽  
Vol 52 (11) ◽  
pp. 1191-1201
Author(s):  
Ling Chen ◽  
Rongfu Tian ◽  
Huilin Zhang ◽  
Xiaolin Liu

Abstract NFκB1/p105 is the critical member of the NFκB family which can suppress inflammation, ageing, and cancer when p50/p50 homodimer is formed. Currently, the research about the role of NFκB1/p105 during cow mastitis is limited. Here, we analyzed the correlation of six single-nucleotide variants of the NFκB1 gene with somatic cell count, milk yield, milk fat content, and milk protein content in 547 Chinese Holstein cows, and explored the mRNA expression profiles of the NFκB family and ubiquitin ligases (βTrCP1, βTrCP2, KPC1, KPC2) in LPS-induced bovine mammary epithelial cells (MECs) by transcriptome-Seq. The association analysis showed that cows with SNV2-TT and SNV6-CC in the NFκB1 gene had significantly higher milk protein content (P &lt; 0.05), while cows with SNV5-TT in the NFκB1 gene had significantly lower somatic cell score (SCS), but CC genotype at SNV5 locus was not detected in our Holstein cows. The transcriptome-Seq results demonstrated the mRNA expression of NFκB1 was increased and peaked at 4 h post-induction, while the mRNA expressions of both KPC1 and BCL3 that promote the anti-inflammation function of NFκB1/p105 were decreased in LPS-induced bovine MECs. TNFAIP3, an inhibitor of both degradation and processing of p105 precursor, was markedly increased by more than 3 folds. Furthermore, bta-miR-125b which targets at the 3ʹUTR of TNFAIP3 was reduced by 50%. These results indicated that SNV5-TT of the NFκB1 gene with lower SCS may be an anti-mastitis genotype that could cope with infection more efficiently in Chinese Holstein cows. In addition, the anti-inflammation role of NFκB1/p105 seemed to be inhibited in LPS-induced-bovine MECs because the formation of the p50/p50 homodimer was arrested. This study provides a new perspective to understand the inflammatory mechanism in dairy mastitis.


PLoS ONE ◽  
2012 ◽  
Vol 7 (1) ◽  
pp. e29685 ◽  
Author(s):  
Marc W. Schmid ◽  
Anja Schmidt ◽  
Ulrich C. Klostermeier ◽  
Matthias Barann ◽  
Philip Rosenstiel ◽  
...  

Gene ◽  
2021 ◽  
pp. 145864
Author(s):  
Meilin Hao ◽  
Juncai Jiang ◽  
Yongyun Zhang ◽  
Shaoqing Wang ◽  
Guowen Fu ◽  
...  

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