scholarly journals Non-canonical amino acid labeling in proteomics and biotechnology

2019 ◽  
Vol 13 (1) ◽  
Author(s):  
Aya M. Saleh ◽  
Kristen M. Wilding ◽  
Sarah Calve ◽  
Bradley C. Bundy ◽  
Tamara L. Kinzer-Ursem
1972 ◽  
Vol 54 (2) ◽  
pp. 279-294 ◽  
Author(s):  
David C. Shephard ◽  
Wendy B. Levin

The ability of chloroplasts isolated from Acetabulana mediterranea to synthesize the protein amino acids has been investigated. When this chloroplast isolate was presented with 14CO2 for periods of 6–8 hr, tracer was found in essentially all amino acid species of their hydrolyzed protein Phenylalanine labeling was not detected, probably due to technical problems, and hydroxyproline labeling was not tested for The incorporation of 14CO2 into the amino acids is driven by light and, as indicated by the amount of radioactivity lost during ninhydrin decarboxylation on the chromatograms, the amino acids appear to be uniformly labeled. The amino acid labeling pattern of the isolate is similar to that found in plastids labeled with 14CO2 in vivo. The chloroplast isolate did not utilize detectable amounts of externally supplied amino acids in light or, with added adenosine triphosphate (ATP), in darkness. It is concluded that these chloroplasts are a tight cytoplasmic compartment that is independent in supplying the amino acids used for its own protein synthesis. These results are discussed in terms of the role of contaminants in the observed synthesis, the "normalcy" of Acetabularia chloroplasts, the synthetic pathways for amino acids in plastids, and the implications of these observations for cell compartmentation and chloroplast autonomy.


ChemBioChem ◽  
2019 ◽  
Vol 20 (5) ◽  
pp. 659-666 ◽  
Author(s):  
Robert B. Quast ◽  
Fataneh Fatemi ◽  
Michel Kranendonk ◽  
Emmanuel Margeat ◽  
Gilles Truan

2015 ◽  
Vol 43 (16) ◽  
pp. 8111-8122 ◽  
Author(s):  
Takahito Mukai ◽  
Atsushi Yamaguchi ◽  
Kazumasa Ohtake ◽  
Mihoko Takahashi ◽  
Akiko Hayashi ◽  
...  

Synthesis ◽  
2019 ◽  
Vol 51 (05) ◽  
pp. 1273-1283 ◽  
Author(s):  
Simon Baldauf ◽  
Jeffrey Bode

The α-ketoacid–hydroxylamine (KAHA) ligation allows the coupling of unprotected peptide segments. The most widely used variant employs a 5-membered cyclic hydroxylamine that forms a homoserine ester as the primary ligation product. While very effective, monomers that give canonical amino acid residues are in high demand. In order to preserve the stability and reactivity of cyclic hydroxylamines, but form a canonical amino acid residue upon ligation, we sought to prepare cyclic derivatives of serine hydroxylamine. An evaluation of several cyclization strategies led to cyclobutanone ketals as the leading structures. The preparation, stability, and amide-forming ligation of these serine-derived ketals are described.


2012 ◽  
Vol 12 (1) ◽  
pp. 363-377 ◽  
Author(s):  
Yu Ye ◽  
Guangrong Yan ◽  
Yongwen Luo ◽  
Tiezhu Tong ◽  
Xiangtao Liu ◽  
...  

2011 ◽  
Vol 33 (9) ◽  
pp. 1885-1890 ◽  
Author(s):  
Makoto Sakuragi ◽  
Takashi Kitajima ◽  
Teruyuki Nagamune ◽  
Yoshihiro Ito

2020 ◽  
Vol 1 (8) ◽  
pp. 2888-2896
Author(s):  
Christoph Salzlechner ◽  
Anders Runge Walther ◽  
Sophie Schell ◽  
Nicholas Groth Merrild ◽  
Tabasom Haghighi ◽  
...  

Hydrogels are used widely for cell encapsulation to mimic the native ECM. Here, we characterise and visualise the matrix secreted by encapsulated cells by combining fluorescent non-canonical amino acid tagging with confocal Raman spectral imaging.


2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Talia D. Valentini ◽  
Sarah K. Lucas ◽  
Kelsey A. Binder ◽  
Lydia C. Cameron ◽  
Jason A. Motl ◽  
...  

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