scholarly journals Development of AhMITE1 markers through genome-wide analysis in peanut (Arachis hypogaea L.)

2018 ◽  
Vol 11 (1) ◽  
Author(s):  
M. Gayathri ◽  
Kenta Shirasawa ◽  
R. K. Varshney ◽  
M. K. Pandey ◽  
R. S. Bhat
2019 ◽  
Vol 20 (17) ◽  
pp. 4120 ◽  
Author(s):  
Kunkun Zhao ◽  
Ke Li ◽  
Longlong Ning ◽  
Jialin He ◽  
Xingli Ma ◽  
...  

Growth-regulating factors (GRFs) are plant-specific transcription factors that perform important functions in plant growth and development. Herein, we identified and characterised 24 AhGRF genes in peanut (Arachis hypogaea). AhGRF family genes were divided into six classes with OLQ and WRC domains. Transcriptome expression profile showed that more AhGRF genes, such as AhGRF5a gene, were at higher expression during pod development in Arachis monticola than cultivated species, especially at the pod rapid-expansion stage. AhGRF5a and AhGRF5b genes expressed at higher levels in pods than roots, leaves and stems tissues, existing in the difference between Arachis monticola and H8107. Exogenous GA3 application can activate AhGRF5a and AhGRF5b genes and H8107 line showed more positive response than Arachis monticola species. These results imply that these two AhGRF genes may be active during the peanut pod development.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Xiaohua Wang ◽  
Ping Xu ◽  
Yan Ren ◽  
Liang Yin ◽  
Shuangling Li ◽  
...  

2021 ◽  
Vol 1 (1) ◽  
pp. 48-54
Author(s):  
Guqiang Gao ◽  
Xingguo Zhang ◽  
Kunkun Zhao ◽  
Kai Zhao ◽  
Di Cao ◽  
...  

Genes ◽  
2020 ◽  
Vol 12 (1) ◽  
pp. 2
Author(s):  
Kunyan Zou ◽  
Ki-Seung Kim ◽  
Kipoong Kim ◽  
Dongwoo Kang ◽  
Yu-Hyeon Park ◽  
...  

Peanut (Arachis hypogaea L.) is one of the important oil crops of the world. In this study, we aimed to evaluate the genetic diversity of 384 peanut germplasms including 100 Korean germplasms and 284 core collections from the United States Department of Agriculture (USDA) using an Axiom_Arachis array with 58K single-nucleotide polymorphisms (SNPs). We evaluated the evolutionary relationships among 384 peanut germplasms using a genome-wide association study (GWAS) of seed aspect ratio data processed by ImageJ software. In total, 14,030 filtered polymorphic SNPs were identified from the peanut 58K SNP array. We identified five SNPs with significant associations to seed aspect ratio on chromosomes Aradu.A09, Aradu.A10, Araip.B08, and Araip.B09. AX-177640219 on chromosome Araip.B08 was the most significantly associated marker in GAPIT and Regularization method. Phosphoenolpyruvate carboxylase (PEPC) was found among the eleven genes within a linkage disequilibrium (LD) of the significant SNPs on Araip.B08 and could have a strong causal effect in determining seed aspect ratio. The results of the present study provide information and methods that are useful for further genetic and genomic studies as well as molecular breeding programs in peanuts.


2020 ◽  
Vol 20 (1) ◽  
Author(s):  
Xingli Ma ◽  
Xingguo Zhang ◽  
Sy Mamadou Traore ◽  
Zeyu Xin ◽  
Longlong Ning ◽  
...  

BMC Genomics ◽  
2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Xingguo Zhang ◽  
Xingli Ma ◽  
Longlong Ning ◽  
Zhongfeng Li ◽  
Kunkun Zhao ◽  
...  

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