scholarly journals Transcriptome profiling of the fertile parent and sterile hybrid in tea plant flower buds

Hereditas ◽  
2019 ◽  
Vol 156 (1) ◽  
Author(s):  
Linbo Chen ◽  
Hao Qu ◽  
Lifei Xia ◽  
Yue Liu ◽  
Huibing Jiang ◽  
...  
Gene ◽  
2021 ◽  
Vol 769 ◽  
pp. 145247
Author(s):  
Fen Wang ◽  
Zhi Chen ◽  
Huimin Pei ◽  
Zhiyou Guo ◽  
Di Wen ◽  
...  

2019 ◽  
Vol 20 (10) ◽  
pp. 2439 ◽  
Author(s):  
Yun-Long Shi ◽  
Yue-Yue Sheng ◽  
Zhuo-Yu Cai ◽  
Rui Yang ◽  
Qing-Sheng Li ◽  
...  

Anthracnose is a major leaf disease in tea plant induced by Colletotrichum, which has led to substantial losses in yield and quality of tea. The molecular mechanism with regards to responses or resistance to anthracnose in tea remains unclear. A de novo transcriptome assembly dataset was generated from healthy and anthracnose-infected leaves on tea cultivars “Longjing-43” (LJ43) and “Zhenong-139” (ZN139), with 381.52 million pair-end reads, encompassing 47.78 billion bases. The unigenes were annotated versus Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), National Center for Biotechnology Information (NCBI) non-redundant protein sequences (Nr), evolutionary genealogy of genes: Non-supervised Orthologous Groups (eggNOG) and Swiss-prot. The number of differential expression genes (DEGs) detected between healthy and infected leaves was 1621 in LJ43 and 3089 in ZN139. The GO and KEGG enrichment analysis revealed that the DEGs were highly enriched in catalytic activity, oxidation-reduction, cell-wall reinforcement, plant hormone signal transduction and plant-pathogen interaction. Further studies by quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) and high-performance liquid chromatography (HPLC) showed that expression of genes involved in endogenous salicylic acid biosynthesis and also accumulation of foliar salicylic acid are involved in the response of tea plant to anthracnose infection. This study firstly provided novel insight in salicylic acid acting as a key compound in the responses of tea plant to anthracnose disease. The transcriptome dataset in this study will facilitate to profile gene expression and metabolic networks associated with tea plant immunity against anthracnose.


2010 ◽  
Vol 37 (6) ◽  
pp. 646-653 ◽  
Author(s):  
Quan HAN ◽  
Ze-Jie LING ◽  
Pu-Ming HE ◽  
Chang-Yun XIONG

2012 ◽  
Vol 60 (5) ◽  
pp. 674-680 ◽  
Author(s):  
Hisashi Matsuda ◽  
Makoto Hamao ◽  
Seikou Nakamura ◽  
Haruka Kon’i ◽  
Megumi Murata ◽  
...  

2007 ◽  
Vol 55 (4) ◽  
pp. 598-605 ◽  
Author(s):  
Masayuki Yoshikawa ◽  
Seikou Nakamura ◽  
Yasuyo Kato ◽  
Koudai Matsuhira ◽  
Hisashi Matsuda

2017 ◽  
Vol 43 (2) ◽  
pp. 210
Author(s):  
Lin-Bo CHEN ◽  
Li-Fei XIA ◽  
Yi-Ping TIAN ◽  
Mei LI ◽  
Wei-Xi SONG ◽  
...  

Hereditas ◽  
2020 ◽  
Vol 157 (1) ◽  
Author(s):  
Yufei Liu ◽  
Dandan Pang ◽  
Yiping Tian ◽  
Youyong Li ◽  
Huibing Jiang ◽  
...  

Abstract Background The growth process of the tea plant (Camellia sinensis) includes vegetative growth and reproductive growth. The reproductive growth period is relatively long (approximately 1.5 years), during which a large number of nutrients are consumed, resulting in reduced tea yield and quality, accelerated aging, and shortened economic life of the tea plant. The formation of unisexual and sterile flowers can weaken the reproductive growth process of the tea plant. To further clarify the molecular mechanisms of pistil deletion in the tea plant, we investigated the transcriptome profiles in the pistil-deficient tea plant (CRQS), wild tea plant (WT), and cultivated tea plant (CT) by using RNA-Seq. Results A total of 3683 differentially expressed genes were observed between CRQS and WT flower buds, with 2064 upregulated and 1619 downregulated in the CRQS flower buds. These genes were mainly involved in the regulation of molecular function and biological processes. Ethylene synthesis–related ACC synthase genes were significantly upregulated and ACC oxidase genes were significantly downregulated. Further analysis revealed that one of the WIP transcription factors involved in ethylene synthesis was significantly upregulated. Moreover, AP1 and STK, genes related to flower development, were significantly upregulated and downregulated, respectively. Conclusions The transcriptome analysis indicated that the formation of flower buds with pistil deletion is a complex biological process. Our study identified ethylene synthesis, transcription factor WIP, and A and D-class genes, which warrant further investigation to understand the cause of pistil deletion in flower bud formation.


Sign in / Sign up

Export Citation Format

Share Document