Fast refractive index tomography of living cells in conventional microscope

2021 ◽  
Author(s):  
J. M. Soto ◽  
J. A. Rodrigo ◽  
T. Alieva
2010 ◽  
Vol 49 (33) ◽  
pp. 6416 ◽  
Author(s):  
Xiaodong Zhou ◽  
Kai Yu Liu ◽  
Nan Zhang ◽  
Christina Tan

2010 ◽  
Vol 26 (2) ◽  
pp. 674-681 ◽  
Author(s):  
Yuhki Yanase ◽  
Takaaki Hiragun ◽  
Sakae Kaneko ◽  
Hannah J. Gould ◽  
Malcolm W. Greaves ◽  
...  

2005 ◽  
Vol 13 (23) ◽  
pp. 9361 ◽  
Author(s):  
Benjamin Rappaz ◽  
Pierre Marquet ◽  
Etienne Cuche ◽  
Yves Emery ◽  
Christian Depeursinge ◽  
...  

1954 ◽  
Vol s3-95 (32) ◽  
pp. 399-423
Author(s):  
R. BARER ◽  
S. JOSEPH

The principles underlying a new method of refractometry of living cells are discussed. The method was evolved from the chance observation that the amoebocytes of the blood of the earthworm, examined in their own blood, appeared bright instead of dark by positive phase-contrast microscopy. This was shown to be due to the presence of dissolved haemoglobin which raised the refractive index of the medium above that of the cytoplasm. In order to determine the refractive index of the latter it was only necessary to dilute the blood until the cytoplasm became virtually invisible. Non-pigmented proteins and other high molecular weight substances have now been substituted for haemoglobin. The nature of the initial observations suggested that if the cell could be regarded to a first approximation as being composed entirely of proteins, the cytoplasmic protein concentration could be equated to the protein concentration of the immersion medium which made the cell appear with minimum contrast. This would only be true if equal concentrations of different proteins in solution had the same refractive index. The nature of refractive index and its relationship to density are discussed and it is shown that for nearly all unconjugated proteins so far investigated the specific refraction increments (i.e. the increase in refractive index per 1 per cent, increase in concentration) have almost the same values (.00185±2 per cent.). The effects of many factors such as pH, salts, temperature, wavelength, concentration, and nature of the solvent are discussed. Since living cells contain substances other than proteins the specific refraction increments of protein derivatives, lipides, carbohydrates, and salts are considered and it is shown that the presence of moderate amounts of such substances is unlikely to affect the refractive index of cells to any great extent. It is suggested that the mean specific refraction increment of protoplasm should be taken as .0018 and that this value can be used in order to calculate the solid and water content of protoplasm from values of refractive index.


1967 ◽  
Vol 34 (3) ◽  
pp. 859-883 ◽  
Author(s):  
Lionel I. Rebhun ◽  
Greta Sander

Isolated mitotic apparatuses (MA) of clam and sea urchin eggs were investigated by polarizing and electron microscopy. Examination of fixed MA in oils of different refractive index revealed that at least 90% of the retardation of isolated MA is due to positive, form birefringence, the remaining retardation deriving from positive, intrinsic birefringence. Electron micrographs reveal the isolated MA to be composed of microtubules, ribosome-like particles, and a variety of vesicles. In the clam MA the number of vesicles and ribosome-like particles relative to the number of microtubules is much lower than in the sea urchin MA. In clam MA this allows form and intrinsic birefringence to be related directly to microtubules. The relation of birefringence to microtubules in isolated sea urchin MA is more complex since ribosome-like particles adhere to microtubules, are oriented by them, and are likely to contribute to the form birefringence of the isolated MA. However, comparison of values of retardation for clam and sea urchin MA, indicates that the major part of the birefringence in sea urchin MA is also due to microtubules. The interpretation of the structures giving rise to birefringence in the MA of the living cells is likely to be even more complex since masking substances, compression, or tension on the living MA may alter the magnitude or sign of the birefringence.


2020 ◽  
Author(s):  
Junko Ogawa ◽  
Yoko Iwata ◽  
Nina U Tonnu ◽  
Chitra Gopinath ◽  
Ling Huang ◽  
...  

AbstractThe optical refractive index of cellular components is generally not a property considered amenable to manipulation in microscopy as this is an intrinsic physical property of materials. Here we show that by targeting cephalopod reflectin protein nanoparticles one can manipulate the optical refractive index of mammalian cellular compartments. We further demonstrate that refractive index alteration based contrast agents can be utilized for dark field microscopy and quantitative phase contrast holotomography. Additionally we have molecularly cloned novel reflectins with improved and novel optical properties.


1954 ◽  
Vol s3-95 (31) ◽  
pp. 271-304
Author(s):  
H. G. DAVIES ◽  
M. H. F. WILKINS ◽  
J. CHAYEN ◽  
L. F. LA COUR

1. The total mass M of substances other than water (the dry mass) in the living cell can be obtained from the expression M = φA/χ, where φ is the optical path difference (o.p.d.) due to the cell and A its projected area. The method makes use of the fact that the refractive increments α(χ = ioocα) of most substances in cells are approximately the same, and independent of concentration. Values for χ have been tabulated. Inaccuracies in the measurement of dry mass due to variations in χ (using λ average = 0.18) will be less than ± 10 per cent, in cells containing nucleic acids, proteins, and lipoproteins. When appreciable quantities of other substances are present the inaccuracy may be somewhat greater. When the total dry mass of living cells is determined in a medium other than water (e.g. isotonic solution), a correction term involving the thickness must be determined; this correction is often small. 3. The total dry masses and, in some cases, the concentrations of dry substance in a variety of biological objects including Amoebae, pollen grains at various stages of development, nuclei of cells in tissue culture, and sperm heads have been determined. In Tradescantia bracteata, during development from the microspore to the mature pollen grains, the dry mass increases by about tenfold. The dry masses of mature pollen grains were measured before and after successive digestion with ribonuclease, which removed about 4 to 14 per cent, of the dry mass, and with trypsin, after which about 40 per cent, of the original dry mass remained. In living ram sperm heads the ratio of deoxyribose nucleic acid to total dry mass determined by ultra-violet and interference microscopy respectively is 40 per cent. This is in good agreement with the value 45 per cent, obtained by bulk biochemical methods. 4. The interference microscope has been used to measure the refractive index of cells and, hence, the concentrations of dry substances in them, by immersing them in media of different known refractive indices. The application of this method to fixed cells is discussed theoretically. In experiments on fixed ram sperm heads the expected linear relationship between o.p.d. and refractive index of the immersion medium was obtained. Data on the average concentration of dry substance in ram sperm heads, the localized refractive index, and concentration in the denatured submicroscopic particles in the head, the percentage of the head volume occupied by them, and the geometrical thickness of the head were obtained. 5. Factors affecting the accuracy of the measurements of o.p.d., such as glare in the microscope, light scatter or absorption by the object, &c, are outlined.


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