Studies on the Mechanism of the Photosensitized Dimerization of Pyrimidines

1972 ◽  
Vol 27 (5) ◽  
pp. 550-553 ◽  
Author(s):  
A. Kornhauser ◽  
M. A. Pathak

Thymine-2-14C was irradiated with UV light (>300 nm) in water solutions in the presence of different sensitizers. Pyrimidines upon irradiation with wavelengths of 300—320 nm in the presence of some ketones as sensitizers, yield cyclobutyl pyrimidine dimers. The reaction occurs through a triplet-triplet energy transfer from the sensitizer to the substrate. The energy transfer, however, does not occur through a simple physical mechanism. The ability of a donor (e. g. ketone molecule) in its excited state to form a complex with the acceptor (pyrimidine molecule) appears to be a prerequisite in this type of photodimerization reaction. A correlation of the photochemical behavior of different ketones in this reaction with the nature of their excited states has been proposed. Carbonyl compounds possessing n, π* lowest triples are active in inducing pyrimidine dimerizations. By introducing some different electron donating groups to the ketone molecules that lower its π, π* state below its n, π* level, the sensitizing ability of the molecule appears to decrease or disappears completely. Ethylacetoacetate was found to be a more effective sensitizer than acetone or acetophenone. Likewise, dihydroxyacetone was found to be a potent photosensitizer in dimerization of thymine. Urocanic acid (UCA), a major UV absorbing compound in mammalian skin, did not show any sensitizing ability to induce cyclobutyl pyrimidine dimers on irradiation in the presence of thymine, with wavelengths greater than 300 nm.


2020 ◽  
Author(s):  
Mauricio Lineros-Rosa ◽  
Antonio Francés-Monerris ◽  
Antonio Monari ◽  
Miguel Angél Miranda ◽  
Virginie Lhiaubet-Vallet

Interaction of nucleic acids with light is a scientific question of paramount relevance not only in the understanding of life functioning and evolution, but also in the insurgence of diseases such as malignant skin cancer and in the development of biomarkers and novel light-assisted therapeutic tools. This work shows that the UVA portion of sunlight, not absorbed by canonical DNA nucleobases, can be absorbed by 5-formyluracil (ForU) and 5-formylcytosine (ForC), two ubiquitous oxidative lesions and epigenetic intermediates present in living beings in natural conditions. We measure the strong propensity of these molecules to populate triplet excited states able to transfer the excitation energy to thymine-thymine dyads, inducing the formation of the highly toxic and mutagenic cyclobutane pyrimidine dimers (CPDs). By using steady-state and transient absorption spectroscopy, NMR, HPLC, and theoretical calculations, we quantify the differences in the triplet-triplet energy transfer mediated by ForU and ForC, revealing that the former is much more efficient in delivering the excitation energy and producing the CPD photoproduct. Although significantly slower than ForU, ForC is also able to harm DNA nucleobases and therefore this process has to be taken into account as a viable photosensitization mechanism. The present findings evidence a rich photochemistry crucial to understand DNA photodamage and of potential use in the development of biomarkers and non-conventional photodynamic therapy agents.



2020 ◽  
Author(s):  
Katie Rykaczewski ◽  
Corinna Schindler

<div> <p>One of the most efficient ways to synthesize oxetanes is the light-enabled [2+2] cycloaddition reaction of carbonyls and alkenes, referred to as the Paternò-Büchi reaction. The reaction conditions for this transformation typically require the use of high energy UV light to excite the carbonyl, limiting the applications, safety, and scalability. We herein report the development of a visible light-mediated Paternò-Büchi reaction protocol that relies on triplet energy transfer from an iridium-based photocatalyst to the carbonyl substrates. This mode of activation is demonstrated for a variety of aryl glyoxylates and negates the need for both, visible light-absorbing carbonyl starting materials or UV light to enable access to a variety of functionalized oxetanes in up to 99% yield.</p> </div> <br>





2004 ◽  
Vol 108 (35) ◽  
pp. 7147-7150 ◽  
Author(s):  
Xichen Cai ◽  
Masanori Sakamoto ◽  
Michihiro Hara ◽  
Sachiko Tojo ◽  
Kiyohiko Kawai ◽  
...  


2020 ◽  
Author(s):  
Mauricio Lineros-Rosa ◽  
Antonio Francés-Monerris ◽  
Antonio Monari ◽  
Miguel Angél Miranda ◽  
Virginie Lhiaubet-Vallet

Interaction of nucleic acids with light is a scientific question of paramount relevance not only in the understanding of life functioning and evolution, but also in the insurgence of diseases such as malignant skin cancer and in the development of biomarkers and novel light-assisted therapeutic tools. This work shows that the UVA portion of sunlight, not absorbed by canonical DNA nucleobases, can be absorbed by 5-formyluracil (ForU) and 5-formylcytosine (ForC), two ubiquitous oxidative lesions and epigenetic intermediates present in living beings in natural conditions. We measure the strong propensity of these molecules to populate triplet excited states able to transfer the excitation energy to thymine-thymine dyads, inducing the formation of the highly toxic and mutagenic cyclobutane pyrimidine dimers (CPDs). By using steady-state and transient absorption spectroscopy, NMR, HPLC, and theoretical calculations, we quantify the differences in the triplet-triplet energy transfer mediated by ForU and ForC, revealing that the former is much more efficient in delivering the excitation energy and producing the CPD photoproduct. Although significantly slower than ForU, ForC is also able to harm DNA nucleobases and therefore this process has to be taken into account as a viable photosensitization mechanism. The present findings evidence a rich photochemistry crucial to understand DNA photodamage and of potential use in the development of biomarkers and non-conventional photodynamic therapy agents.



Author(s):  
Katie Rykaczewski ◽  
Corinna Schindler

<div> <p>One of the most efficient ways to synthesize oxetanes is the light-enabled [2+2] cycloaddition reaction of carbonyls and alkenes, referred to as the Paternò-Büchi reaction. The reaction conditions for this transformation typically require the use of high energy UV light to excite the carbonyl, limiting the applications, safety, and scalability. We herein report the development of a visible light-mediated Paternò-Büchi reaction protocol that relies on triplet energy transfer from an iridium-based photocatalyst to the carbonyl substrates. This mode of activation is demonstrated for a variety of aryl glyoxylates and negates the need for both, visible light-absorbing carbonyl starting materials or UV light to enable access to a variety of functionalized oxetanes in up to 99% yield.</p> </div> <br>





2016 ◽  
Vol 4 (14) ◽  
pp. 2843-2853 ◽  
Author(s):  
Xueyan Wu ◽  
Wenting Wu ◽  
Xiaoneng Cui ◽  
Jianzhang Zhao ◽  
Mingbo Wu

Bodipy–ferrocene dyads were prepared for reversible electrochemical switching of the singlet excited state (fluorescence), as well as the triplet excited states of Bodipy.



2020 ◽  
Author(s):  
Katie Rykaczewski ◽  
Corinna Schindler

<div> <p>One of the most efficient ways to synthesize oxetanes is the light-enabled [2+2] cycloaddition reaction of carbonyls and alkenes, referred to as the Paternò-Büchi reaction. The reaction conditions for this transformation typically require the use of high energy UV light to excite the carbonyl, limiting the applications, safety, and scalability. We herein report the development of a visible light-mediated Paternò-Büchi reaction protocol that relies on triplet energy transfer from an iridium-based photocatalyst to the carbonyl substrates. This mode of activation is demonstrated for a variety of aryl glyoxylates and negates the need for both, visible light-absorbing carbonyl starting materials or UV light to enable access to a variety of functionalized oxetanes in up to 99% yield.</p> </div> <br>



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