scholarly journals Genetic analysis of reciprocal differences in the inheritance of in vitro characters in pearl millet

2016 ◽  
Vol 39 (1) ◽  
pp. 54-61 ◽  
Author(s):  
Valluri V Satyavathi ◽  
V. Manga ◽  
Muktinutalapati V. Subba Rao ◽  
Malladi Chittibabu
2015 ◽  
Vol 14 (46) ◽  
pp. 3112-3123 ◽  
Author(s):  
Ti eacute coura Kouakou ◽  
Bakari Kouassi Abou ◽  
Oulo N rsquo nan Alla ◽  
Gonedel eacute Bi S eacute ry ◽  
Dinant Monique ◽  
...  

Author(s):  
M.R. Reshma Krishnan ◽  
M.S. Patel ◽  
R.A. Gami ◽  
H.S. Bhadauria ◽  
Y.N. Patel

Author(s):  
Jie-Yuan Jin ◽  
Pan-Feng Wu ◽  
Fang-Mei Luo ◽  
Bing-Bing Guo ◽  
Lei Zeng ◽  
...  

Background: Preaxial polydactyly (PPD) is one of the most common developmental malformations, with a prevalence of 0.8–1.4% in Asians. PPD is divided into four types, PPD I–IV, and PPD I is the most frequent type. Only six loci (GLI1, GLI3, STKLD1, ZRS, pre-ZRS, and a deletion located 240 kb from SHH) have been identified in non-syndromic PPD cases. However, pathogenesis of most PPD patients has never been investigated. This study aimed to understand the genetic mechanisms involved in the etiology of PPD I in a family with multiple affected members.Methods: We recruited a PPD I family (PPD001) and used stepwise genetic analysis to determine the genetic etiology. In addition, for functional validation of the identified GLIS1 variant, in vitro studies were conducted. GLIS1 variants were further screened in additional 155 PPD cases.Results: We identified a GLIS1 variant (NM_147193: c.1061G > A, p.R354H) in the PPD001 family. In vitro studies showed that this variant decreased the nuclear translocation of GLIS1 and resulted in increased cell viability and migration. RNA sequencing revealed abnormal TBX4 and SFRP2 expression in 293T cells transfected with mutant GLIS1. Additionally, we identified a GLIS1 variant (c.664G > A, p.D222N) in another PPD case.Conclusion: We identified two GLIS1 variants in PPD I patients and first linked GLIS1 with PPD I. Our findings contributed to future molecular and clinical diagnosis of PPD and deepened our knowledge of this disease.


2019 ◽  
Vol 3 (Supplement_1) ◽  
Author(s):  
Bryan Gannon ◽  
Raymond Glahn ◽  
Saurabh Mehta

Abstract Objectives A multiple biofortified food crop trial targeting iron, zinc, and vitamin A deficiencies among young children and their breastfeeding mothers is planned in India. We sought to determine iron bioavailability from biofortified and conventional crop mixes representative of planned meal components. Methods A 24-meal menu was developed based on pearl millet, sweet potato, and lentils targeted for a feeding trial. Crops were procured from India, cooked, and freeze-dried before two rounds of an established in vitro digestion/Caco-2 iron bioavailability assay. Samples used a fixed weight adjusted for sweet potato water content. Representative crop proportions were determined using k-means clustering, combined such that samples included either all biofortified or all control crop varieties, and analyzed in triplicate. Outcomes were Caco-2 iron uptake and uptake normalized to iron per sample for fractional bioavailability. Data were analyzed with generalized linear models in SAS accounting for crop proportions and variety. Results Across both experiments, biofortified pearl millet alone demonstrated higher iron uptake than conventional varieties (5.01 ± 1.66 vs. 2.17 ± 0.96 ng ferritin/mg protein, P ≤ 0.036). Addition of sweet potato to pearl millet did not change iron uptake for biofortified varieties (P ≥0.13), but increased control iron uptake for all amounts of sweet potato (P ≤ 0.006), which did not differ from biofortified varieties (P ≥ 0.08). Lentil proportion increased iron uptake (β = 4.6 ± 2.2, P = 0.009), with no effect of variety or a lentil by variety interaction (P ≥ 0.56). The overall effect estimate of biofortified vs. control was (β = 1.79 ± 0.91, P = 0.08). Iron uptake normalized to iron per sample was higher for control crops (P ≤ 0.02), and enhanced by sweet potato, while inhibited by pearl millet (both P < 0.001). Conclusions A Caco-2 assay predicts that biofortified pearl millet alone has greater iron bioavailability than control pearl millet. The addition of sweet potato and lentils increased overall and relative iron bioavailability, while reducing differences between biofortified and control varieties. Matrix effects, processing, and promoters/inhibitors of iron absorption should be considered in addition to total iron concentration when optimizing iron bioavailability. Funding Sources This work was supported by HarvestPlus and the USDA. Supporting Tables, Images and/or Graphs


2020 ◽  
Vol 148 ◽  
pp. 149-161
Author(s):  
Rafael Guimarães Vizoná ◽  
Bruno da Costa Perez ◽  
Maria Gabriela Campolina Diniz Peixoto ◽  
Joao Henrique Moreira Viana ◽  
Ricardo Vieira Ventura ◽  
...  

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