scholarly journals Record of the rare Caribbean mud eel, Pythonichthys sanguineus (Heterenchelyidae, Anguilliformes), in the region of the Amazon Reef

2019 ◽  
Vol 49 (2) ◽  
pp. 131-138
Author(s):  
Matheus Marcos ROTUNDO ◽  
Leonardo MACHADO ◽  
Claudio OLIVEIRA ◽  
Wagner César Rosa dos SANTOS ◽  
Alexandre Pires MARCENIUK
Keyword(s):  
Puerto Rico ◽  
Dna Barcoding ◽  
Lateral Line ◽  
Brazilian Coast ◽  
Pectoral Fin ◽  
Southern Limit ◽  
Fishery Resource ◽  
Caribbean Fauna

ABSTRACT As they spend most of their time buried in the substrate and are not a fishery resource, heterenchelyids are seldom seen. These eels are characterized by their greatly reduced eyes, which are covered by semi-transparent skin, the absence of a pectoral fin or lateral line, and no pores on the head or body. Pythonichthys sanguineus is a particularly poorly-known species, with only eight scientific records from Cuba, Puerto Rico, Colombia, Venezuela, Guyana, and Suriname. The present study is based on six adult specimens of P. sanguineus captured by vessels of the shrimp trawling fleet along the northern Brazilian coast, in the vicinity of the Amazon Reef. We provide meristic, morphometric and DNA barcoding data. These findings provide insights into the distribution of the species off the northern Brazilian coast and contribute to the discussion about the southern limit of the Greater Caribbean fauna.

scholarly journals Resurrection of the genus Homalopteroides (Teleostei: Balitoridae) with a redescription of H. modestus (Vinciguerra 1890)

Zootaxa ◽  
2012 ◽  
Vol 3586 (1) ◽  
pp. 329 ◽  
Author(s):  
ZACHARY S. RANDALL ◽  
LAWRENCE M. PAGE
Keyword(s):  
Lateral Line ◽  
Head Length ◽  
Pectoral Fin ◽  
Caudal Fin ◽  
Dorsal Fin ◽  
Interorbital Width ◽  
Fin Rays ◽  
Orbital Rim ◽  
Pectoral Fin Rays ◽  
Pelvic Fin

The genus Homalopteroides Fowler 1905 is resurrected and distinguished from the genus Homaloptera van Hasselt 1823based on a combination of characters including a unique mouth morphology, dorsal-fin origin over pelvic fin,≤60 lateral-line scales, and≤30 predorsal scales. Species included in Homalopteroides are H. wassinkii (Bleeker 1853), H. modestus(Vinciguerra 1890), H. rupicola (Prashad & Mukerji 1929), H. smithi (Hora 1932), H. stephensoni (Hora 1932), H. weberi(Hora 1932), H. tweediei (Herre 1940), H. indochinensis (Silas 1953), H. nebulosus (Alfred 1969), H. yuwonoi (Kottelat1998), and possibly H. manipurensis (Arunkumar 1999). Homalopteroides modestus (Vinciguerra 1890) is a poorlyknown species that was originally described from the Meekalan and Meetan rivers of southern Myanmar. It occurs in theSalween, Mae Khlong, and Tenasserim basins, and can be distinguished from all other species of Homalopteroides by thecombination of caudal-fin pattern (black proximal and distal bars, median blotch), 15 pectoral-fin rays, pectoral-fin lengthgreater than head length, 5½–6½ scales above and 5–6 scales below the lateral line (to the pelvic fin), 39–44 total lateral-line pores, no axillary pelvic-fin lobe, pelvic fin not reaching anus, orbital length less than interorbital width in adult, and maxillary barbel reaching to or slightly past the anterior orbital rim.

A new species of Jupiaba Zanata, 1997 (Ostariophysi, Characiformes, Characidae) from the rio Tocantins drainage, Brazil

Zootaxa ◽  
2007 ◽  
Vol 1614 (1) ◽  
pp. 53-60 ◽  
Author(s):  
THIAGO N.A. PEREIRA ◽  
PAULO H.F. LUCINDA
Keyword(s):  
New Species ◽  
Lateral Line ◽  
Pectoral Fin ◽  
Fin Rays ◽  
A New Species ◽  
Pectoral Fin Rays

A new characid species, Jupiaba elassonaktis, is described from the rio Tocantins drainage. The new species is distinguished from its congeners by the following combination of characters: medial cusps of premaxillary teeth much larger than remaining cusps, dentary teeth decreasing abruptly in size from the fifth tooth backwards, first dorsaland anal-fin rays not prolonged by an elongate filament, presence of a vertically elongate humeral spot, 33–39 scales on lateral line, 5–7 scales series above lateral line, 9–11 pectoral-fin rays, and a incomplete series of median predorsal scales.

scholarly journals The Utility of DNA Barcoding for the Species Identification of Larval Fish in the Lower Ing River, Thailand

2020 ◽  
Vol 20 (9) ◽  
pp. 671-679
Author(s):  
Dutrudi Panprommin ◽  
Kanyanat Soontornprasit ◽  
Siriluck Tuncharoen ◽  
Niti Iamchuen
Keyword(s):  
Dna Barcoding ◽  
Species Identification ◽  
Larval Fish ◽  
Average Length ◽  
Conservation Status ◽  
Morphological Characters ◽  
Nucleotide Sequences ◽  
Coi Gene ◽  
Fishery Resource ◽  
Sustainable Fishery

The species identification of larval fish is very important for sustainable fishery resource management. However, identification based on morphological characters is very difficult, complex and error-prone. DNA barcoding with the sequence of cytochrome c oxidase I (COI) gene was used to identify larval fish species from 10 stations in the tributaries of the lower Ing River. One hundred and six samples were collected between May 2016 and April 2017. The average length of the COI nucleotide sequences was approximately 640 bp. A total of 99 nucleotide sequences were identified in 35 species, 31 genera, 19 families and 9 orders, with 97-100% identity with entries in both the GenBank and BOLD databases. The genetic distance within species ranged from 0.000 to 0.004. However, seven samples were identified at only the genus level because their sequences had not been reported in any databases. Based on IUCN conservation status, most species were classified as least concern (77.14%). Approximately 69.23% of all species were related to human uses in fisheries, aquaculture or aquariums, whereas 30.77% of species were not assessed. Trichopsis vittata (family Osphronemidae) (90%) had the most frequency of occurrence, followed by Oryzias minutillus (family Adrianichthyidae) (70%) and Trichopodus trichopterus (family Osphronemidae) (70%).

scholarly journals DNA Barcoding of the Solanaceae Family in Puerto Rico Including Endangered and Endemic Species

2019 ◽  
Vol 144 (5) ◽  
pp. 363-374 ◽  
Author(s):  
Lumariz Hernandez Rosario ◽  
Juan O. Rodríguez Padilla ◽  
Desiree Ramos Martínez ◽  
Alejandra Morales Grajales ◽  
Joel A. Mercado Reyes ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Puerto Rico ◽  
Dna Barcoding ◽  
Endemic Species ◽  
Phylogenetic Trees ◽  
Dna Barcode ◽  
Pairwise Distance ◽  
Greater Antilles ◽  
Solanaceae Species ◽  
Solanaceae Family

The Solanaceae family is one of the largest and well-distributed plant families in the world. It contains species of agricultural and economical importance, such as Solanum tuberosum, Solanum melongena, Solanum lycopersicum, Nicotiana tabacum, and Capsicum annuum. In Puerto Rico, there are ≈46 species of Solanaceae of which six are endemic: Brunfelsia densifolia, Brunfelsia lactea, Brunfelsia portoricensis, Goetzea elegans, Solanum ensifolium, and Solanum woodburyi. Our objective was to use DNA barcoding to identify the Solanaceae species in Puerto Rico, including the endemics, and to assess the species relationships between them. To accomplish our objective, two chloroplast regions (psbA-trnH and matK) and a nuclear region [internal transcribed spacer (ITS)] were assessed. Pairwise distance and phylogenetic analysis demonstrate that DNA barcoding can be used to discriminate at the species level among these taxa in Puerto Rico. For all three markers, the genus that showed the highest pairwise distance between represented species was Solanum, whereas the genus that displayed the least was Capsicum. Phylogenetic trees of single and concatenated regions were generated from sequences obtained in this study and from data downloaded from the National Center for Biotechnology Information database. Our results show that this technique can be used to identify species with one, two, or three combinations of DNA barcode markers depending on the taxon. In addition, this is the first study to include the endemic species S. woodburyi in a molecular phylogenetic analysis, and it was found to have a close relationship with S. ensifolium, also endemic to Puerto Rico, and to Solanum bahamense from the Bahamas and Greater Antilles. Therefore, we suggest that S. woodburyi might be part of the Bahamense clade.

Nandus mercatus (Teleostei: Perciformes: Nandidae), a new leaf fish from Sumatra

Zootaxa ◽  
2008 ◽  
Vol 1963 (1) ◽  
pp. 43-53 ◽  
Author(s):  
HEOK HEE NG
Keyword(s):  
Lateral Line ◽  
Pectoral Fin ◽  
Body Depth ◽  
River Drainage ◽  
Fin Rays ◽  
Musi River ◽  
Pectoral Fin Rays

Nandus mercatus sp. nov. is described from the Musi River drainage in Sumatra. It differs from all congeners in having a combination of the following characters: body depth 43.0–43.2% SL, 15 pectoral-fin rays, 29–32 lateral line scales, 11–12 scale rows below the lateral line, and slightly concave predorsal profile. The characters that diagnose the genus are also reviewed and identified. Nandus is here diagnosed as having the following combination of characters: ectopterygoid toothed, posterodorsal corner of the subopercular not produced into a slender process and the second preural centrum with a distally bifurcate hemal spine.

Redescription of Brachirus aspilos (Bleeker 1852), a senior synonym of four nominal species, with a note on the distribution of Dagetichthys marginatus (Boulenger 1900) (Pleuronectiformes: Soleidae)

Zootaxa ◽  
2021 ◽  
Vol 4908 (3) ◽  
pp. 354-368
Author(s):  
JO OKAMOTO ◽  
HIROYUKI MOTOMURA
Keyword(s):  
Lateral Line ◽  
Valid Species ◽  
Nominal Species ◽  
Blind Side ◽  
Pectoral Fin ◽  
Type Specimens ◽  
Body Depth ◽  
Ocular Side ◽  
Fin Rays ◽  
Pelvic Fin

The poorly known sole Brachirus aspilos (Bleeker 1852) is redescribed on the basis of the holotype and 48 non-type specimens from Japan, Taiwan, Philippine, Singapore, Indonesia, Papua New Guinea, and Australia. The species is characterized by the following combination of characters: dorsal-fin rays 64–76 (mode 71), anal-fin rays 51–62 (56), pored scales on straight portion of lateral line 93–126 (118); vertebrae 41–44 (43); pectoral-fin rays 4–7 (6) and 4–7 (5) on ocular and blind sides, respectively; pelvic-fin rays 4–6 (5) and 4–5 (4) on ocular and blind sides, respectively; caudal-fin rays 13–15 (14); body slightly elongate, its depth 40.0–51.0 (mean 45.5)% SL; head length 16.1–23.9 (18.6)% SL; pectoral fin on ocular side longer than that on blind side, 5.3–7.6 (6.6)% SL and 4.0–6.0 (4.8)% SL, respectively; pelvic fin on ocular side longer than that on blind side, 4.9–7.4 (6.0)% SL and 4.3–7.5 (5.8)% SL, respectively; body depth below lateral line 21.7–27.1 (23.4)% SL; lips without labial papillae; eyes separated by scaled interorbital space; cycloid or weakly ctenoid scales on blind side; body on ocular side uniformly brown or grey with dark vermiculation, some small white blotches along dorsal- and anal-fin bases, or without remarkable pattern. Brachirus dicholepis (Peters 1877), B. heterolepis (Bleeker 1856), B. marmoratus (Bleeker 1853), and B. sorsogonensis (Evermann & Seale 1907), previously regarded as valid species, are all regarded as junior synonyms of B. aspilos. In addition, specimens previously reported as Dagetichthys marginatus (Boulenger 1900) from the western Pacific Ocean are re-identified as B. aspilos, the former species being considered restricted to South African waters. 

Distribution and reproductive seasonality of snailfishes and lumpfishes in the St. Lawrence River estuary and the Gulf of St. Lawrence

1985 ◽  
Vol 63 (7) ◽  
pp. 1622-1628 ◽  
Author(s):  
Kenneth W. Able ◽  
Wendy Irion
Keyword(s):  
River Estuary ◽  
Size At Maturity ◽  
Reproductive Seasonality ◽  
Pectoral Fin ◽  
Meristic Characters ◽  
Southern Limit ◽  
Pyloric Caeca ◽  
First Time ◽  
Shape And Size ◽  
St Lawrence River

The distribution of two lumpfishes and nine snailfishes was determined from a variety of samples from the St. Lawrence River estuary and Gulf of St. Lawrence. Two of these (Paraliparis calidus and P. copei) are recorded for the first time. Two others (Liparis gibbus and L. fabricii) reach their southern limit in the study area, while two others (L. coheni and L. inquilinus) may not occur further north. The Careproctus species found appear to be C. reinhardti (abundant) and C. ranula (rare). These species can be distinguished by selected meristic characters, especially pyloric caeca, pectoral fin shape, and size at maturity. All species examined spawn in the spring and summer except L. coheni, which probably spawns during the winter.

A new species of the greeneye genus Chlorophthalmus (Teleostei: Chlorophthalmidae) from the central North Pacific

Zootaxa ◽  
2019 ◽  
Vol 4555 (3) ◽  
pp. 396
Author(s):  
KYOJI FUJIWARA ◽  
HIDETOSHI WADA ◽  
HIROYUKI MOTOMURA
Keyword(s):  
New Species ◽  
Lateral Line ◽  
North Pacific ◽  
Pectoral Fin ◽  
Dorsal Fin ◽  
Lower Jaw ◽  
Fin Ray ◽  
Seamount Chain ◽  
Fin Length ◽  
Central North Pacific

Chlorophthalmus imperator sp. nov. (Teleostei: Chlorophthalmidae) is described on the basis of nine specimens (98.1–174.8 mm SL) from the Emperor Seamount Chain in the central North Pacific. The new species is characterized by the following combination of characters: 49–51 lateral-line scales; 6 scale rows above lateral line; 3 + 19–22 = 22–25 (modally 22) gill rakers; outermost tooth patches of lower jaw with 6–14 large thorn-shaped teeth, the tips projecting in advance of lower-jaw profile; lower-jaw symphysis with two distinct moderately-sized projections; tongue without teeth; pelvic-fin origin vertically below 4th or 5th (usually 5th) dorsal-fin ray base; head length 26.7–28.9 (mean 27.7) % SL; snout length 6.9–7.7 (7.3) % SL; horizontal orbit diameter 11.9–12.9 (12.3) % SL; upper-jaw length 11.7–13.2 (12.6) % SL; maxillary depth 3.1–3.8 (3.4) % SL; pre-dorsal-fin length 34.2–36.6 (35.3) % SL; pre-pectoral-fin length 27.3–29.8 (27.9) % SL; anus to anal-fin origin length 27.3–29.9 (28.5) % SL; pectoral-fin length 21.0–24.9 (22.7) % SL. 

scholarly journals Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast

PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4702 ◽  
Author(s):  
Fábio B. Britto ◽  
Anders J. Schmidt ◽  
Adriana M.F. Carvalho ◽  
Carolina C.M.P. Vasconcelos ◽  
Antonia M. Farias ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Gene Flow ◽  
Population Connectivity ◽  
Brazilian Coast ◽  
Fishery Resource ◽  
Ucides Cordatus ◽  
Migration Rates ◽  
Mangrove Crab ◽  
Key Species

Background The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Methods Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Results Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was significant differentiation among localities, despite of the low value of FST (= 0.019; P < 0.001). FST and Jost’s D indexes were also estimated in pairwise comparisons and showed significant differences between most of the surveyed site pairs (P < 0.05). Structure evidenced a single genetic group among samples, however SAShA pointed to a non-panmictic condition (P = 0.011). AMOVA detected four statistical significant clusters with low level of differentiation (FCT = 0.037; P = 0.023). The gene flow model that best described the population connectivity was the island model, with ∼24 crabs being exchanged among localities per generation. Discussion The high migration rates found among localities seem to be the main force acting to sustain the distribution of the genetic diversity of U. cordatus. Despite the high gene flow and the weak population structure among samples, the significant genetic differences found suggest that gene flow alone does not bypass the effects of genetic drift, natural selection and/or human exploitation. These findings are vital for the establishment of a database to be used in the development of conservation programs.

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