scholarly journals Protein quantification protocol optimized for zebrafish brain tissue (Bradford method) v1 (protocols.io.bjnfkmbn)

protocols.io ◽  
2020 ◽  
Author(s):  
Adrieli Sachett ◽  
Matheus Gallas ◽  
Greicy M ◽  
Radharani not provided ◽  
Ana Herrmann ◽  
...  
2013 ◽  
Vol 33 (2) ◽  
pp. 261-264 ◽  
Author(s):  
Eliana Farias ◽  
Katia L. Yasunaga ◽  
Romulo V.R. Peixoto ◽  
Micaella P. Fonseca ◽  
Wagner Fontes ◽  
...  

The aim of this study was to compare two methods of tear sampling for protein quantification. Tear samples were collected from 29 healthy dogs (58 eyes) using Schirmer tear test (STT) strip and microcapillary tubes. The samples were frozen at -80ºC and analyzed by the Bradford method. Results were analyzed by Student's t test. The average protein concentration and standard deviation from tears collected with microcapillary tube were 4.45mg/mL ±0.35 and 4,52mg/mL ±0.29 for right and left eyes respectively. The average protein concentration and standard deviation from tears collected with Schirmer Tear Test (STT) strip were and 54.5mg/mL ±0.63 and 54.15mg/mL ±0.65 to right and left eyes respectively. Statistically significant differences (p<0.001) were found between the methods. In the conditions in which this study was conducted, the average protein concentration obtained with the Bradford test from tear samples obtained by Schirmer Tear Test (STT) strip showed values higher than those obtained with microcapillary tube. It is important that concentration of tear protein pattern values should be analyzed according the method used to collect tear samples.


Author(s):  
Itia Favre-Bulle ◽  
Timo A. Nieminen ◽  
Daryl Preece ◽  
Lucy A. Heap ◽  
Ethan K. Scott ◽  
...  

protocols.io ◽  
2020 ◽  
Author(s):  
Adrieli Sachett ◽  
Matheus Gallas ◽  
Greicy M ◽  
Radharani not provided ◽  
Ana Herrmann ◽  
...  

2018 ◽  
Vol 67 (1) ◽  
pp. 87-92
Author(s):  
Hristo Kalaydzhiev ◽  
Petya Ivanova ◽  
Galina Uzunova ◽  
Ivan Manolov ◽  
Vesela Chalova

Summary Being attractive for insects, non-genetically modified rapeseed is valuable for maintaining environmental biodiversity. Primarily, the rapeseed is an important industrial crop which is used for production of vegetable oil. Oil extraction from rapeseeds results in the generation of substantial amounts of rapeseed meal which is used either as a protein rich feed additive or as a source for preparation of protein containing ingredients for food industry. Both applications require frequent evaluation of protein content. Although Kjeldahl method is considered standard, it is not appropriate for routine evaluation of protein content in protein extracts. The aim of the study was to evaluate suitability of biuret and Bradford methods for protein quantification in rapeseed meal extracts. After consecutive triple extraction of proteins with water, 5% NaCl, 70% ethyl alcohol and 0.1 N NaOH, protein evaluation of each albumin, globulin, prolamin and glutelin extraction aliquot demonstrated overall lower protein content by Bradford method compared to biuret method. The most pronounced differences in protein content were observed with prolamin fraction where three fold higher protein concentrations in each extraction aliquot was observed when biuret method was applied for the evaluation. Comparative quantification of the total protein of each of the four fractions followed a similar trend of lower protein content evaluation by Bradford method. Overall results indicated biuret method as more suitable for protein quantification in rapeseed meal extracts which was confirmed by comparison with data obtained by Kjeldahl method.


protocols.io ◽  
2020 ◽  
Author(s):  
Adrieli Sachett ◽  
Matheus Gallas ◽  
Greicy M ◽  
Radharani not provided ◽  
Ana Herrmann ◽  
...  

2021 ◽  
pp. 147498
Author(s):  
Luana Moro ◽  
Giovana Rech ◽  
Amanda Martins Linazzi ◽  
Thainá Garbino dos Santos ◽  
Diogo Lösch de Oliveira

2020 ◽  
Author(s):  
Steffen Kösters ◽  
Mandy Rettel ◽  
Britta Eggers ◽  
Peter Riederer ◽  
Manfred Gerlach ◽  
...  

Abstract Background: Processing of post-mortem human brain tissue samples like Neuromelanin-containing substantia nigra is a challenging task in proteomics research in the context of neurodegenerative diseases such as Parkinson’s disease, due to the availability of only limited sample amounts. Therefore, a highly efficient lysis and digestion approach is needed to guarantee high reproducibility and a good quantification performance. We conducted a systematic study in order to compare qualitatively and quantitatively six different sample preparation protocols for substantia nigra brain tissue collected by laser microdissection.Results: LC-MS/MS analysis revealed that the combination of formic acid and in-solution digestion with trypsin leads to an enhanced peptide and protein identification as well as a robust and reliable protein quantification with a very good reproducibility.Conclusion: We recommend this protocol for future studies of human substantia nigra tissue as well as NM granules in the context of neurodegenerative disorders like Parkinson syndrome.


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