SDS-PAGE AND TWO-DIMENSIONAL ELECTROPHORESIS DETERMINATION OF PROTEIN FROM PEEL AND PULP TISSUES OF RIPENING DURIAN FRUIT

2008 ◽  
pp. 215-224 ◽  
Author(s):  
A. Suwanagul ◽  
R. Deewathanawong
2010 ◽  
Vol 2 (1) ◽  
pp. 9-13
Author(s):  
Dalius Matuzevičius

The paper presents an algorithm for automated selection of the highest quality two-dimensional gel electrophoresis image. The quality criterion is the amount of vertical geometric distortions of the gel. The aim is to select the least distorted gel from the group received during the same biochemical experiment. Vertical geometric distortions displace proteins of the same molecular mass from the horizontal line and have a greater impact on the determination of protein characteristics than horizontal distortions. After presenting algorithm for evaluation of distortions and selection of base gel results are compared to expert's made selections. If necessary, algorithm may be adapted for horizontal distortion evaluation.


1977 ◽  
Author(s):  
H. Horák ◽  
P.G. Barton ◽  
C.M. Gibbs

Horse platelet membranes isolated by the glycerol lysis technique and subjected to SDS-PAGE showed large amounts of actin and variable amounts of myosin relative to other membrane proteins and glycoproteins. [14C]-2-dinitrothioadenosine diphosphate, when briefly incubated with whole cells, rapidly labeled the membrane actin component. Retention of myosin by the membranes during their isolation was optimized by lysing the cells and resuspending the membranes in Tris-HC1, pH 7.35, with 0.13 M KCl, 0.01 M NaCl, 2 mM MgCl2 and 0.01 mM CaCl2. Subsequently, significant amounts of actin and myosin could be eluted from the membranes with 10-3 M ADP but not with CDP, GDP or UDP. Actin was also eluted effectively from membranes prepared in Tris-NaCl, pH 7.35, by washing with 0.1 mM EDTA (in presence or absence of ADP). Despite repeated washings with either elution system, more than 50% of the actin remained associated with the membranes. When membrane vesicles with right side out (RO) and inside out (IO) orientation, separated by chromatography on Con A-Sepharose, were similarly washed identical results were obtained. Two dimensional electrophoresis of the membrane protein of IO vesicles separated two major actin components, one of which was differentially removed by prior treatment of the vesicles with 10-3 M ADP. It is concluded that (1) platelet myosin and two forms of platelet actin are associated with the cell membrane and that myosin and one form of actin can be displaced by ADP or EDTA while the second form of actin is more firmly attached, and (2) some actin is present on both membrane surfaces.


2017 ◽  
Vol 18 (1) ◽  
pp. 211-220
Author(s):  
Marilza Assunção de OLIVEIRA ◽  
Roseane Pinto Martins de OLIVEIRA ◽  
Ana Rita de LIMA ◽  
Edmar Vaz de ANDRADE ◽  
Jan Sidarta Lima de ABREU ◽  
...  

SUMMARY This study aimed to identify proteins in the seminal plasma associated with fertility in sheep of Santa Inês in Manaus, AM, using twodimensional electrophoresis techniques associated with mass spectrometry. Semen samples from eight adult sheep were collected by removing an aliquot for the physical and morphological assessments of semen and seminal plasma was subjected to SDS-PAGE profile and two-dimensional electrophoresis. Gels were stained with colloidal Coomassie, scanned and analyzed using ImageMaster 2D Platinum software, version 6.0. The selected individual spots were cut from the master gel, digested with trypsin and subjected to identification by mass spectrometry (MALDITof / Tof). Of the 108 spots detected in the gel, it selected 10 differential spots (based on the distribution thereof in the bidimensional gel and pre-analysis of the 2D ImageMaster Platinum Software) identifying 03 proteins: clusterin, a protein 14-3-3 zeta chain and Ram Seminal versicles 22kDa Protein. The identity of these proteins implies that the components of seminal plasma participate in physiological processes involved in sperm protection, motility and sperm capacitation, all associated with fertility. These proteins need to be better studied to see whether the same could be used as molecular markers of fertility as they were also found in other studies conducted with sheep Santa Ines.


2010 ◽  
Vol 391 (12) ◽  
Author(s):  
Bernardetta Maresca ◽  
Luisa Cigliano ◽  
Maria M. Corsaro ◽  
Giuseppina Pieretti ◽  
Massimo Natale ◽  
...  

AbstractHaptoglobin is an acute phase glycoprotein, secreted by hepatocytes and other types of cells including keratinocytes. Haptoglobin has been suggested to impair the immune response, inhibit gelatinases in the extracellular matrix and promote angiogenesis, but its role in psoriasis is obscure to date. Changes in haptoglobin glycan structure were observed in several diseases. The aim of this study was to investigate whether haptoglobin displays glycan variations in psoriasis. We found that the pattern of plasma haptoglobin glycoforms, following two-dimensional electrophoresis, exhibited significant quantitative differences in spot intensities between patients and controls. Quantitative and qualitative differences in glycan mass, between patients and controls, were found by mass spectrometry of glycopeptides from tryptic digests of protein isolated from both patients and controls. The number of distinct fucosylated glycoforms of peptides NLFLNHSENATAK and MVSHHNLTTGATLINEQWLLTTAK was higher in patients than in controls, but no fucosylated glycan was detected on peptide VVLHPNYSQ-VDIGLIK in either case. The number of peptides with distinct triantennary and tetraantennary glycans was higher in patients than in controls. Abundance or structure of specific glycans, which are present in haptoglobin from patients and are different or missing in normal haptoglobin, might be associated with disease activity.


Development ◽  
1988 ◽  
Vol 103 (4) ◽  
pp. 665-674
Author(s):  
R.H. Racusen ◽  
F.M. Schiavone

Single embryos, representing each of four distinct morphological stages, were selected from cultures of the domesticated carrot for analysis of total [35S]methionine-labelled proteins. Following exposure to radiolabel for 12 to 18h, embryos were individually disrupted in a 3mm diameter, precisely-matched, plastic mortar and pestle. Radiolabelled proteins extracted by this procedure were separated by two-dimensional electrophoresis procedures, consisting of isoelectric focusing in 1mm tubes, followed by SDS-PAGE in a small slab gel. Comparisons of autoradiographs of these gels revealed that the levels of a number of proteins were modulated during the conversion of disordered callus cells into maturing embryos. In addition, miniature surgical techniques were used to separate the apex (cotyledon end) from the base (root end) of late-stage embryos, for extraction of proteins and analysis of spatial differences in protein distribution. About five proteins in extracts from each section were observed to be synthesized at different rates in the two halves, indicating that there are molecular correlates for early polarized growth. About half of the proteins, whose appearances were unique to apical and basal sections of embryos, were also observed to fluctuate in comparisons of autoradiographs of two-dimensional protein separations from embryos at different developmental stages.


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