An investigation of linguistic problems in automatic multi-document summaries / Uma investigação de problemas linguísticos em sumários automáticos multidocumento

Abstract: Automatic summaries commonly present diverse linguistic problems that affect textual quality and thus their understanding by users. Few studies have tried to characterize such problems and their relation with the performance of the summarization systems. In this paper, we investigated the problems in multi-document extracts (i.e., summaries produced by concatenating several sentences taken exactly as they appear in the source texts) generated by systems for Brazilian Portuguese that have different approaches (i.e., superficial and deep) and performances (i.e., baseline and state-of-the art methods). For that, we first reviewed the main characterization studies, resulting in a typology of linguistic problems more suitable for multi-document summarization. Then, we manually annotated a corpus of automatic multi-document extracts in Portuguese based on the typology, which showed that some of linguistic problems are significantly more recurrent than others. Thus, this corpus annotation may support research on linguistic problems detection and correction for summary improvement, allowing the production of automatic summaries that are not only informative (i.e., they convey the content of the source material), but also linguistically well structured.Keywords: automatic summarization; multi-document summary; linguistic problem; corpus annotation.Resumo: Sumários automáticos geralmente apresentam vários problemas linguísticos que afetam a sua qualidade textual e, consequentemente, sua compreensão pelos usuários. Alguns trabalhos caracterizam tais problemas e os relacionam ao desempenho dos sistemas de sumarização. Neste artigo, investigaram-se os problemas em extratos (isto é, sumários produzidos pela concatenação de sentenças extraídas na íntegra dos textos-fonte) multidocumento em Português do Brasil gerados por sistemas que apresentam diferentes abordagens (isto é, superficial e profunda) e desempenho (isto é, métodos baseline e do estado-da-arte). Para tanto, as principais caracterizações dos problemas linguísticos em sumários automáticos foram investigadas, resultando em uma tipologia mais adequada à sumarização multidocumento. Em seguida, anotou-se manualmente um corpus de extratos com base na tipologia, evidenciando que alguns tipos de problemas são significativamente mais recorrentes que outros. Assim, essa anotação gera subsídios para as tarefas automáticas de detecção e correção de problemas linguísticos com vistas à produção de sumários automáticos não só mais informativos (isto é, que cobrem o conteúdo do material de origem), como também linguisticamente bem-estruturados.Palavras-chave: sumarização automática; sumário multidocumento; problema linguístico; anotação de corpus.

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Multi-hop assortativities for network classification

Journal of Complex Networks ◽

10.1093/comnet/cny034 ◽

2018 ◽

Vol 7 (4) ◽

pp. 603-622 ◽

Cited By ~ 1

Author(s):

Leonardo Gutiérrez-Gómez ◽

Jean-Charles Delvenne

Keyword(s):

Machine Learning ◽

Scientific Collaboration ◽

State Of The Art ◽

Medical Engineering ◽

Research Field ◽

Classification Task ◽

Collaboration Network ◽

Structural Patterns ◽

Art Methods

Abstract Several social, medical, engineering and biological challenges rely on discovering the functionality of networks from their structure and node metadata, when it is available. For example, in chemoinformatics one might want to detect whether a molecule is toxic based on structure and atomic types, or discover the research field of a scientific collaboration network. Existing techniques rely on counting or measuring structural patterns that are known to show large variations from network to network, such as the number of triangles, or the assortativity of node metadata. We introduce the concept of multi-hop assortativity, that captures the similarity of the nodes situated at the extremities of a randomly selected path of a given length. We show that multi-hop assortativity unifies various existing concepts and offers a versatile family of ‘fingerprints’ to characterize networks. These fingerprints allow in turn to recover the functionalities of a network, with the help of the machine learning toolbox. Our method is evaluated empirically on established social and chemoinformatic network benchmarks. Results reveal that our assortativity based features are competitive providing highly accurate results often outperforming state of the art methods for the network classification task.

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Automatic Detection of Discrimination Actions from Social Images

Electronics ◽

10.3390/electronics10030325 ◽

2021 ◽

Vol 10 (3) ◽

pp. 325

Author(s):

Zhihao Wu ◽

Baopeng Zhang ◽

Tianchen Zhou ◽

Yan Li ◽

Jianping Fan

Keyword(s):

Action Recognition ◽

State Of The Art ◽

Automatic Detection ◽

Experimental Results ◽

Practical Approach ◽

Detection And Identification ◽

Art Methods ◽

Image Set ◽

Social Images ◽

Relationship Identification

In this paper, we developed a practical approach for automatic detection of discrimination actions from social images. Firstly, an image set is established, in which various discrimination actions and relations are manually labeled. To the best of our knowledge, this is the first work to create a dataset for discrimination action recognition and relationship identification. Secondly, a practical approach is developed to achieve automatic detection and identification of discrimination actions and relationships from social images. Thirdly, the task of relationship identification is seamlessly integrated with the task of discrimination action recognition into one single network called the Co-operative Visual Translation Embedding++ network (CVTransE++). We also compared our proposed method with numerous state-of-the-art methods, and our experimental results demonstrated that our proposed methods can significantly outperform state-of-the-art approaches.

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A Deep Learning Approach to Predict Autism Spectrum Disorder Using Multisite Resting-State fMRI

Applied Sciences ◽

10.3390/app11083636 ◽

2021 ◽

Vol 11 (8) ◽

pp. 3636

Author(s):

Faria Zarin Subah ◽

Kaushik Deb ◽

Pranab Kumar Dhar ◽

Takeshi Koshiba

Keyword(s):

Autism Spectrum Disorder ◽

Resting State ◽

State Of The Art ◽

Resting State Fmri ◽

Autism Spectrum ◽

Spectrum Disorder ◽

Bootstrap Analysis ◽

Proposed Model ◽

Art Methods ◽

The Mean

Autism spectrum disorder (ASD) is a complex and degenerative neuro-developmental disorder. Most of the existing methods utilize functional magnetic resonance imaging (fMRI) to detect ASD with a very limited dataset which provides high accuracy but results in poor generalization. To overcome this limitation and to enhance the performance of the automated autism diagnosis model, in this paper, we propose an ASD detection model using functional connectivity features of resting-state fMRI data. Our proposed model utilizes two commonly used brain atlases, Craddock 200 (CC200) and Automated Anatomical Labelling (AAL), and two rarely used atlases Bootstrap Analysis of Stable Clusters (BASC) and Power. A deep neural network (DNN) classifier is used to perform the classification task. Simulation results indicate that the proposed model outperforms state-of-the-art methods in terms of accuracy. The mean accuracy of the proposed model was 88%, whereas the mean accuracy of the state-of-the-art methods ranged from 67% to 85%. The sensitivity, F1-score, and area under receiver operating characteristic curve (AUC) score of the proposed model were 90%, 87%, and 96%, respectively. Comparative analysis on various scoring strategies show the superiority of BASC atlas over other aforementioned atlases in classifying ASD and control.

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A contour property based approach to segment nuclei in cervical cytology images

BMC Medical Imaging ◽

10.1186/s12880-020-00533-9 ◽

2021 ◽

Vol 21 (1) ◽

Author(s):

Iram Tazim Hoque ◽

Nabil Ibtehaz ◽

Saumitra Chakravarty ◽

M. Saifur Rahman ◽

M. Sohel Rahman

Keyword(s):

Pap Smear ◽

State Of The Art ◽

Cervical Cytology ◽

Average Intensity ◽

Nucleus Size ◽

Real Dataset ◽

Art Methods ◽

Convolution Filter ◽

Cervical Cells ◽

Nucleus Segmentation

Abstract Background Segmentation of nuclei in cervical cytology pap smear images is a crucial stage in automated cervical cancer screening. The task itself is challenging due to the presence of cervical cells with spurious edges, overlapping cells, neutrophils, and artifacts. Methods After the initial preprocessing steps of adaptive thresholding, in our approach, the image passes through a convolution filter to filter out some noise. Then, contours from the resultant image are filtered by their distinctive contour properties followed by a nucleus size recovery procedure based on contour average intensity value. Results We evaluate our method on a public (benchmark) dataset collected from ISBI and also a private real dataset. The results show that our algorithm outperforms other state-of-the-art methods in nucleus segmentation on the ISBI dataset with a precision of 0.978 and recall of 0.933. A promising precision of 0.770 and a formidable recall of 0.886 on the private real dataset indicate that our algorithm can effectively detect and segment nuclei on real cervical cytology images. Tuning various parameters, the precision could be increased to as high as 0.949 with an acceptable decrease of recall to 0.759. Our method also managed an Aggregated Jaccard Index of 0.681 outperforming other state-of-the-art methods on the real dataset. Conclusion We have proposed a contour property-based approach for segmentation of nuclei. Our algorithm has several tunable parameters and is flexible enough to adapt to real practical scenarios and requirements.

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CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes

Bioinformatics ◽

10.1093/bioinformatics/btaa1047 ◽

2020 ◽

Author(s):

Matteo Chiara ◽

Federico Zambelli ◽

Marco Antonio Tangaro ◽

Pietro Mandreoli ◽

David S Horner ◽

...

Keyword(s):

Functional Annotation ◽

Ad Hoc ◽

State Of The Art ◽

Supplementary Information ◽

Genomic Sequences ◽

Supplementary Data ◽

Evolutionary Patterns ◽

Genomic Variants ◽

Art Methods ◽

Available Resources

Abstract Summary While over 200 000 genomic sequences are currently available through dedicated repositories, ad hoc methods for the functional annotation of SARS-CoV-2 genomes do not harness all currently available resources for the annotation of functionally relevant genomic sites. Here, we present CorGAT, a novel tool for the functional annotation of SARS-CoV-2 genomic variants. By comparisons with other state of the art methods we demonstrate that, by providing a more comprehensive and rich annotation, our method can facilitate the identification of evolutionary patterns in the genome of SARS-CoV-2. Availabilityand implementation Galaxy http://corgat.cloud.ba.infn.it/galaxy; software: https://github.com/matteo14c/CorGAT/tree/Revision_V1; docker: https://hub.docker.com/r/laniakeacloud/galaxy_corgat. Supplementary information Supplementary data are available at Bioinformatics online.

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State of the art methods for combined water and energy systems optimisation in Kraft pulp mills

Optimization and Engineering ◽

10.1007/s11081-021-09612-4 ◽

2021 ◽

Author(s):

Elvis Ahmetović ◽

Zdravko Kravanja ◽

Nidret Ibrić ◽

Ignacio E. Grossmann ◽

Luciana E. Savulescu

Keyword(s):

Kraft Pulp ◽

State Of The Art ◽

Energy Systems ◽

Pulp Mills ◽

Art Methods ◽

Kraft Pulp Mills

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Supervised learning for the detection of negation and of its scope in French and Brazilian Portuguese biomedical corpora

Natural Language Engineering ◽

10.1017/s1351324920000352 ◽

2020 ◽

pp. 1-21 ◽

Cited By ~ 2

Author(s):

Clément Dalloux ◽

Vincent Claveau ◽

Natalia Grabar ◽

Lucas Emanuel Silva Oliveira ◽

Claudia Maria Cabral Moro ◽

...

Keyword(s):

Machine Learning ◽

Information Extraction ◽

State Of The Art ◽

Automatic Detection ◽

Brazilian Portuguese ◽

Supervised Machine Learning ◽

Biomedical Domain ◽

Learning Approaches ◽

Cross Domain ◽

Automatic Methods

Abstract Automatic detection of negated content is often a prerequisite in information extraction systems in various domains. In the biomedical domain especially, this task is important because negation plays an important role. In this work, two main contributions are proposed. First, we work with languages which have been poorly addressed up to now: Brazilian Portuguese and French. Thus, we developed new corpora for these two languages which have been manually annotated for marking up the negation cues and their scope. Second, we propose automatic methods based on supervised machine learning approaches for the automatic detection of negation marks and of their scopes. The methods show to be robust in both languages (Brazilian Portuguese and French) and in cross-domain (general and biomedical languages) contexts. The approach is also validated on English data from the state of the art: it yields very good results and outperforms other existing approaches. Besides, the application is accessible and usable online. We assume that, through these issues (new annotated corpora, application accessible online, and cross-domain robustness), the reproducibility of the results and the robustness of the NLP applications will be augmented.

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