scholarly journals Cluster Analysis of Visual Differences on Pairs of SARS-CoV-2 Genomes

2021 ◽  
Author(s):  
Minghan Zhu ◽  
Jeffrey Zheng

Abstract This paper represents sample results for the C2 and C3 modules of the MAS. Genomic index maps were generated for SARS-CoV-2 genomes from different samples worldwide, and eleven other viral genomes were selected for comparisons. Each 2D genomic index map acts as a pair of X-Y coordinate scatter points located in a specific geometric region restricted. Supported by the principle of entropy invariance and visual distributions, it is convenient to identify the variations of SARS-CoV-2 genomes in the global scope. In view of this powerful transformation structure, future exploration of the detailed systematic expansion of theory and medical applications for COVID-19 patients is required.

2020 ◽  
Author(s):  
Minghan Zhu ◽  
Jeffrey Zheng

Abstract This paper represents sample results for the C2 and C3 modules of the MAS. Genomic index maps were generated for SARS-CoV-2 genomes from different samples worldwide, and eleven other viral genomes were selected for comparisons. Each 2D genomic index map acts as a pair of X-Y coordinate scatter points located in a specific geometric region restricted. Supported by the principle of entropy invariance and visual distributions, it is convenient to identify the variations of SARS-CoV-2 genomes in the global scope. In view of this powerful transformation structure, future exploration of the detailed systematic expansion of theory and medical applications for COVID-19 patients is required.


Author(s):  
Xiang Liu ◽  
Wangdo Kim ◽  
Burkhard Drerup

The anatomical landmarks on the body surface are important to shape and motion analysis. This paper presents a method for extracting anatomical landmarks on the foot from scattered 3D surface points collected by FastSCAN (Polhemus, Colchester, Vermont, USA). By least squares surface fitting, the surface is reconstructed from the scattered points and the Gaussian curvature and mean curvature are calculated. The landmarks formed by underlying muscles and skeletal structures distinguish themselves clearly on the Koenderink shape index maps. The loci of landmarks avail possible statistical shape analysis and medical applications such as tibial torsion measurement.


2020 ◽  
Author(s):  
Minghan Zhu ◽  
Jeffrey Zheng

Abstract This paper is the B2 module of the MAS. The quantification matrix is formed according to the four-base arrangement in the genome sequence. The differences in new coronavirus genome sequencing sequences in different samples were demonstrated by using the most concise methods. Using 4 primitive variable value measures, changes in the virus genome sequence base order conditions were determined. When two relatively large genomic sequences are slightly different, the integrated distribution of the difference calculation is subtly similar to the Bose-Einstein distribution, while the sum calculation shows a powerful distribution complexity. It can be formed under the macroscopic angle and can distinguish 16 combinations of supersymmetric structures. In view of the abundant transformation structure in this kind of transformation system, the detailed exploration remains to be followed by the systematic expansion of theory and medical application.


2021 ◽  
Author(s):  
Minghan Zhu ◽  
Jeffrey Zheng

Abstract This paper is the B2 module of the MAS. The quantification matrix is formed according to the four-base arrangement in the genome sequence. The differences in new coronavirus genome sequencing sequences in different samples were demonstrated by using the most concise methods. Using 4 primitive variable value measures, changes in the virus genome sequence base order conditions were deter-mined. When two relatively large genomic sequences are slightly different, the integrated distribution of the difference calculation is subtly similar to the Bose-einstein distribution, while the sum calculation shows a powerful distribution complexity. It can be formed under the macroscopic angle and can distinguish 16 combinations of supersymmetric structures. In view of the abundant transformation structure in this kind of transformation system, the detailed exploration remains to be followed by the systematic expansion of theory and medical application.


Author(s):  
Thomas W. Shattuck ◽  
James R. Anderson ◽  
Neil W. Tindale ◽  
Peter R. Buseck

Individual particle analysis involves the study of tens of thousands of particles using automated scanning electron microscopy and elemental analysis by energy-dispersive, x-ray emission spectroscopy (EDS). EDS produces large data sets that must be analyzed using multi-variate statistical techniques. A complete study uses cluster analysis, discriminant analysis, and factor or principal components analysis (PCA). The three techniques are used in the study of particles sampled during the FeLine cruise to the mid-Pacific ocean in the summer of 1990. The mid-Pacific aerosol provides information on long range particle transport, iron deposition, sea salt ageing, and halogen chemistry.Aerosol particle data sets suffer from a number of difficulties for pattern recognition using cluster analysis. There is a great disparity in the number of observations per cluster and the range of the variables in each cluster. The variables are not normally distributed, they are subject to considerable experimental error, and many values are zero, because of finite detection limits. Many of the clusters show considerable overlap, because of natural variability, agglomeration, and chemical reactivity.


Author(s):  
Matthew L. Hall ◽  
Stephanie De Anda

Purpose The purposes of this study were (a) to introduce “language access profiles” as a viable alternative construct to “communication mode” for describing experience with language input during early childhood for deaf and hard-of-hearing (DHH) children; (b) to describe the development of a new tool for measuring DHH children's language access profiles during infancy and toddlerhood; and (c) to evaluate the novelty, reliability, and validity of this tool. Method We adapted an existing retrospective parent report measure of early language experience (the Language Exposure Assessment Tool) to make it suitable for use with DHH populations. We administered the adapted instrument (DHH Language Exposure Assessment Tool [D-LEAT]) to the caregivers of 105 DHH children aged 12 years and younger. To measure convergent validity, we also administered another novel instrument: the Language Access Profile Tool. To measure test–retest reliability, half of the participants were interviewed again after 1 month. We identified groups of children with similar language access profiles by using hierarchical cluster analysis. Results The D-LEAT revealed DHH children's diverse experiences with access to language during infancy and toddlerhood. Cluster analysis groupings were markedly different from those derived from more traditional grouping rules (e.g., communication modes). Test–retest reliability was good, especially for the same-interviewer condition. Content, convergent, and face validity were strong. Conclusions To optimize DHH children's developmental potential, stakeholders who work at the individual and population levels would benefit from replacing communication mode with language access profiles. The D-LEAT is the first tool that aims to measure this novel construct. Despite limitations that future work aims to address, the present results demonstrate that the D-LEAT represents progress over the status quo.


2001 ◽  
Vol 60 (2) ◽  
pp. 89-98 ◽  
Author(s):  
Alain Clémence ◽  
Thierry Devos ◽  
Willem Doise

Social representations of human rights violations were investigated in a questionnaire study conducted in five countries (Costa Rica, France, Italy, Romania, and Switzerland) (N = 1239 young people). We were able to show that respondents organize their understanding of human rights violations in similar ways across nations. At the same time, systematic variations characterized opinions about human rights violations, and the structure of these variations was similar across national contexts. Differences in definitions of human rights violations were identified by a cluster analysis. A broader definition was related to critical attitudes toward governmental and institutional abuses of power, whereas a more restricted definition was rooted in a fatalistic conception of social reality, approval of social regulations, and greater tolerance for institutional infringements of privacy. An atypical definition was anchored either in a strong rejection of social regulations or in a strong condemnation of immoral individual actions linked with a high tolerance for governmental interference. These findings support the idea that contrasting definitions of human rights coexist and that these definitions are underpinned by a set of beliefs regarding the relationships between individuals and institutions.


2016 ◽  
Vol 37 (4) ◽  
pp. 250-259 ◽  
Author(s):  
Cara A. Palmer ◽  
Meagan A. Ramsey ◽  
Jennifer N. Morey ◽  
Amy L. Gentzler

Abstract. Research suggests that sharing positive events with others is beneficial for well-being, yet little is known about how positive events are shared with others and who is most likely to share their positive events. The current study expanded on previous research by investigating how positive events are shared and individual differences in how people share these events. Participants (N = 251) reported on their likelihood to share positive events in three ways: capitalizing (sharing with close others), bragging (sharing with someone who may become jealous or upset), and mass-sharing (sharing with many people at once using communication technology) across a range of positive scenarios. Using cluster analysis, five meaningful profiles of sharing patterns emerged. These profiles were associated with gender, Big Five personality traits, narcissism, and empathy. Individuals who tended to brag when they shared their positive events were more likely to be men, reported less agreeableness, less conscientiousness, and less empathy, whereas those who tended to brag and mass-share reported the highest levels of narcissism. These results have important theoretical and practical implications for the growing body of research on sharing positive events.


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