scholarly journals Malaria Parasite Detection in Thick Blood Smear Microscopic Images Using Modified YOLOV3 and YOLOV4 Models

2020 ◽  
Author(s):  
Fetulhak Abdurahman ◽  
Kinde Fante Anlay ◽  
Mohammed Aliy
Keyword(s):  
Object Detection ◽  
Malaria Parasite ◽  
Clustering Algorithm ◽  
State Of The Art ◽  
Malaria Diagnosis ◽  
Learning Ability ◽  
Background Information ◽  
Small Object ◽  
Microscopic Images ◽  
Resource Setting

Abstract Background Information: Manual microscopic examination is still the "golden standard" for malaria diagnosis. The challenge in the manual microscopy is the fact that its accuracy, consistency and speed of diagnosis depends on the skill of the laboratory technician. It is difficult to get highly skilled laboratory technicians in the remote areas of developing countries. In order to alleviate this problem, in this paper, we propose and investigate the state-of-the-art one-stage and two-stage object detection algorithms for automated malaria parasite screening from thick blood slides. Methods: YOLOV3 and YOLOV4 are state-of-the-art object detectors both in terms of accuracy and speed; however, they are not optimized for the detection of small objects such as malaria parasite in microscopic images. To deal with these challenges, we have modified YOLOV3 and YOLOV4 models by increasing the feature scale and by adding more detection layers, without notably decreasing their detection speed. We have proposed one modified YOLOV4 model, called YOLOV4-MOD and two modified models for YOLOV3, which are called YOLOV3-MOD1 and YOLOV3-MOD2. In addition, we have generated new anchor box scales and sizes by using the K-means clustering algorithm to exploit small object detection learning ability of the models.Results: The proposed modified YOLOV3 and YOLOV4 algorithms are evaluated on publicly available malaria dataset and achieve state-of-the-art accuracy by exceeding the performance of their original versions, Faster R-CNN and SSD in terms of mean average precision (mAP), recall, precision, F1 score, and average IOU. For 608 x 608 input resolution YOLOV4-MOD achieves the best detection performance among all the other models with mAP of 96.32%. For the same input resolution YOLOV3-MOD2 and YOLOV3-MOD1 achieved mAP of 96.14% and 95.46% respectively. Conclusions: Th experimental results demonstrate that the performance of the proposed modified YOLOV3 and YOLOV4 models are reliable to be applied for detection of malaria parasite from images that can be captured by smartphone camera over the microscope eyepiece. The proposed system can be easily deployed in low-resource setting and it can save lives.

scholarly journals Malaria Parasite Detection in Thick Blood Smear Microscopic Images Using Modified YOLOV3 and YOLOV4 Models

2020 ◽  
Author(s):  
Fetulhak Abdurahman ◽  
Kinde Fante Anlay ◽  
Mohammed Aliy
Keyword(s):  
Object Detection ◽  
Malaria Parasite ◽  
Clustering Algorithm ◽  
State Of The Art ◽  
Malaria Diagnosis ◽  
Learning Ability ◽  
Background Information ◽  
Small Object ◽  
Microscopic Images ◽  
Resource Setting

Abstract Background Information: Manual microscopic examination is still the ”golden standard” for malaria diagnosis. The challenge in the manual microscopy is the fact that its accuracy, consistency and speed of diagnosis depends on the skill of the laboratory technician. It is difficult to get highly skilled laboratory technicians in the remote areas of developing countries. In order to alleviate this problem, in this paper, we propose and investigate the state-of-the-art one-stage and two-stage object detection algorithms for automated malaria parasite screening from thick blood slides. Methods: YOLOV3 and YOLOV4 are state-of-the-art object detectors both in terms of accuracy and speed; however, they are not optimized for the detection of small objects such as malaria parasite in microscopic images. To deal with these challenges, we have modified YOLOV3 and YOLOV4 models by increasing the feature scale and by adding more detection layers, without notably decreasing their detection speed. We have proposed one modified YOLOV4 model, called YOLOV4-MOD and two modified models for YOLOV3, which are called YOLOV3-MOD1 and YOLOV3-MOD2. In addition, we have generated new anchor box scales and sizes by using the K-means clustering algorithm to exploit small object detection learning ability of the models. Results: The proposed modified YOLOV3 and YOLOV4 algorithms are evaluated on publicly available malaria dataset and achieve state-of-the-art accuracy by exceeding the performance of their original versions, Faster R-CNN and SSD in terms of mean average precision (mAP), recall, precision, F1 score, and average IOU. For 608 x 608 input resolution YOLOV4-MOD achieves the best detection performance among all the other models with mAP of 96.32%. For the same input resolution YOLOV3-MOD2 and YOLOV3-MOD1 achieved mAP of 96.14% and 95.46% respectively. Conclusions: Th experimental results demonstrate that the performance of the proposed modified YOLOV3 and YOLOV4 models are reliable to be applied for detection of malaria parasite from images that can be captured by smartphone camera over the microscope eyepiece. The proposed system can be easily deployed in low-resource setting and it can save lives.

scholarly journals Malaria parasite detection in thick blood smear microscopic images using modified YOLOV3 and YOLOV4 models

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Fetulhak Abdurahman ◽  
Kinde Anlay Fante ◽  
Mohammed Aliy
Keyword(s):  
Object Detection ◽  
Malaria Parasite ◽  
Blood Smear ◽  
Clustering Algorithm ◽  
State Of The Art ◽  
Detection Accuracy ◽  
Small Object ◽  
Thick Blood Smear ◽  
Malaria Parasites ◽  
Microscopic Images

Abstract Background Manual microscopic examination of Leishman/Giemsa stained thin and thick blood smear is still the “gold standard” for malaria diagnosis. One of the drawbacks of this method is that its accuracy, consistency, and diagnosis speed depend on microscopists’ diagnostic and technical skills. It is difficult to get highly skilled microscopists in remote areas of developing countries. To alleviate this problem, in this paper, we propose to investigate state-of-the-art one-stage and two-stage object detection algorithms for automated malaria parasite screening from microscopic image of thick blood slides. Results YOLOV3 and YOLOV4 models, which are state-of-the-art object detectors in accuracy and speed, are not optimized for detecting small objects such as malaria parasites in microscopic images. We modify these models by increasing feature scale and adding more detection layers to enhance their capability of detecting small objects without notably decreasing detection speed. We propose one modified YOLOV4 model, called YOLOV4-MOD and two modified models of YOLOV3, which are called YOLOV3-MOD1 and YOLOV3-MOD2. Besides, new anchor box sizes are generated using K-means clustering algorithm to exploit the potential of these models in small object detection. The performance of the modified YOLOV3 and YOLOV4 models were evaluated on a publicly available malaria dataset. These models have achieved state-of-the-art accuracy by exceeding performance of their original versions, Faster R-CNN, and SSD in terms of mean average precision (mAP), recall, precision, F1 score, and average IOU. YOLOV4-MOD has achieved the best detection accuracy among all the other models with a mAP of 96.32%. YOLOV3-MOD2 and YOLOV3-MOD1 have achieved mAP of 96.14% and 95.46%, respectively. Conclusions The experimental results of this study demonstrate that performance of modified YOLOV3 and YOLOV4 models are highly promising for detecting malaria parasites from images captured by a smartphone camera over the microscope eyepiece. The proposed system is suitable for deployment in low-resource setting areas.

scholarly journals An Evaluation of Deep Learning Methods for Small Object Detection

2020 ◽  
Vol 2020 ◽  
pp. 1-18 ◽  
Author(s):  
Nhat-Duy Nguyen ◽  
Tien Do ◽  
Thanh Duc Ngo ◽  
Duy-Dinh Le
Keyword(s):  
Deep Learning ◽  
Object Detection ◽  
State Of The Art ◽  
Rapid Development ◽  
Empirical Evaluation ◽  
Grid Cell ◽  
Small Object ◽  
Feature Maps ◽  
Comparative Results ◽  
Small Object Detection

Small object detection is an interesting topic in computer vision. With the rapid development in deep learning, it has drawn attention of several researchers with innovations in approaches to join a race. These innovations proposed comprise region proposals, divided grid cell, multiscale feature maps, and new loss function. As a result, performance of object detection has recently had significant improvements. However, most of the state-of-the-art detectors, both in one-stage and two-stage approaches, have struggled with detecting small objects. In this study, we evaluate current state-of-the-art models based on deep learning in both approaches such as Fast RCNN, Faster RCNN, RetinaNet, and YOLOv3. We provide a profound assessment of the advantages and limitations of models. Specifically, we run models with different backbones on different datasets with multiscale objects to find out what types of objects are suitable for each model along with backbones. Extensive empirical evaluation was conducted on 2 standard datasets, namely, a small object dataset and a filtered dataset from PASCAL VOC 2007. Finally, comparative results and analyses are then presented.

scholarly journals Detection of Small Ship Objects Using Anchor Boxes Cluster and Feature Pyramid Network Model for SAR Imagery

2020 ◽  
Vol 8 (2) ◽  
pp. 112 ◽  
Author(s):  
Peng Chen ◽  
Ying Li ◽  
Hui Zhou ◽  
Bingxin Liu ◽  
Peng Liu
Keyword(s):  
Object Detection ◽  
Clustering Algorithm ◽  
Weather Conditions ◽  
Object Identification ◽  
Maritime Transportation ◽  
Small Object ◽  
Sar Images ◽  
Feature Pyramid ◽  
Sar Imagery ◽  
Small Ship

The synthetic aperture radar (SAR) has a special ability to detect objects in any climate and weather conditions. Consequently, SAR images are widely used in maritime transportation safety and fishery law enforcement for maritime object detection. Currently, deep-learning models are being extensively used for the detection of objects from images. Among them, the feature pyramid network (FPN) uses pyramids for representing semantic information regardless of the scale and has an improved accuracy of object detection. It is also suitable for the detection of multiple small ship objects in SAR images. This study aims to resolve the problems associated with small-object and multi-object ship detection in complex scenarios e.g., when a ship nears the port, by proposing a detection method based on an optimized FPN model. The feature pyramid model is first embedded in a traditional region proposal network (RPN) and mapped into a new feature space for object identification. Subsequently, the k-means clustering algorithm based on the shape similar distance (SSD) measure is used to optimize the FPN. Initial anchor boxes and tests are created using the SAR ship dataset. Experimental results show that the proposed algorithm for object detection shows an accuracy of 98.62%. Compared with Yolo, the RPN based on VGG/ResNet, FPN based on VGG/ResNet, and other models in complex scenarios, the proposed model shows a higher accuracy rate and better overall performance.

scholarly journals Survey and Performance Analysis of Object Detection in Challenging Environments

2021 ◽  
Author(s):  
Muhammad Ahmed ◽  
Khurram Azeem Hashmi ◽  
Alain Pagani ◽  
Marcus Liwicki ◽  
Didier Stricker ◽  
...  
Keyword(s):  
Performance Analysis ◽  
Object Detection ◽  
State Of The Art ◽  
Detection System ◽  
Rapid Development ◽  
Background Information ◽  
Comprehensive Overview ◽  
Detection Algorithms ◽  
And Performance ◽  
Qualitative Performance

Recent progress in deep learning has led to accurate and efficient generic object detection networks. Training of highly reliable models depends on large datasets with highly textured and rich images. However, in real-world scenarios, the performance of the generic object detection system decreases when (i) occlusions hide the objects, (ii) objects are present in low-light images, or (iii) they are merged with background information. In this paper, we refer to all these situations as challenging environments. With the recent rapid development in generic object detection algorithms, notable progress has been observed in the field of object detection in challenging environments. However, there is no consolidated reference to cover state-of-the-art in this domain. To the best of our knowledge, this paper presents the first comprehensive overview, covering recent approaches that have tackled the problem of object detection in challenging environments. Furthermore, we present the quantitative and qualitative performance analysis of these approaches and discuss the currently available challenging datasets. Moreover, this paper investigates the performance of current state-of-the-art generic object detection algorithms by benchmarking results on the three well-known challenging datasets. Finally, we highlight several current shortcomings and outline future directions.

scholarly journals Object Detection Based on Center Point Proposals

Electronics ◽  
2020 ◽  
Vol 9 (12) ◽  
pp. 2075
Author(s):  
Hao Chen ◽  
Hong Zheng
Keyword(s):  
Object Detection ◽  
Detection Method ◽  
State Of The Art ◽  
Input Image ◽  
Small Object ◽  
Average Precision ◽  
Shallow Layer ◽  
Center Point ◽  
Speed And Accuracy

Anchor-based detectors are widely adopted in object detection. To improve the accuracy of object detection, multiple anchor boxes are intensively placed on the input image, yet most of them are invalid. Although anchor-free methods can reduce the number of useless anchor boxes, the invalid ones still occupy a high proportion. On this basis, this paper proposes an object-detection method based on center point proposals to reduce the number of useless anchor boxes while improving the quality of anchor boxes, balancing the proportion of positive and negative samples. By introducing the differentiation module in the shallow layer, the new method can alleviate the problem of missing detection caused by overlapping of center points. When trained and tested on COCO (Common Objects in Context) dataset, this algorithm records an increase of about 2% in APS (Average Precision of Small Object), reaching 27.8%. The detector designed in this study outperforms most of the state-of-the-art real-time detectors in speed and accuracy trade-off, achieving the AP of 43.2 in 137 ms.

scholarly journals Real-Time Small Drones Detection Based on Pruned YOLOv4

Sensors ◽  
2021 ◽  
Vol 21 (10) ◽  
pp. 3374
Author(s):  
Hansen Liu ◽  
Kuangang Fan ◽  
Qinghua Ouyang ◽  
Na Li
Keyword(s):  
Object Detection ◽  
Real Time ◽  
Processing Speed ◽  
State Of The Art ◽  
Detection Methods ◽  
Detection Accuracy ◽  
Small Object ◽  
Art Object ◽  
Real Time Detection ◽  
Small Object Detection

To address the threat of drones intruding into high-security areas, the real-time detection of drones is urgently required to protect these areas. There are two main difficulties in real-time detection of drones. One of them is that the drones move quickly, which leads to requiring faster detectors. Another problem is that small drones are difficult to detect. In this paper, firstly, we achieve high detection accuracy by evaluating three state-of-the-art object detection methods: RetinaNet, FCOS, YOLOv3 and YOLOv4. Then, to address the first problem, we prune the convolutional channel and shortcut layer of YOLOv4 to develop thinner and shallower models. Furthermore, to improve the accuracy of small drone detection, we implement a special augmentation for small object detection by copying and pasting small drones. Experimental results verify that compared to YOLOv4, our pruned-YOLOv4 model, with 0.8 channel prune rate and 24 layers prune, achieves 90.5% mAP and its processing speed is increased by 60.4%. Additionally, after small object augmentation, the precision and recall of the pruned-YOLOv4 almost increases by 22.8% and 12.7%, respectively. Experiment results verify that our pruned-YOLOv4 is an effective and accurate approach for drone detection.

Deep learning for small object detection in images

2020 ◽  
Author(s):  
◽  
Yang Liu
Keyword(s):  
Deep Learning ◽  
Object Detection ◽  
State Of The Art ◽  
Aerial Imagery ◽  
Small Object ◽  
Learning Models ◽  
Learning Methods ◽  
Bounding Boxes ◽  
Small Object Detection ◽  
Instance Segmentation

[ACCESS RESTRICTED TO THE UNIVERSITY OF MISSOURI AT REQUEST OF AUTHOR.] With the rapid development of deep learning in computer vision, especially deep convolutional neural networks (CNNs), significant advances have been made in recent years on object recognition and detection in images. Highly accurate detection results have been achieved for large objects, whereas detection accuracy on small objects remains to be low. This dissertation focuses on investigating deep learning methods for small object detection in images and proposing new methods with improved performance. First, we conducted a comprehensive review of existing deep learning methods for small object detections, in which we summarized and categorized major techniques and models, identified major challenges, and listed some future research directions. Existing techniques were categorized into using contextual information, combining multiple feature maps, creating sufficient positive examples, and balancing foreground and background examples. Methods developed in four related areas, generic object detection, face detection, object detection in aerial imagery, and segmentation, were summarized and compared. In addition, the performances of several leading deep learning methods for small object detection, including YOLOv3, Faster R-CNN, and SSD, were evaluated based on three large benchmark image datasets of small objects. Experimental results showed that Faster R-CNN performed the best, while YOLOv3 was a close second. Furthermore, a new deep learning method, called Retina-context Net, was proposed and outperformed state-of-the art one-stage deep learning models, including SSD, YOLOv3 and RetinaNet, on the COCO and SUN benchmark datasets. Secondly, we created a new dataset for bird detection, called Little Birds in Aerial Imagery (LBAI), from real-life aerial imagery. LBAI contains birds with sizes ranging from 10 by 10 pixels to 40 by 40 pixels. We adapted and applied several state-of-the-art deep learning models to LBAI, including object detection models such as YOLOv2, SSH, and Tiny Face, and instance segmentation models such as U-Net and Mask R-CNN. Our empirical results illustrated the strength and weakness of these methods, showing that SSH performed the best for easy cases, whereas Tiny Face performed the best for hard cases with cluttered backgrounds. Among small instance segmentation methods, U-Net achieved slightly better performance than Mask R-CNN. Thirdly, we proposed a new graph neural network-based object detection algorithm, called GODM, to take the spatial information of candidate objects into consideration in small object detection. Instead of detecting small objects independently as the existing deep learning methods do, GODM treats the candidate bounding boxes generated by existing object detectors as nodes and creates edges based on the spatial or semantic relationship between the candidate bounding boxes. GODM contains four major components: node feature generation, graph generation, node class labelling, and graph convolutional neural network model. Several graph generation methods were proposed. Experimental results on the LBDA dataset show that GODM outperformed existing state-of-the-art object detector Faster R-CNN significantly, up to 12% better in accuracy. Finally, we proposed a new computer vision-based grass analysis using machine learning. To deal with the variation of lighting condition, a two-stage segmentation strategy is proposed for grass coverage computation based on a blackboard background. On a real world dataset we collected from natural environments, the proposed method was robust to varying environments, lighting, and colors. For grass detection and coverage computation, the error rate was just 3%.

scholarly journals Survey and Performance Analysis of Deep Learning Based Object Detection in Challenging Environments

Sensors ◽  
2021 ◽  
Vol 21 (15) ◽  
pp. 5116
Author(s):  
Muhammad Ahmed ◽  
Khurram Azeem Hashmi ◽  
Alain Pagani ◽  
Marcus Liwicki ◽  
Didier Stricker ◽  
...  
Keyword(s):  
Deep Learning ◽  
Performance Analysis ◽  
Object Detection ◽  
State Of The Art ◽  
Detection System ◽  
Rapid Development ◽  
Background Information ◽  
Comprehensive Overview ◽  
Detection Algorithms ◽  
And Performance

Recent progress in deep learning has led to accurate and efficient generic object detection networks. Training of highly reliable models depends on large datasets with highly textured and rich images. However, in real-world scenarios, the performance of the generic object detection system decreases when (i) occlusions hide the objects, (ii) objects are present in low-light images, or (iii) they are merged with background information. In this paper, we refer to all these situations as challenging environments. With the recent rapid development in generic object detection algorithms, notable progress has been observed in the field of deep learning-based object detection in challenging environments. However, there is no consolidated reference to cover the state of the art in this domain. To the best of our knowledge, this paper presents the first comprehensive overview, covering recent approaches that have tackled the problem of object detection in challenging environments. Furthermore, we present a quantitative and qualitative performance analysis of these approaches and discuss the currently available challenging datasets. Moreover, this paper investigates the performance of current state-of-the-art generic object detection algorithms by benchmarking results on the three well-known challenging datasets. Finally, we highlight several current shortcomings and outline future directions.

Segmentation of SAR Image using Fuzzy C-Means and Filters

2020 ◽  
Vol 8 (1) ◽  
pp. 84-90
Author(s):  
R. Lalchhanhima ◽  
◽  
Debdatta Kandar ◽  
R. Chawngsangpuii ◽  
Vanlalmuansangi Khenglawt ◽  
...  
Keyword(s):  
Clustering Algorithm ◽  
State Of The Art ◽  
Speckle Noise ◽  
Synthetic Aperture Radar Image ◽  
Synthetic Aperture ◽  
Sar Image ◽  
Spatial Filters ◽  
Fuzzy C Means ◽  
Automatic Clustering ◽  
Intensity Information

Fuzzy C-Means is an unsupervised clustering algorithm for the automatic clustering of data. Synthetic Aperture Radar Image Segmentation has been a challenging task because of the presence of speckle noise. Therefore the segmentation process can not directly rely on the intensity information alone but must consider several derived features in order to get satisfactory segmentation results. In this paper, it is attempted to use the fuzzy nature of classification for the purpose of unsupervised region segmentation in which FCM is employed. Different features are obtained by filtering of the image by using different spatial filters and are selected for segmentation criteria. The segmentation performance is determined by the accuracy compared with a different state of the art techniques proposed recently.

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