scholarly journals Natural Hybridization between Persian Walnut and Chinese Walnut Revealed by Simple Sequence Repeat Markers

2016 ◽  
Vol 141 (2) ◽  
pp. 146-150 ◽  
Author(s):  
Zhan Shu ◽  
Xue Zhang ◽  
Dianqiong Yu ◽  
Sijia Xue ◽  
Hua Wang

Hybridization between species of the genus Juglans is common because of weak reproductive isolation mechanisms between closely related species with sympatric distributions. In this research, we investigated the possibility of naturally occurring interspecific hybrids between two species in the genus Juglans: persian walnut (Juglans regia) and chinese walnut (Juglans cathayensis). We used 12 pairs of microsatellite markers to analyze introgression between the two species. All amplified microsatellites were polymorphic in the two species. The result of Bayesian admixture analyses showed that introgression between the two species is rare; only three of nine individuals tentatively identified as hybrids, based on intermediate morphological characteristics, were defined as mixed genotypes. The other six putative hybrids and 156 morphologically pure individuals showed no sign of introgression.

1992 ◽  
Vol 70 (5) ◽  
pp. 900-909 ◽  
Author(s):  
Kevin B. Jensen ◽  
S. L. Hatch ◽  
J. K. Wipff

Cytological and morphological characteristics of a new species, Pseudoroegneria deweyi K. B. Jensen, from the Karachayevo-Cherkesskaya Avtonomnaya Oblast' Region of Russia are described. This species is cytologically stable, genomically similar to Pseudoroegneria tauri, highly fertile (cross-pollinating), and morphologically unique compared with most other species in the genus. Pseudoroegneria deweyi differs from other closely related species in the number of rachis nodes in the inflorescence. Pseudoroegneria stipifolia (2n = 2x = 14, SS) and Agropyron cristatum (2n = 2x = 14, PP) were used as male parents in crosses with P. deweyi. All three P. deweyi accessions studied were tetraploids (2n = 28) and behaved meiotically as allotetraploids with a mean chromosome association of 0.03 I + 13.30 II + 0.03 III + 0.26 IV per cell. In the hybrid P. deweyi × A. cristatum, average chromosome association was 5.92 I + 4.55 II + 1.83 III + 0.09 IV per cell, while the average chromosome association in P. deweyi × P. stipifolia was 4.98 I + 5.23 II + 1.73 III 0.04 IV per cell. Pseudoroegneria deweyi joins P. tauri as the only other known naturally occurring species with the genomic formula of SSPP. Cluster analysis of 21 morphological characters supports the inclusion of P. deweyi as part of the genus Pseudoroegneria rather than Agropyron. Key words: Agropyron, Pseudoroegneria, chromosome pairing, meiosis, Triticeae, new species.


Plant Disease ◽  
2020 ◽  
Author(s):  
Virág Varjas ◽  
Tamás Lakatos ◽  
Tímea Tóth ◽  
Csilla Kovács

Persian walnut (Juglans regia L.) fruit with preharvest anthracnose symptoms, necrotic fruit stalks, and twigs with necrotic buds, and peaks were collected in a Hungarian orchard next to Nágocs, in September 2018. Disease incidence was approximately 15% on a Hungarian bred walnut cultivar ‘Milotai 10’. Similar symptoms were found on Persian walnut in other locations (eg. Milota, Érd, Sarród, and Kocs). Acervuli were observed on necrotic lesions on fruit, and twigs with pale orange conidial masses. Conidia were hyaline, unicellular, and fusiform. Morphometric measurements of conidia showed mean length ± SD × width ± SD = 15.9 ± 1.7 × 4.5 ± 0.4 μm, length/width ratio 1:0.3 (n=100). The fungus was isolated from conidial masses on potato dextrose agar (PDA) medium amended with Chlorampenicol (25 mg/L). A total of 12 isolates were obtained as pure cultures by single-spore isolations and incubated at 23°C in dark for 10 days. The colonies were white to gray or grayish-orange on the upper side and with black spots on the reverse side. The isolates showed morphological characteristics of Colletotrichum acutatum in sensu lato (Jayawardena et al. 2016). Molecular analyses were conducted to identify the exact species. Internal transcribed spacer (ITS) region, actin (ACT), and calmodulin (CAL) partial genes were amplified by ITS1F/ITS4R, ACT512F/ACT783R and CAL1/CAL2 primers (White at al. 1990, Carbone and Kohn 1999, O’Donnell et al. 2000). The sequences of ITS region (GenBank Accession Nos: MK367398-99, MK367401-02) showed 100% identity with C. godetiae sequence. Based on ACT gene (GenBank Accession Nos: MK415991-92, MK415994-95) were 100% identity with the deposited C. godetiae type strains from walnut. The obtained sequences of CAL gene (GenBank Accession Nos: MK415998-99, MK416001-02) were same and showed 100% with other C. godetiae sequences from other host plants. The fungus was identified as Colletotrichum godetiae Neerg. Pathogenicity tests were accomplished in the field and under laboratory conditions (25°C on thermostat) on 10 green ‘Milotai 10’ walnut fruit, and 10 walnut twigs each. Tests were conducted on living trees, collected fruit, and two-year-old twigs by inserting mycelial agar plugs (5 mm in diameter) onto wounded pericarp tissues, which were then wrapped with wet cotton and parafilm. Wounded tissues on 5 fruit and 5 two-year-old twigs were treated with non-colonized PDA plugs as noninoculated controls. After 14 d necrotic lesions 9 to 17 mm in diameter developed on fruit on living trees. Lengths of 12 to 17 mm and width of 7 to 12 mm necrosis was measured on phloem of walnut twigs, and almost two times larger in cambium. No necrosis developed around control wounds. Koch's postulates were fulfilled with the reisolation of the pathogen from symptomatic tissues, isolates were identical morphologically and by sequence analysis of ITS region, ACT, and CAL partial genes to the original isolates. Damm et al. (2012) described two C. godetiae strains associated with walnut, one isolated in Austria and another one of unknown origin. An epidemic event of walnut anthracnose caused by Colletotrichum species mainly C. godetiae was reported in France (Da Lio et al. 2018). The pathogen was isolated from nuts, buds, insects, and stems. To our knowledge, this is the first report of anthracnose of walnut fruit caused by C. godetiae in Hungary. Anthracnose caused by C. godetiae, and previously reported C. fioriniae (Varjas et al. 2019) is becoming an increasing preharvest problem on Persian walnut in Hungary.


Forests ◽  
2019 ◽  
Vol 10 (11) ◽  
pp. 965 ◽  
Author(s):  
Dang ◽  
Yue ◽  
Zhang ◽  
Zhao ◽  
Zhao

Gene introgression usually results from natural hybridization occurring among closely related species in sympatric populations. In this study, we discussed two rare and frequent gene flow phenomena between three species of Juglans plants and analyzed the possible causes for the difference. We collected 656 individuals from 40 populations of Persian walnut (Juglans regia L.), Chinese walnut (J. cathayensis Dode), and Iron walnut (J. sigillata Dode) that were genotyped at 17 expressed sequence tag simple sequence repeat (EST-SSR) loci to analyze the introgressions between J. regia and J. cathayensis, and J. regia and J. sigillata. Our study compared the spatial patterns of expected heterozygosity (HE), allelic richness (Rs), and private allele richness (PAR) so as to vividly infer the biogeographic history of related species of Juglans in the two regions. The results of the PCoA, UPGMA, and STRUCTURE analyses showed that all J. regia and J. sigillata populations clustered into one group, and the J. cathayensis populations clustered into the other group. The results of the historical gene flow analysis indicated that J. regia and J. sigillata have no genetic barriers, and the directional gene flow is mainly from J. regia to J. sigillata. For the three species of Juglans, all the above results indicated that gene flow was common among the same group of Juglans, and only rare and low-level gene flow appeared in distinct groups. Therefore, our study revealed multiple phenomena of gene flow and introgression among closely related species in sympatric populations, thereby providing a theoretical basis for the genetic evolution of the genus Juglans.


2019 ◽  
Vol 10 ◽  
Author(s):  
Annarita Marrano ◽  
Gina M. Sideli ◽  
Charles A. Leslie ◽  
Hao Cheng ◽  
David B. Neale

2015 ◽  
Vol 2015 ◽  
pp. 1-6 ◽  
Author(s):  
Congzhao Fan ◽  
Xiaojin Li ◽  
Jun Zhu ◽  
Jingyuan Song ◽  
Hui Yao

The medicinal plantFerulahas been widely used in Asian medicine, especially in Uyghur medicine in Xinjiang, China. Given that various substitutes and closely related species have similar morphological characteristics,Ferulais difficult to distinguish based on morphology alone, thereby causing confusion and threatening the safe use ofFerula. In this study, internal transcribed spacer 2 (ITS2) sequences were analyzed and assessed for the accurate identification of two salableFerulaspecies (Ferula sinkiangensisandFerula fukangensis) and eight substitutes or closely related species. Results showed that the sequence length of ITS2 ranged from 451 bp to 45 bp, whereas guanine and cytosine contents (GC) were from 53.6% to 56.2%. A total of 77 variation sites were detected, including 63 base mutations and 14 insertion/deletion mutations. The ITS2 sequence correctly identified 100% of the samples at the species level using the basic local alignment search tool 1 and nearest-distance method. Furthermore, neighbor-joining tree successfully identified the genuine plantsF. sinkiangensisandF. fukangensisfrom their succedaneum and closely related species. These results indicated that ITS2 sequence could be used as a valuable barcode to distinguish Uyghur medicineFerulafrom counterfeits and closely related species. This study may broaden DNA barcoding application in the Uyghur medicinal plant field.


1997 ◽  
Vol 48 (5) ◽  
pp. 401 ◽  
Author(s):  
Jesse D. Ronquillo ◽  
Toshio Saisho

Gravid females of Metapenaeopsis barbata spawned in the laboratory by natural means and the larvae were reared from hatching to postlarval stage at 27·0–29·8˚C and 33·5–34·5 g kg -1 salinity. The larvae metamorphosed into first postlarvae, with a survival rate of up to 98·4%, after about 10 days following hatching and subsistence on only an algal diet of Tetraselmis tetrathele and Chaetoceros gracilis. Six naupliar stages, three protozoeal stages, three mysis stages and the first postlarval stage are described and illustrated. On the basis of morphological characteristics, larval stages of M. barbata can be distinguished from similar stages of closely related species in the family Penaeidae. As inferred from the morphology of the larval feeding apparatus, M. barbata is still a filter-feeder even at the first postlarval stage.


2010 ◽  
pp. 99-104 ◽  
Author(s):  
M. Golzari ◽  
M. Rahemi ◽  
K. Vahdati ◽  
D. Hassani
Keyword(s):  

2021 ◽  
Author(s):  
Masoomeh Hosseini Nickravesh ◽  
Kourosh Vahdati ◽  
fatemeh amini ◽  
Reza Amiri ◽  
Keith Woeste

Abstract The utility of seventeen Microsatellite (SSR) markers and fifteen inter simple sequence repeats (ISSR) markers for the identification of twenty eight ramets of 11 varieties of walnut (Juglans regia) was explored. Thirty nine individual genomes were screened using 61 and 38 scorable fragments from SSR and ISSR markers, respectively. The least polymorphic SSR locus was WGA004 (two alleles) and the most polymorphic (5 alleles) was WGA276. Polymorphism information content values ranged from 0.08 (WGA004) to 0.43 (WGA032) in SSR markers and from 0.11 (AGA (AC)7) to 0.49 (CAC(TGT)5) in ISSR markers, with an average of 0.29 and 0.19, respectively. In most cases, grafted varieties with identical names also had the same microsatellites profile. The principal coordinate analysis and clustering (UPGMA) based on the combined marker set emphasized two failures in grafting or off-types, ramets identified as Serr 4 (S4) and Vina 1 (V1). The presence of two off-type ramets in the walnut research orchard emphasizes the importance of using molecular certification for proving true-to-type of walnut orchards. Using 13 polymorphic SSRs, we tabulated a DNA fingerprint chart of 11 walnut varieties. Except for ‘Chandler’, each cultivar could be distinguished using a combination of only two SSR loci. The 13 SSRs markers evaluated in this study could be used in future to identify clones produced from the varieties.


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