scholarly journals Contribution to knowledge about genome size in members of the family Asteraceae from Turkey: First assessments in 17 taxa, with chromosome counts for nine taxa

2020 ◽  
Vol 44 (1) ◽  
pp. 47-53
Author(s):  
Huseyin Inceer ◽  
Nursen Kalmuk
Keyword(s):  
Flow Cytometry ◽  
Genome Size ◽  
Chromosome Numbers ◽  
Evolutionary Significance ◽  
Chromosome Counts ◽  
The Family ◽  
First Time

In this study, we report genome size (C-values) estimated using flow cytometry for 18 taxa of Asteraceae from Turkey, 17 of which are here assessed for the first time. The studied taxa belong to the genera Achillea (one species), Anthemis (one subspecies), Tanacetum (four taxa) and Crepis (12 taxa). Additionally, chromosome numbers of nine taxa of Crepis are provided, four counts being new reports and the remainder confirming previous data. The 2C-values of the studied taxa range from 2.08 to 11.06 pg, which represent more than fivefold variation. The systematic and evolutionary significance of genome size is discussed within the framework of the results obtained in this study.

scholarly journals New chromosome counts and genome size estimates for 28 species of Taraxacum sect. Taraxacum

2018 ◽  
Vol 12 (3) ◽  
pp. 403-420 ◽  
Author(s):  
Petra Macháčková ◽  
Ľuboš Majeský ◽  
Michal Hroneš ◽  
Eva Hřibová ◽  
Bohumil Trávníček ◽  
...  
Keyword(s):  
Genome Size ◽  
Dna Content ◽  
Chromosome Numbers ◽  
Chromosome Counts ◽  
Average Value ◽  
Sexual And Asexual Reproduction ◽  
The World ◽  
Reproduction Strategies ◽  
First Time ◽  
Size Estimates

The species-rich and widespread genusTaraxacumF. H. Wiggers, 1780 (Asteraceae subfamily Cichorioideae) is one of the most taxonomically complex plant genera in the world, mainly due to its combination of different sexual and asexual reproduction strategies. Polyploidy is usually confined to apomictic microspecies, varying from 3x to 6x (rarely 10x). In this study, we focused on Taraxacum sect.Taraxacum(= T.sect.Ruderalia;T.officinalegroup), i.e., the largest group within the genus. We counted chromosome numbers and measured the DNA content for species sampled in Central Europe, mainly in Czechia. The chromosome number of the 28 species (T.aberransHagendijk, Soest & Zevenbergen, 1974,T.atrovirideŠtěpánek & Trávníček, 2008,T.atroxKirschner & Štěpánek, 1997,T.baeckiiformeSahlin, 1971,T.chrysophaenumRailonsala, 1957,T.coartatumG.E. Haglund, 1942,T.corynodesG.E. Haglund, 1943,T.crassumH. Øllgaard & Trávníček, 2003,T.deltoidifronsH. Øllgaard, 2003,T.diastematicumMarklund, 1940,T.gesticulansH. Øllgaard, 1978,T.glossodonSonck & H. Øllgaard, 1999,T.guttigestansH. Øllgaard in Kirschner & Štěpánek, 1992,T.huelphersianumG.E. Haglund, 1935,T.ingensPalmgren, 1910,T.jugiferumH. Øllgaard, 2003,T.laticordatumMarklund, 1938,T.lojoenseH. Lindberg, 1944 (=T.debrayiHagendijk, Soest & Zevenbergen, 1972,T.lippertianumSahlin, 1979),T.lucidifronsTrávníček, ineditus,T.obtusifronsMarklund, 1938,T.ochrochlorumG.E. Haglund, 1942,T.ohlseniiG.E. Haglund, 1936,T.perdubiumTrávníček, ineditus,T.praestabileRailonsala, 1962,T.sepulcrilobumTrávníček, ineditus,T.sertatumKirschner, H. Øllgaard & Štěpánek, 1997,T.subhuelphersianumM.P. Christiansen, 1971,T.valensMarklund, 1938) is 2n = 3x = 24. The DNA content ranged from 2C = 2.60 pg (T.atrox) to 2C = 2.86 pg (T.perdubium), with an average value of 2C = 2.72 pg. Chromosome numbers are reported for the first time for 26 species (all butT.diastematicumandT.obtusifrons), and genome size estimates for 26 species are now published for the first time.

scholarly journals Genome Size Estimates and Chromosome Numbers of Callicarpa L. (Lamiaceae)

HortScience ◽  
2011 ◽  
Vol 46 (4) ◽  
pp. 567-570 ◽  
Author(s):  
Ryan N. Contreras ◽  
John M. Ruter
Keyword(s):  
Flow Cytometry ◽  
Chromosome Number ◽  
Genome Size ◽  
Chromosome Numbers ◽  
Chromosome Counts ◽  
Ploidy Levels ◽  
Flow Cytometry Data ◽  
Carbol Fuchsin ◽  
Cross Compatibility ◽  
Size Estimates

Genome size estimates and chromosome number information can be useful for studying the evolution or taxonomy of a group and also can be useful for plant breeders in predicting cross-compatibility. Callicarpa L. is a group of ≈140 species with nearly worldwide distribution. There are no estimates of genome size in the literature and the information on chromosome numbers is limited. Genome size estimates based on flow cytometry are reported here for 16 accessions of Callicarpa comprising 14 species in addition to chromosome counts on six species. Chromosome counts were conducted by staining meristematic cells of roots tips using modified carbol fuchsin. Holoploid genome size estimates ranged from 1.34 pg to 3.48 pg with a mean of 1.74 pg. Two tetraploids (2n = 4x = 68; C. salicifolia P'ei & W. Z. Fang and C. macrophylla Vahl GEN09-0081) were identified based on holoploid genome size and confirmed by chromosome counts. There was little variation among species for monoploid genome size. 1Cx-values ranged from 0.67 pg to 0.88 pg with a mean of 0.77 pg. Chromosome counts for six species revealed a base chromosome number of x = 17. Callicarpa chejuensis Y. H. Chung & H. Kim, C. japonica Thunb. ‘Leucocarpa’, C. longissima Merr., and C. rubella Lindl. were confirmed as diploids (2n = 2x = 34). Cytology supported flow cytometry data that C. salicifolia and C. macrophylla GEN09-0081 were tetraploids. The two accessions of C. macrophylla included in the study were found to be of different ploidy levels. The presence of two ploidy levels among and within species indicates that polyploidization events have occurred in the genus.

Does polyploidy occur in central European species of the family Sphaeriidae (Mollusca: Bivalvia)?

2010 ◽  
Vol 5 (6) ◽  
pp. 777-784 ◽  
Author(s):  
Tereza Kořínková ◽  
Alena Morávková
Keyword(s):  
Chromosome Numbers ◽  
Related Species ◽  
Chromosomal Rearrangements ◽  
Small Chromosome ◽  
Time Analysis ◽  
Chromosome Counts ◽  
The Family ◽  
Dna Contents ◽  
Acrocentric Chromosomes ◽  
First Time

AbstractSome representatives of the bivalve family Sphaeriidae are assumed to be polyploid. In this study, 11 sphaeriid species (nine of the genus Pisidium, one of Musculium, and one of Sphaerium) inhabiting central Europe were studied karyologically, 10 of them for the first time. Analysis revealed high chromosome numbers (from 140 to 240). To elucidate the origin of high chromosome numbers, DNA contents were measured by flow cytometry in 5 of the studied species and, for comparison, in S. corneum and S. nucleus, which are known to be diploid (2n=30). Species with high chromosome counts yielded very similar DNA contents that are not higher than in the related species with low diploid numbers. This finding contradicts a possible origin of these species by recent polyploidization or hybridization of related species. Chromosome complements of the investigated species with high chromosome numbers differ from those with low 2n in their small chromosome size and the high proportion of subtelo- or acrocentric chromosomes. This indicates their possible origin either by an ancient polyplodization event followed by chromosomal rearrangements or by multiple chromosome fissions.

scholarly journals GENOME SIZE DETERMINATION OF CUCUMBER (CUCUMIS SATIVUS), HONEYDEW (CUCUMIS MELO INODORUS) AND ROCK MELON (CUCUMIS MELO CANTALUPENSIS) VIA FLOW CYTOMETRY

2021 ◽  
Vol 5 (1) ◽  
pp. 14-16
Author(s):  
Raden Muhamad Imaduddin Yumni ◽  
Mohd Fauzihan Karim ◽  
Mohd Razik Midin
Keyword(s):  
Flow Cytometry ◽  
Genome Size ◽  
Cucumis Melo ◽  
As Species ◽  
External Reference ◽  
The Family ◽  
Cucumis Species ◽  
Fcm Analysis ◽  
Interspecific And Intraspecific Variation

The family of Cucurbitaceae consists of species with economical and nutritional value. Morphologically, there are only few differences between Cucumis species. The interspecific and intraspecific variation in the genome size of the Cucumis species are not discovered yet. Due to this, this study aims to determine the genome size of C. sativus, C. melo inodorus and C. melo cantalupensis using flow cytometry (FCM) method. Nuclei suspension of selected Cucumis species were extracted using LBO1 lysis buffer by manual chopping technique and stained by propidium iodide priot to FCM analysis. Genome size of C. sativus, C. melo inodorus (Honeydew) and C. melo cantalupensis (Rockmelon) were determined by using Glycine max (Soybean) as an external reference standard (2C = 2.5 pg). This study found that the genome size of C. sativus, C. melo inodorus and C. melo cantalupensis estimated to be 2.83 pg, 3.00 pg and 3.47 pg respectively. The genome size data obtained from this study can be used in future genome studies as well as species characterization.

scholarly journals Ploidy, Relative Genome Size, and Inheritance of Spotted Foliage in Aucuba Species (Garryaceae)

HortScience ◽  
2018 ◽  
Vol 53 (9) ◽  
pp. 1271-1274
Author(s):  
Thomas G. Ranney ◽  
Tracy H. Thomasson ◽  
Kristin Neill ◽  
Nathan P. Lynch ◽  
Mark Weathington
Keyword(s):  
Flow Cytometry ◽  
Genome Size ◽  
Ploidy Level ◽  
Nuclear Gene ◽  
Discrete Groups ◽  
Basic Information ◽  
Chromosome Counts ◽  
Leaf Trait ◽  
Leaf Variegation ◽  
Evergreen Shrubs

Aucuba have been cultivated for centuries and are valued as adaptable, broad-leaved, evergreen shrubs that also can have attractive, spotted variegations on the foliage. Improved understanding of the cytogenetics and heritability of specific traits, for specific clones and cultivars, can provide basic information to help facilitate the breeding and improvement of aucuba. The objectives of this study were to determine ploidy level and relative genome size of a diverse collection of species and cultivars of aucuba using flow cytometry and cytology and to make additional observations on heritability of spotted leaf variegation. Chromosome counts were 2n = 2x = 16 for Aucuba chinensis (A. omeiensis), 2n = 4x = 32 for A. japonica ‘Rozannie’, and 2n = 6x = 48 for A. sp. ‘Hosoba’. Relative 2C genome size for the 57 taxa varied from 13.8 pg for A. obcordata to 42.0 pg for A. ‘Hosoba’ and fell within three discrete groups consistent with cytotype. Genome size for diploid taxa (A. chinensis and A. obcordata) ranged from 13.8 to 21.0 pg, tetraploids (A. himalaica var. oblanceolata, A. japonica, and A. japonica var. borealis) ranged from 28.8 to 31.2 pg, and the first-ever reported hexaploids (A. ‘Hosoba’ and A. sp. – Vietnam) ranged from 40.5 to 42.0 pg. Unlike prior reports that indicated inheritance of spotted variegations were extranuclear genes that were maternally inherited, we found that the spotted leaf trait expressed in A. japonica ‘Shilpot’ appears to be a nuclear gene that is inherited in a quantitative fashion and not strictly maternal. These data provide an enhanced foundation for breeding improved aucuba.

NEW CHROMOSOME COUNTS IN OLD WORLD GESNERIACEAE: NUMBERS FOR SPECIES HITHERTO REGARDED ASCHIRITA, AND THEIR SYSTEMATIC AND EVOLUTIONARY SIGNIFICANCE

2012 ◽  
Vol 69 (2) ◽  
pp. 323-345 ◽  
Author(s):  
F. Christie ◽  
S. Barber ◽  
M. Möller
Keyword(s):  
Chromosome Numbers ◽  
Taxonomic Revision ◽  
Basic Number ◽  
Evolutionary Significance ◽  
Chromosome Counts ◽  
Old World ◽  
Phylogenetic Studies ◽  
Cytological Data ◽  
Phylogenetic Data ◽  
Primulina Tabacum

Chromosome numbers were determined in 23 accessions representing 21 species hitherto belonging toChirita(Gesneriaceae), a genus that has recently been remodelled and split into five different genera:Damrongia,Henckelia,Liebigia,MicrochiritaandPrimulina. The previously monotypicPrimulina tabacumwas also investigated. Counts for 19 species were new, two were confirmatory and two gave different numbers from previously published counts. The results here, together with previously published cytological data for the erstwhile genusChirita, were analysed in the light of the taxonomic revision of the genus and published phylogenetic data.Chiritawas originally highly heterogeneous in chromosome numbers, including seven different somatic numbers, 2n= 8, 18, 20, 28, 32, 34 and 36. Among the five remodelled genera,Henckeliawas found to be as equally heterogeneous as the erstwhileChirita,Microchiritaincluded only two chromosome numbers, 2n= 18 and 34, the three species ofDamrongiawere uniform with 2n= 18, while species belonging to the extendedPrimulinashowed only one basic number,x= 18, with 15 samples being diploid, and one being tetraploid. In the light of recent phylogenetic studies, polyploid as well as dysploid changes appear to have shaped the genomes of the newly defined generaHenckelia,Microchiritaand, to a lesser degree,Primulina.

scholarly journals Notes on Potentilla (Rosaceae) of Altai. 8. A new species with a disjunctive area for the flora of Kazakhstan

Turczaninowia ◽  
2021 ◽  
Vol 24 (2) ◽  
pp. 144-155
Author(s):  
Aleksey A. Kechaykin ◽  
Norbert Bauer ◽  
Michail V. Skaptsov ◽  
Alexander I. Shmakov
Keyword(s):  
Flow Cytometry ◽  
New Species ◽  
Genome Size ◽  
Morphological Characters ◽  
Altai Mountain ◽  
Southwestern Part ◽  
New Finding ◽  
First Time ◽  
A New Species ◽  
Mountain Country

For the first time, the Potentilla laciniosa is reported for the flora of Kazakhstan and Altai Mountain Country with the exact location. After a large disjunction of the range, the species was found in the Kyzylbeltau mountains of the Urdzhar region in the southwestern part of the Tarbagatai ridge. Some morphological characters of the new finding are discussed in comparison with closely related taxa and data on the genome size obtained for the first time from seeds using the method of flow cytometry. The lectotypification of Potentilla laciniosa is carried out on the basis on the investigated herbarium material and literature sources.

scholarly journals Check-list of chromosome numbers of the family Hygromiidae (Gastropoda: Stylommatophora) with new data on Circassina frutis

2021 ◽  
Vol 64 (2) ◽  
pp. 7-20
Author(s):  
Nana Bakhtadze ◽  
Nino Gabroshvili ◽  
Levan Mumladze ◽  
Nino Gabroshvili
Keyword(s):  
Chromosome Number ◽  
Chromosome Numbers ◽  
Land Snail ◽  
Haploid Number ◽  
Check List ◽  
Fundamental Number ◽  
Diploid Complement ◽  
The Family ◽  
Karyotype Formula ◽  
First Time

Chromosome number data on the Hygromiidae (Gastropoda: Stylommatophora) are summarized and reviewed briefly in the context of the phylogeny of the family. In hygromiids, the haploid chromosome numbers range from 21 to 26. It is supposed that n = 21 is the ancestral chromosome number in the family. The modal haploid number for Hygromiidae is 23. Description of karyotype in terms of chromosome number and morphology of hygromiid land snail Circassina frutis is provided for the first time. The diploid chromosome number of this species is 2n = 46. The karyotype is symmetric and consists of 21 pairs of metacentric and 2 pairs of submetacentric chromosomes. The karyotype formula is as follows: 2n = 42m + 4sm (n = 21m + 2sm). The fundamental number (FN) is 92. Chromosomes range in length from 2.53 μm for the smallest pair to 6.00 μm for the largest pair. The total length of chromosomes in diploid complement (TCL) is 170.40 ± 3.22 μm.

scholarly journals Genome size variation and karyotype diversity in eight taxa of Sorbus sensu stricto (Rosaceae) from China

2021 ◽  
Vol 15 (2) ◽  
pp. 137-148
Author(s):  
Jiabao Li ◽  
Kailin Zhu ◽  
Qin Wang ◽  
Xin Chen
Keyword(s):  
Flow Cytometry ◽  
Genome Size ◽  
Size Variation ◽  
Sensu Stricto ◽  
Chromosome Size ◽  
Chromosome Counting ◽  
Genome Size Variation ◽  
Ploidy Levels ◽  
First Time ◽  
Karyotype Symmetry

Eight taxa of Sorbus Linnaeus, 1753 sensu stricto (Rosaceae) from China have been studied karyologically through chromosome counting, chromosomal measurement and karyotype symmetry. Genome size was also estimated by flow cytometry. Six taxa, S. amabilis Cheng ex T.T.Yu et K.C.Kuan, 1963, S. hupehensis var. paucijuga (D.K. Zang et P.C. Huang, 1992) L.T. Lu, 2000, S. koehneana C.K. Schneider, 1906, S. pohuashanensis (Hance, 1875) Hedlund, 1901, S. scalaris Koehne, 1913 and S. wilsoniana C.K. Schneider, 1906 are diploids with 2n = 34, whereas two taxa, S. filipes Handel-Mazzetti,1933 and S. ovalis McAllister, 2005 are tetraploid with 2n = 68. In general, the chromosome size is mainly small, and karyotypes are symmetrical with predominance of metacentric chromosomes. Genome size variation of diploids and tetraploids is 1.401 pg –1.676 pg and 2.674 pg –2.684 pg, respectively. Chromosome numbers of S. amabilis and S. hupehensis var. paucijuga, and karyotype and genome size of eight taxa studied are reported for the first time. This study emphasised the reliability of flow cytometry in genome size determination to infer ploidy levels in Chinese native Sorbus species.

New chromosome numbers in Homoranthus (Myrtaceae: Chamelaucieae) and notes on their taxonomic utility

2008 ◽  
Vol 21 (6) ◽  
pp. 443 ◽  
Author(s):  
Lachlan M. Copeland ◽  
Jeremy J. Bruhl ◽  
Lyn A. Craven ◽  
Curt L. Brubaker
Keyword(s):  
Chromosome Numbers ◽  
Phylogenetic Relationships ◽  
Chromosome Counts ◽  
First Time

Diploid chromosome counts are reported for the first time for 23 species of Homoranthus (Myrtaceae) and published counts are confirmed for a further three species. H. wilhelmii (F.Muell.) Cheel was determined as having 2n = 14, which contrasts with an earlier report of n = 6 for the species. Dysploidy appears to be common within the genus, with diploid chromosome numbers of 2n = 14, 16, 18 and 20 being recorded. There was no evidence of recent polyploidy within Homoranthus nor of any infraspecific dysploidy. Chromosome numbers appear to be a useful taxonomic tool to confirm the distinctness of some morphologically similar taxa but may be of limited use in estimating phylogenetic relationships.

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