scholarly journals Clustered Grid Cell Data Structure for Isosurface Rendering

2020 ◽  
Vol 28 (1-2) ◽  
pp. 9-17
Author(s):  
Fredrik Nysjö
2016 ◽  
Vol 115 (2) ◽  
pp. 992-1002 ◽  
Author(s):  
Z. Navratilova ◽  
K. B. Godfrey ◽  
B. L. McNaughton

Neural recording technology is improving rapidly, allowing for the detection of spikes from hundreds of cells simultaneously. The limiting step in multielectrode electrophysiology continues to be single cell isolation. However, this step is crucial to the interpretation of data from putative single neurons. We present here, in simulation, an illustration of possibly erroneous conclusions that may be reached when poorly isolated single cell data are analyzed. Grid cells are neurons recorded in rodents, and bats, that spike in equally spaced locations in a hexagonal pattern. One theory states that grid firing patterns arise from a combination of band firing patterns. However, we show here that summing the grid firing patterns of two poorly resolved neurons can result in spurious band-like patterns. Thus, evidence of neurons spiking in band patterns must undergo extreme scrutiny before it is accepted. Toward this aim, we discuss single cell isolation methods and metrics.


2018 ◽  
Vol 9 (2) ◽  
pp. 1
Author(s):  
Gigih Fitrianto ◽  
Shojiro Tanaka ◽  
Ryuei Nishii

The advantage of using grid-cell data for socio-economic analysis should be the feasibility to incorporate satellite data that will enrich the regional analysis and has an important role to observe the relationship between socio-economics and nature. This advancement corresponds to the sustainable development goals that balance the socio-economic quality in harmony. In order to perform the analysis, formulation of a spatial adjacency matrix has an important role to project the spatial relationship within regions. However, no precedent research provided a practical formulation for the spatial adjacency matrix in grid-cell data structure (Fitrianto & Tanaka, 2017).The general process that used shapefiles solely, which store geometry and attribute information for the spatial features (ESRI, 1998) to construct the adjacency matrix is not suitable. The problem arises due to the existence of NA cells that represent non-inhabitant areas such as water bodies, yet the shapefile does not contain this information inside the municipal body. The NA cells create a non-rectangular lattice and it is important to exclude them in the analysis to correctly project the real information.This article provides a method to precisely project the real information by using Kronecker product to construct the adjacency matrix and applying a projection matrix to eliminate the NA cells (Tanaka & Nishii, 2009). It showed eminent efficiency compared with commonly used R package called spdep. Experimental results verified that this method, even for huge dimension with a trillion elements, produces more than 2000 times faster elapsed time than the package.


2013 ◽  
Vol 864-867 ◽  
pp. 2799-2803
Author(s):  
Wei Li ◽  
Wen Yi Fan ◽  
Xue Gang Mao ◽  
Lin Zhao

Uses 2011 years TM/ETM images classification were land uses/cover type figure, combination Great Khinggan area digital elevation model (DEM), and soil type distribution figure and research regional rainfall information, we got all factors values of space distribution in the USLE model, got soil erosion volume estimates data and soil erosion strength distribution figure based on grid cell data. Result indicate that the micro-absolute percentage of erosion throughout the study area, with increasing slope, area of erosion and erosion gradually reduce trend increases with the elevation increases, reduced erosion area after, generally good soil and water conservation in the region.


2020 ◽  
Vol 32 (2) ◽  
pp. 330-394
Author(s):  
Nicolai Waniek

Although hippocampal grid cells are thought to be crucial for spatial navigation, their computational purpose remains disputed. Recently, they were proposed to represent spatial transitions and convey this knowledge downstream to place cells. However, a single scale of transitions is insufficient to plan long goal-directed sequences in behaviorally acceptable time. Here, a scale-space data structure is suggested to optimally accelerate retrievals from transition systems, called transition scale-space (TSS). Remaining exclusively on an algorithmic level, the scale increment is proved to be ideally [Formula: see text] for biologically plausible receptive fields. It is then argued that temporal buffering is necessary to learn the scale-space online. Next, two modes for retrieval of sequences from the TSS are presented: top down and bottom up. The two modes are evaluated in symbolic simulations (i.e., without biologically plausible spiking neurons). Additionally, a TSS is used for short-cut discovery in a simulated Morris water maze. Finally, the results are discussed in depth with respect to biological plausibility, and several testable predictions are derived. Moreover, relations to other grid cell models, multiresolution path planning, and scale-space theory are highlighted. Summarized, reward-free transition encoding is shown here, in a theoretical model, to be compatible with the observed discretization along the dorso-ventral axis of the medial entorhinal cortex. Because the theoretical model generalizes beyond navigation, the TSS is suggested to be a general-purpose cortical data structure for fast retrieval of sequences and relational knowledge. Source code for all simulations presented in this paper can be found at https://github.com/rochus/transitionscalespace .


2019 ◽  
Vol 1 ◽  
pp. 1-1
Author(s):  
Takehiro Morimoto

<p><strong>Abstract.</strong> Visualization and geospatial analyses of rural areas at a sub-regional scale is important for examining rural areas and analyzing their spatial characteristics and their relationships between geographical conditions in detail. However, those types of researches have been scarce. The most important reason for this is a low correspondence between the territories of sub-regional statistical units in the population census, the agriculture census, and other numerical data of geographical conditions. One way to solve this problem is to use grid cell data, but the grid cell statistics of the agricultural census had not been made after 1980 agricultural census. After 35 years of blanks, the kind of statistics was finally created based on the 2015 agricultural census and published in 2018. This grid cell statistics of 2015 agricultural census covers only human aspects of agricultural management.</p><p>In this research, the author examined the availability of grid cell data of the agricultural census for visualization and geospatial analyses of rural areas. Firstly, the author composed grid cell data by allocating agricultural settlement data to grid cells based on grid cell data of land use information. Regional variations of agricultural land use and their changes were visualized better than the case based on agricultural settlement data. Then quantitative analyses on their regional distribution and relationships between geographical and social factors were conducted. Influences of elevation, slope and population density on land use were clarified. Secondly, the author used the 2015 grid cell data for mapping, spatial analyses and examining the relationship between geographical and social factors. It was confirmed that the distribution of human aspects of agricultural management was potentially related to urban expansion.</p><p>These findings show a significant potential of grid cell statistics for visualization and geospatial analyses of rural areas.</p>


2011 ◽  
Vol 12 (S1) ◽  
Author(s):  
Eric T Reifenstein ◽  
Martin B Stemmler ◽  
Andreas VM Herz ◽  
Susanne Schreiber
Keyword(s):  

2021 ◽  
Author(s):  
Mikail Khona ◽  
Sarthak Chandra ◽  
Ila Fiete

Modular structures in the brain play a central role in compositionality and intelligence, however the general mechanisms driving module emergence have remained elusive. Studying entorhinal grid cells as paradigmatic examples of modular architecture and function, we demonstrate the spontaneous emergence of a small number of discrete spatial and functional modules from an interplay between continuously varying lateral interactions generated by smooth cortical gradients. We derive a comprehensive analytic theory of modularization, revealing that the process is highly generic with its robustness deriving from topological origins. The theory generates universal predictions for the sequence of grid period ratios, furnishing the most accurate explanation of grid cell data to date. Altogether, this work reveals novel principles by which simple bottom-up dynamical interactions lead to macroscopic modular organization.


2020 ◽  
Vol 11 ◽  
Author(s):  
Abubakar S Ringim

This paper describes progress with the atlas of birds of Nigeria, from 7 March 2012 to 15 December 2019. The database of the project contained 658 records of 246 species submitted to the BirdPix section of the Virtual Museum. The BirdPix section of the Virtual Museum was launched in 2012 and is a supplementary data capture project for the African Bird Atlas. Over this period, for Nigeria, twelve citizen scientists contributed records to BirdPix. The most frequently recorded species were Laughing Dove Streptopelia senegalensis (769 records across its range,  with 12in Nigeria, from 12 grid cells), and Northern Red Bishop Euplectes franciscanus (30 records across the range, and recorded in 11 grid cells in Nigeria). At least two photographs of species range extensions had been submitted. This paper highlights the role of citizen science in biodiversity conservation and provides up-to-date information on the species distribution maps and lists of bird species recorded in the grid cells. Without a doubt, the BirdPix database will only be comprehensive if it contains the entire knowledge base of the species occurring within each grid cell. Data generated in the BirdPix project can be used for monitoring and modelling changes in species distributions over time. Increased awareness of the concept of citizen science and increased volunteer recruitment should be top priorities.  


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