Determination of mosquito Larvicidal potential of Bacillus thuringiensis Cry11Ba fusion protein through molecular docking

Biologia ◽  
2018 ◽  
Vol 73 (10) ◽  
pp. 1015-1023
Author(s):  
Rabbia Pervaiz ◽  
Mohsin Ahmad Khan ◽  
Nadeem Ahmed ◽  
Hafsa Naeem ◽  
Ahmad Usman Zafar
2015 ◽  
Vol 6 ◽  
Author(s):  
Aftab Ahmad ◽  
Muhammad R. Javed ◽  
Abdul Q. Rao ◽  
Muhammad A. U. Khan ◽  
Ammara Ahad ◽  
...  

2021 ◽  
Vol 67 (3) ◽  
pp. 251-258
Author(s):  
A.E. Kniga ◽  
I.V. Polyakov ◽  
A.V. Nemukhin

Effective personalized immunotherapies of the future will need to capture not only the peculiarities of the patient’s tumor but also of his immune response to it. In this study, using results of in vitro high-throughput specificity assays, and combining comparative models of pMHCs and TCRs using molecular docking, we have constructed all-atom models for the putative complexes of all their possible pairwise TCR-pMHC combinations. For the models obtained we have calculated a dataset of physics-based scores and have trained binary classifiers that perform better compared to their solely sequence-based counterparts. These structure-based classifiers pinpoint the most prominent energetic terms and structural features characterizing the type of protein-protein interactions that underlies the immune recognition of tumors by T cells.


PLoS ONE ◽  
2011 ◽  
Vol 6 (1) ◽  
pp. e16025 ◽  
Author(s):  
Chunying Zhong ◽  
Donghai Peng ◽  
Weixing Ye ◽  
Lujun Chai ◽  
Junliang Qi ◽  
...  

2013 ◽  
Vol 112 (2) ◽  
pp. 142-145 ◽  
Author(s):  
Dalel BenFarhat-Touzri ◽  
Marwa Saadaoui ◽  
Lobna Abdelkefi-Mesrati ◽  
Imen Saadaoui ◽  
Hichem Azzouz ◽  
...  

1987 ◽  
Vol 114 (2) ◽  
pp. R1-R4 ◽  
Author(s):  
R.G. Forage ◽  
R.W. Brown ◽  
K.J. Oliver ◽  
B.T. Atrache ◽  
P.L. Devine ◽  
...  

ABSTRACT Seven Merino–Border Leicester cross–bred ewes were immunized with a purified fusion protein, produced by recombinant DNA methods, of the a subunit of bovine inhibin. Four animals were immunized with the fusion protein alone and three with a conjugate made by coupling the fusion protein to keyhole limpet haemocyanin (KLH) using glutaraldehyde. Each animal received four injections of the fusion protein over 93 days. The animals were synchronized using progestagen sponges and subjected to laparoscopy for the determination of ovulation rates in two consecutive cycles (days 115 and 135). The immunized animals had overall mean ovulation rates for each cycle of 3.4 and 3.4 which was significantly (P < 0.001) above the rates of 1.1 and 1.4 determined for the controls, which had either received no treatment (n=5) or had been immunized with 300 μg KLH (n=4). Analysis of antisera taken on day 115 showed significant fusion protein antibodies and iodinated inhibin–binding capacity in the test but not control groups. Furthermore, antisera to the fusion protein in four out of seven ewes neutralized the inhibin bioactivity of ovine follicular fluid in an in–vitro bioassay. These data demonstrate that neutralization of inhibin can be effected by immunization with bovine inhibin a subunit and that such immunization results in increased ovulation rates as predicted from the biological role of inhibin as a suppressor of FSH.


1983 ◽  
Vol 42 (3) ◽  
pp. 344-347 ◽  
Author(s):  
Svetlana N. Bubenschikova ◽  
Vera K. Kagramanova ◽  
Ludmila A. Baratova ◽  
Elvira B. Danilova ◽  
Elena B. Kruglyak

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