scholarly journals Pengelompokan Klon-Klon Ubi Jalar Berdasarkan Analisis Gerombol, Komponen Utama dan Biplot dari Karakter Morfologi

2019 ◽  
Vol 46 (3) ◽  
pp. 276-282
Author(s):  
Helen Hetharie ◽  
Simon Hadi Teguh Raharjo ◽  
Dan Edizon Jambormias
Keyword(s):  
Principal Component Analysis ◽  
Sweet Potato ◽  
Ipomoea Batatas ◽  
Principal Component ◽  
Component Analysis ◽  
Morphological Characters ◽  
Similarity Coefficients ◽  
Biplot Analysis ◽  
Tuber Flesh ◽  
Descriptive Method

Sweet potato is a food crop with high genetic and phenotypic diversities. The objective of this study was to cluster sweet potato clones based on their morphological characters. This research used descriptive method using 25 morphological characters on 28 sweet potato clones and clustered using dice coefficient, principal component analysis and biplot analysis. The results showed that the clones were grouped into two clusters and 14 sub-clusters. Three sub-clusters had high similarity coefficients, i.e., 0.68-0.96, one clone was eliminated, and 11 sub-clusters had a low similarity, i.e., 0.41-0.52. The principal component analysis showed 14 of 25 morphological characters  determined the diversity in 27 sweet potato clones with cumulative variance of 70.79%. Biplot analysis showed that 12 characters contributed to cumulative variance of 61.3%. Twelve morphological characters had weak contribution on the characteristics of the clones in quadrant I; meanwhile, characteristics of  clones in quadrant II were orange, yellow and white tuber flesh, in quadrant III was dark purple tuber flesh, and in quadrant IV were purple tuber flesh and cortex. Result of the grouping analysis identified clones that were closely related and those distantly related for improvement purposes.Keywords: Ipomoea batatas, cumulative variance, Maluku province, morphology, relationship

scholarly journals Morphological Variability and Storage Root Productivity of Some Sweet Potato (Ipomoea Batatas (L.) Lam) Genotypes in An Ultisol

2021 ◽  
Vol 2 (6) ◽  
Author(s):  
Gamaliel I. Harry ◽  
Joseph I. Ulasi
Keyword(s):  
Principal Component Analysis ◽  
Sweet Potato ◽  
Ipomoea Batatas ◽  
Principal Component ◽  
Component Analysis ◽  
The Other ◽  
Storage Root ◽  
Root Yield ◽  
Cropping Seasons ◽  
And Storage

Ten sweet potato (Ipomoea batatas (L.) Lam) genotypes sourced from National Root Crops Research Institute, Umudike were evaluated under rainfed condition in 2020 and 2021 cropping seasons at the Teaching and Research Farm of the University of Uyo, Uyo, Akwa Ibom State to ascertain variability among ten sweet potato genotypes and identify traits which are positively and significantly associated with yield and also identify genotypes with high yield potential for cultivation on an ultisol of Akwa Ibom State, Nigeria. The ten genotypes: TIS87/0087, Naspoy-12, Umuspo-4, Umuspo-1, Naspoy-11, Lourdes, Erica, Delvia, Ex-Igbariam and Umuspo-3 were used as treatments and the experiment was laid out in a randomized complete block design with three replications. Data collected were subjected to analysis of variance, correlation and principal component analysis. The genotype differs significantly (P≤ 0.05) for number of marketable roots, weight of marketable roots and fresh roots yield. UMUSPO-3 was superior over all the other genotypes for the following character; number of marketable roots, weight of marketable root yield and fresh root yield. Umuspo-3 produced the highest storage root yield (28.78t/ha, 27.09t/ha) in 2020 and 2021 cropping seasons, respectively. The result of the correlation analysis also revealed that vine length, number of marketable roots, weight of marketable were highly significantly and positively (P<0.01) correlated with fresh root yield. Principal component analysis (PCA) had four main principal components explaining 81.55% of the total variation with number of marketable roots, weight of marketable tuber and storage root yield contributing the most to the first PCA. Umuspo-3 outperformed the other nine sweet potato genotypes in yield and yield related characters. Therefore, Umuspo-3 been a high yielding genotype adaptable to Uyo agro-ecology, could be recommended to sweet potato growers for fresh storage root production.

scholarly journals DIVERSITAS GENETIK KERABAT LIAR UBI JALAR IPOMOEA TRIFIDA (H.B.K.) G.DON. BERUMBI ASAL CITATAH JAWA BARAT BERDASARKAN KARAKTER KROMOSOM (Genetic Diversity Of Wild Relative Of Sweet Potato Tubered-Ipomoea Trifida (H.B.K.) G.don. Originated From Citatah West Java Based On Chromosome Characters)

2013 ◽  
Vol 3 (3) ◽  
Author(s):  
Tia Setiawati
Keyword(s):  
Genetic Diversity ◽  
Principal Component Analysis ◽  
Sweet Potato ◽  
Ipomoea Batatas ◽  
Principal Component ◽  
Component Analysis ◽  
West Java ◽  
Ipomoea Trifida ◽  
Plant Materials ◽  
Materials Used

AbstrakKerabat liar ubi jalar Ipomoea trifida asal Citatah Jawa Barat potensial digunakan dalam program pemuliaan tanaman ubi jalar (Ipomoea batatas (L.) Lam.) Untuk mengetahui diversitas genetik I. trifida  dilakukan pengamatan terhadap karakter kromosom. Bahan tanaman yang digunakan  adalah 10 spesies I. trifida berumbi. Hubungan kekerabatan antar spesies diketahui melalui analisis klaster dan Analisis Komponen Utama/Principal Component Analysis (PCA). Hasil pengamatan menunjukkan pengujian pada 10 aksesi I. trifida berumbi dengan menggunakan 9 karakter kromosom menghasilkan jarak ketidakmiripan (Euclidean coeffisien) yang berkisar 1,75 – 6,22 dan menunjukkan diversitas yang luas. Dendogram yang dihasilkan pada jarak ketidakmiripan 5,23 menunjukkan terbentuknya 3 klaster utama. Analisis Komponen Utama (PCA) menghasilkan 2 komponen utama pertama (PC1 dan PC2) yang telah dapat menjelaskan 89,64% dari total variasi. Kata kunci : Ipomoea trifida, Analisis Klaster, Analisis Komponen UtamaAbstractWild relatives of sweet potato, Ipomoea trifida originated from Citatah West Java was potential use in plant breeding programs of Ipomoea batatas (L.) Lam. To determine the genetic diversity of I. trifida, observation on characters of chromosomes of I.trifida was conducted. Plant materials used ten accessions  of tubered-I. trifida. Relationship between species identified by cluster analysis and Principal Component Analysis (PCA). The results showed that the observation on the 10 accession of tubered-I. trifida using 9 characters chromosome produces dissimilarities distance (Euclidean coefficient) ranging from 1.75 to 6.22. Dendogram generated  at a dissimilarity distance of 5.23 showed the formation of three main clusters. Principal Component Analysis (PCA) produced first two principal component (PC1 and PC2), which has been able to explain 89.64% of the total variation.Keyword  : Ipomoea trifida, Clustering Analysis, Principal Component Analysis

scholarly journals A phenetic study of the genus Rasahus Amyot & Serville (Heteroptera, Reduviidae)

1990 ◽  
Vol 1 (3) ◽  
pp. 131-144
Author(s):  
María Coscarón
Keyword(s):  
Principal Component Analysis ◽  
Cluster Analysis ◽  
Principal Component ◽  
Component Analysis ◽  
Morphological Characters ◽  
Basal Plate ◽  
Using Data ◽  
Diagnostic Importance

Cluster analysis by four methods and a principal component analysis were performed using data on 24 morphological characters of 27 species of the genus Rasahus (Peiratinae). The results obtained by the different techniques show general agreement. They confirm the present number of taxa and reveal the existence within the genus of three groups of species: scutellaris , hamatus and vittatus. The scutellaris group is constituted by R. aeneus (Walker), R. maculipennis (Lepelletier and Serville), R. bifurcatas Champion, R. castaneus Coscarón, R. guttatipennis (Stål), R. flavovittarus Stål, R. costarricensis Coscarón, R. scutellaris (Fabricius), R. atratus Coscarón, R. peruensis Coscarón, R. paraguayensis Coscarón, R. surinamensis Coscarón, R. albomaculatus Mayr, R. brasiliensis Coscarón and R. sulcicollis (Serville).The hamatus group contains R. rufiventris (Walker), R. hamatus (Fabricius), R. amapaensis Coscarón, R. arcitenens Stål, R. limai Pinto, R. angulatus coscarón, R. thoracicus Stål, R. biguttatus (Say), R. arcuiger (Stål), R. argentinensis Coscarón and R. grandis Fallou. The vittatus group contains R. vittatus Coscarón. The characters used to separate the groups of species are: shape of the pygophore, shape of the parameres, basal plate complexity, shape of the postocular region and hemelytra pattern. Illustrations of the structures of major diagnostic importance are included.

scholarly journals Morphological variability of acorns and its taxonomic significance in Quercus. from Turkey

2015 ◽  
Vol 43 (3) ◽  
pp. 293-299 ◽  
Author(s):  
Y Bakis ◽  
MT Babaç
Keyword(s):  
Principal Component Analysis ◽  
Morphological Variability ◽  
Morphological Characteristics ◽  
Principal Component ◽  
Component Analysis ◽  
Morphological Characters ◽  
Taxonomic Significance ◽  
Morphological Variations ◽  
Quercus Species ◽  
Different Populations

Morphological variations of acorn among and within the groups of Quercus species were studied. A total of 617 acorns belonging to 14 species representing all 3 sections of Quercus L. (Fagaceae) in Turkey were examined in this study. Specimens were collected from 47 different populations over both Anatolian and Thrace part of Turkey. Principal component analysis was used to analyze the morphological characteristics of acorns. Results obtained from this study demonstrate the use of morphological characters in differentiating the taxa of Quercus and Cerris sections studied. Another important finding is the introgression among the acorns of species within Quercus section DOI: http://dx.doi.org/10.3329/bjb.v43i3.21601 Bangladesh J. Bot. 43(3): 293-299, 2014 (December)

Taxonomic revision of the Colombian Tityus (Archaeotityus) (Scorpiones, Buthidae) species: a morphological and morphometric approach, with a description of a new species

Zootaxa ◽  
2019 ◽  
Vol 4660 (1) ◽  
pp. 1-94
Author(s):  
JAIRO A. MORENO-GONZÁLEZ ◽  
RANULFO GONZÁLEZ O. ◽  
EDUARDO FLÓREZ D.
Keyword(s):  
Principal Component Analysis ◽  
New Species ◽  
New Records ◽  
Principal Component ◽  
Taxonomic Revision ◽  
Component Analysis ◽  
Morphological Characters ◽  
Species Level ◽  
Qualitative And Quantitative ◽  
A New Species

We present a taxonomic revision of the Colombian Tityus (Archaeotityus) species based on morphological and morphometric evidence. We examined more than 385 specimens and evaluated new and previously used qualitative and quantitative morphological characters. We redescribe the Colombian species and present morphological characters for both sexes and an emended diagnosis for the subgenus Tityus (Archaeotityus). We describe a new species Tityus guane sp. nov. from Santander department, Colombia, Tityus betschi Lourenço 1992 is synonymized with Tityus parvulus Kraepelin, 1914, and Tityus wayuu Rojas-Runjaic & Armas, 2007 is synonymized with Tityus tayrona Lourenço, 1991. We measured 186 specimens and performed a multivariate principal component analysis (PCA) for 34 selected morphometric ratios for each sex. We found that a few morphological ratios support species level distinctions within the Colombian species. We provide updated distributional maps with new records and an identification key for both sexes. Furthermore, we provide an updated checklist for the subgenus and a discussion about the character systems used within Tityus (Archaeotityus). The new morphological characters proposed and the traditional morphometry examined with a PCA are useful for studying Tityus (Archaeotityus) taxonomy.

scholarly journals Evaluation of morphometric characters of honeybee (Apis mellifera L.) populations in Nigeria

2016 ◽  
Author(s):  
Usman H Dukku
Keyword(s):  
Principal Component Analysis ◽  
Body Size ◽  
Apis Mellifera ◽  
Analysis Of Variance ◽  
Principal Component ◽  
Component Analysis ◽  
Morphological Characters ◽  
Morphometric Characters ◽  
Sub Saharan

Samples of workers of honeybee were collected from 41 colonies in nine localities in Nigeria and analysed using classical morphometry. Measurements of 35 morphological characters of body size, colour and pilosity were taken from 10 workers per colony and the data subjected to one-way analysis of variance (ANOVA) and principal component analysis. Although ANOVA revealed a considerable variation of morphological characters between the sampled localities, principal component analysis indicated that this variation was not sufficient to group the colonies under investigation into geographically separable groups. Based on the agreement between the results of this study and those of previous studies, it is concluded that the honeybees of this area are morphometrically pure populations of sub-Saharan A. mellifera.

scholarly journals Rhamnella brachycarpa (Rhamnaceae), a new species from Hainan Island, China

PhytoKeys ◽  
2019 ◽  
Vol 132 ◽  
pp. 19-29
Author(s):  
Zhiqiang Lu ◽  
Yongshuai Sun
Keyword(s):  
Principal Component Analysis ◽  
New Species ◽  
Principal Component ◽  
Woody Species ◽  
Hainan Island ◽  
Component Analysis ◽  
Morphological Characters ◽  
The Other ◽  
A New Species

Rhamnella brachycarpa Z. Qiang Lu &amp; Y. Shuai Sun, a new evergreen woody species from Hainan Island, is described and illustrated. The specimens of this new species have previously been identified and placed under R. rubrinervis (H. Lév.) Rehder, with which it shares evergreen leaves, erect and climbing habits and axillary flowering branches with bracteole leaves. However, the specimens from three distinct Hainan populations significantly differ from those of R. rubrinervis from other regions with smaller length to width ratios of leaves, fruit and seeds, smaller sizes of fruit and seeds and mucronate seed apices. Principal Component Analysis of the closely related taxa, based on multiple morphological characters, further recognised two separated groups. One of them comprises R. tonkinensis and R. rubrinervis, the other merely includes all individuals from these distinct Hainan populations. Therefore, R. brachycarpa, based on these distinct Hainan populations, is here erected as a new species, distinctly different from its published relatives.

scholarly journals Agronomic Performance and Organoleptic Characteristics of Local Varieties of Sweet Potato (Ipomea batatas) Cultivated in Mbaiki (Central African Republic)

2021 ◽  
pp. 1-11
Author(s):  
Gorgon Igor Touckia ◽  
Lucie Aba-toumnou ◽  
Ephrem Kosh Komba ◽  
Cherubin Dan-zi ◽  
Kouami Kokou
Keyword(s):  
Principal Component Analysis ◽  
Sweet Potato ◽  
Central African Republic ◽  
Principal Component ◽  
Component Analysis ◽  
Growth And Yield ◽  
P Value ◽  
Local Varieties ◽  
Organoleptic Characteristics ◽  
Significant Difference

In the Central African Republic, there are a multitude of local varieties of sweet potato. However, few studies have been carried their agro morphological and organoleptic characteristics. A Fisher random block device was set up on the three local varieties of sweet potato. The growing and production parameters were evaluated as well as the organoleptic characteristics through the food taste test. The parameters of growing and production were assessed by means of analysis of variance (ANOVA) with one classification criterion using the R software version 3.1.3. A Principal Component Analysis (PCA) was also performed with the growth and yield parameters in order to highlight the correlations between these different parameters. The variety 1 (V1) produced the plants with the largest diameters (1.30 cm), while the smallest diameters was observed in the variety 2 (V2) with 0.55 cm. There is a significant difference (P-value = 0.0001) between the different varieties according to the ANOVA test. According to the length of the tuber, the V2 produced the longest tuberous root than the others with an average of 28.53 cm. The smallest length is observed in the V3 with an average of 25.12 cm. There is not significant (p-value = 0.216) in relation with the length of the tuber for the cultivated varieties of the sweet potato. The eigenvalues of the two main axes extracted from the Principal Component Analysis explained 53.68% and 16.82% of the matrix growth/ yield information. Along the factor axes, apart from parameters such as tuber diameters and length which are not positively correlated, there is little variability between the other parameters which are strongly correlated.

scholarly journals Evaluation of morphometric characters of honeybee (Apis mellifera L.) populations in Nigeria

2016 ◽  
Author(s):  
Usman H Dukku
Keyword(s):  
Principal Component Analysis ◽  
Body Size ◽  
Apis Mellifera ◽  
Analysis Of Variance ◽  
Principal Component ◽  
Component Analysis ◽  
Morphological Characters ◽  
Morphometric Characters ◽  
Sub Saharan

Samples of workers of honeybee were collected from 41 colonies in nine localities in Nigeria and analysed using classical morphometry. Measurements of 35 morphological characters of body size, colour and pilosity were taken from 10 workers per colony and the data subjected to one-way analysis of variance (ANOVA) and principal component analysis. Although ANOVA revealed a considerable variation of morphological characters between the sampled localities, principal component analysis indicated that this variation was not sufficient to group the colonies under investigation into geographically separable groups. Based on the agreement between the results of this study and those of previous studies, it is concluded that the honeybees of this area are morphometrically pure populations of sub-Saharan A. mellifera.

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