A Theoretical Study of the Lubricating Abilities of 2D Layered Hydrogen Bonded Systems

Author(s):  
Chloe Graham

It has been estimated that 100 million terajoules of energy is used every year to combat friction. For perspective, this corresponds to one fifth of the world’s total energy expenditure. This significant amount leaves plenty of room for improvement. To reduce the environmental and financial impact of friction, lubricants are usually placed in mechanical systems and act as a barrier between moving parts. Lubricants come in many forms but they all have low energy slip mechanisms and resistance to conformational change under pressure. Chemicals with these properties can be predicted through some educated guesswork and computational simulations. Its advantageous to look at novel lubricants computationally because each small reaction can be analyzed, whereas in the lab it may be difficult to see the molecular mechanisms taking place in such short time spans. Additionally, computation is more environmentally friendly than hands-on testing because no chemicals are used. My research studies compounds found in nature and assesses their potential for use as lubricants. The focus of my studies has been on layered systems of melamine molecules that self-assemble into two-dimensional structures through hydrogen bonding. The layered nature of this system is similar to that of graphite – an effective layered lubricant; however, the reversibility of self-assembly may allow the layered structure to reform when disrupted during sliding to increase the robustness of the system. In this presentation, I will discuss the results of my simulations, with an emphasis on the structure of the system, the slip mechanism, slip energetics and friction forces.

2016 ◽  
Vol 40 (12) ◽  
pp. 10116-10126 ◽  
Author(s):  
Ghodrat Mahmoudi ◽  
Farhad Akbari Afkhami ◽  
Himanshu Sekhar Jena ◽  
Parisa Nematollahi ◽  
Mehdi D. Esrafili ◽  
...  

Self-assembly of Zn(ii) compounds is influenced by a counter ion and non-covalent interactions.


Catalysts ◽  
2020 ◽  
Vol 10 (9) ◽  
pp. 1079
Author(s):  
Zhishan Su ◽  
Changwei Hu ◽  
Nasir Shahzad ◽  
Chan Kyung Kim

The reaction mechanism and origin of asymmetric induction for conjugate addition of cyanide to the C=C bond of olefin were investigated at the B3LYP-D3(BJ)/6-31+G**//B3LYP-D3(BJ)/6-31G**(SMD, toluene) theoretical level. The release of HCN from the reaction of ethyl cyanoformate (CNCOOEt) and isopropanol (HOiPr) was catalyzed by cinchona alkaloid catalyst. The cyanation reaction of olefin proceeded through a two-step mechanism, in which the C-C bond construction was followed by H-transfer to generate a cyanide adduct. For non-catalytic reaction, the activation barrier for the rate-determining C-H bond construction step was 34.2 kcal mol−1, via a four-membered transition state. The self-assembly Ti(IV)-catalyst from tetraisopropyl titanate, (R)-3,3′-disubstituted biphenol, and cinchonidine accelerated the addition of cyanide to the C=C double bond by a dual activation process, in which titanium cation acted as a Lewis acid to activate the olefin and HNC was orientated by hydrogen bonding. The steric repulsion between the 9-phenanthryl at the 3,3′-position in the biphenol ligand and the Ph group in olefin raised the Pauli energy (ΔE≠Pauli) of reacting fragments at the re-face attack transition state, leading to the predominant R-product.


Langmuir ◽  
2008 ◽  
Vol 24 (17) ◽  
pp. 9566-9574 ◽  
Author(s):  
Mathieu Linares ◽  
Patrizia Iavicoli ◽  
Krystallia Psychogyiopoulou ◽  
David Beljonne ◽  
Steven De Feyter ◽  
...  

Author(s):  
T. S. Creasy ◽  
J. C. Grunlan ◽  
R. B. Griffin

Recent research into the effect of nanoparticle organization on the electrical properties of nanocomposite films was used to create a hands-on laboratory for undergraduate education in nanomanufacturing. Students created two composites using solvent-based solution and polymer emulsion to show that a non-random microstructure can produce the required electrical conductivity with less added nanoparticles. Students evaluated the materials by 4-point probe and scanning electron microscopy.


2020 ◽  
Vol 117 (3) ◽  
pp. 1485-1495 ◽  
Author(s):  
Amir Bitran ◽  
William M. Jacobs ◽  
Xiadi Zhai ◽  
Eugene Shakhnovich

Many large proteins suffer from slow or inefficient folding in vitro. It has long been known that this problem can be alleviated in vivo if proteins start folding cotranslationally. However, the molecular mechanisms underlying this improvement have not been well established. To address this question, we use an all-atom simulation-based algorithm to compute the folding properties of various large protein domains as a function of nascent chain length. We find that for certain proteins, there exists a narrow window of lengths that confers both thermodynamic stability and fast folding kinetics. Beyond these lengths, folding is drastically slowed by nonnative interactions involving C-terminal residues. Thus, cotranslational folding is predicted to be beneficial because it allows proteins to take advantage of this optimal window of lengths and thus avoid kinetic traps. Interestingly, many of these proteins’ sequences contain conserved rare codons that may slow down synthesis at this optimal window, suggesting that synthesis rates may be evolutionarily tuned to optimize folding. Using kinetic modeling, we show that under certain conditions, such a slowdown indeed improves cotranslational folding efficiency by giving these nascent chains more time to fold. In contrast, other proteins are predicted not to benefit from cotranslational folding due to a lack of significant nonnative interactions, and indeed these proteins’ sequences lack conserved C-terminal rare codons. Together, these results shed light on the factors that promote proper protein folding in the cell and how biomolecular self-assembly may be optimized evolutionarily.


2020 ◽  
Vol 12 (6) ◽  
pp. 813-821 ◽  
Author(s):  
Junbo Liu ◽  
Wensi Zhao ◽  
Guangyu Wang ◽  
Shanshan Tang ◽  
Ruifa Jin

Theoretical study of a phenobarbital molecularly imprinted polymerization self-assembly system and its adsorption properties.


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