scholarly journals X-ray micro-computed tomography (micro-CT) of pyrite-permineralized fruits and seeds from the London Clay Formation (Ypresian) conserved in silicone oil: a critical evaluation1

2017 ◽  
Author(s):  
Margaret E. Collinson ◽  
Neil F. Adams ◽  
Steven R. Manchester ◽  
Gregory W. Stull ◽  
Fabiany Herrera ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Silicone Oil ◽  
Minimal Risk ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
Internal Morphology ◽  
London Clay ◽  
Clay Formation ◽  
Made In

Pyrite-permineralized fruits and seeds from the London Clay Formation (Ypresian, England) in the NHMUK are stored in silicone oil to retard decay processes. X-ray micro-computed tomography (micro-CT) has revealed internal morphology for multiple holotypes (including severely cracked and encrusted specimens) scanned in the protective fluid. Silicone oil alone has a similar X-ray attenuation to parts of the specimens, causing minor uncertainty for digitally rendered surfaces, but key systematic characters are readily visualised. Further work is needed to optimise visualization of fine-scale cellular detail. Labelling and segmentation to visualise important structures is achievable with these micro-CT datasets. However, manual labelling of individual slices is required and defining boundaries between features can be difficult due to differential pyritization and silicone oil permeation. Digital sections through specimens can be made in any orientation and digital locule casts can be produced for studies in virtual taphonomy. These achievements have been accomplished with minimal risk to specimens, which remained in silicone oil and were studied within the museum. The datasets provide a potentially permanent record of at-risk specimens, can be made widely available to researchers unable to visit the collections and to other interested parties, and they enable monitoring for future conservation.

scholarly journals X-ray micro-computed tomography (micro-CT) of pyrite-permineralized fruits and seeds from the London Clay Formation (Ypresian) conserved in silicone oil: a critical evaluation

Botany ◽  
2016 ◽  
Vol 94 (9) ◽  
pp. 697-711 ◽  
Author(s):  
Margaret E. Collinson ◽  
Neil F. Adams ◽  
Steven R. Manchester ◽  
Gregory W. Stull ◽  
Fabiany Herrera ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Silicone Oil ◽  
Critical Evaluation ◽  
Minimal Risk ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
London Clay ◽  
Clay Formation ◽  
Made In

Pyrite-permineralized fruits and seeds from the London Clay Formation (Ypresian; England) in the NHMUK are stored in silicone oil to retard decay processes. X-ray micro-computed tomography (micro-CT) has revealed internal morphology for multiple holotypes (including severely cracked and encrusted specimens) scanned in the protective fluid. Silicone oil alone has a similar X-ray attenuation to parts of the specimens, causing minor uncertainty for digitally rendered surfaces, but key systematic characters are readily visualized. Further work is needed to optimize visualization of fine-scale cellular detail. Labelling and segmentation to visualize important structures is achievable with these micro-CT datasets. However, manual labelling of individual slices is required, and defining boundaries between features can be difficult due to differential pyritization and silicone oil permeation. Digital sections through specimens can be made in any orientation and digital locule casts can be produced for studies in virtual taphonomy. These achievements have been accomplished with minimal risk to specimens, which remained in silicone oil and were studied within the museum. The datasets provide a potentially permanent record of at-risk specimens, can be made widely available to researchers unable to visit the collections and to other interested parties, and they enable monitoring for future conservation.

scholarly journals Revision of Icacinaceae from the Early Eocene London Clay flora based on X-ray micro-CT

Botany ◽  
2016 ◽  
Vol 94 (9) ◽  
pp. 713-745 ◽  
Author(s):  
Gregory W. Stull ◽  
Neil F. Adams ◽  
Steven R. Manchester ◽  
Dan Sykes ◽  
Margaret E. Collinson
Keyword(s):  
Evolutionary History ◽  
3D Structure ◽  
Early Eocene ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
Fossil Material ◽  
Technological Advances ◽  
London Clay ◽  
Clay Formation

The Early Eocene (Ypresian) London Clay Formation contains one of the most important fruit and seed assemblages from the Paleogene, including a large diversity of taxa (>350 spp.) preserved as pyrite permineralizations retaining 3D structure as well as anatomical detail. Despite the importance of the flora for understanding angiosperm biogeographic and evolutionary history, the majority of the fossil material has not been revisited since the original taxonomic treatments by E.M. Reid and M.E.J. Chandler. Given subsequent advances in our understanding of angiosperm phylogeny and fruit morphology, coupled with technological advances in imaging/visualizing fossil material, many of the taxa represented in the flora deserve further study. Here we present a revision of the pantropical family Icacinaceae using X-ray micro-computed tomography (micro-CT) images of 21 species from the flora. Based on the results, four new combinations are made, a new fossil-genus is established for a distinctive species with affinities to the Phytocreneae, and emended diagnoses are provided for eight taxa. Of the seven genera recognized from the flora, only one, Iodes Blume, is extant. This study offers important insights on the biogeographic and evolutionary history of Icacinaceae, which is one of the most abundant and diverse components of the flora from the London Clay Formation.

scholarly journals Investigating the Evolution of Fractures in Clay–based Ceramics During Repeated Freeze-Thawing Cycles Using Micro X-Ray Computed Tomography and Image Analysis

2020 ◽  
Author(s):  
Carlo Porfido ◽  
Roberto Rizzo ◽  
David Healy ◽  
Matteo Spagnuolo ◽  
Roberto Terzano ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Methodological Approach ◽  
Fracture Initiation ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
Freeze Thaw ◽  
Fracture Length ◽  
Grain Distribution ◽  
Fracture Damage

<div><div><div><p>This work presents a study on the fracturing behaviour of a quartz tempered clay-based ceramic subjected to damage in freeze-thaw cycles. X-ray micro-computed tomography (micro-CT) provided high-resolution imaging of the ceramic before and during the freeze-thaw treatment, allowing to analyse a fully water-saturated sample using a special thermal stage designed to keep the sample frozen during analyses. Micro-CT 3D renderings showed the internal features of the specimen (i.e., quartz grain distribution), the increment of fracture count and size, and the detachment of ceramic and/or temper fragments from the edges of the sample over the cycles. Selected 2D micrographs, before and after freeze-thawing treatment, were analysed using the MATLAB toolbox FracPaQ. This software provided detailed data on fracture length, intensity, density, orientation and connectivity, and enabled to interpret the process of fracture initiation and propagation inside the material. These results showed that the temper plays a crucial role in ceramic fracturing behaviour under freeze- thawing conditions, as damage propagation is influenced by quartz grain distribution and orientation within the material. The study described in this work, not only offers new insights into the fracture dynamics of freeze-thawed clay-based ceramics, but also presents a new methodological approach to quantitatively measure fracture damage in porous materials.</p></div></div></div>

scholarly journals A Review of Current Challenges and Case Study toward Optimizing Micro-Computed X-Ray Tomography of Carbon Fabric Composites

Materials ◽  
2020 ◽  
Vol 13 (16) ◽  
pp. 3606
Author(s):  
Armin Rashidi ◽  
Tina Olfatbakhsh ◽  
Bryn Crawford ◽  
Abbas S. Milani
Keyword(s):  
Computed Tomography ◽  
Woven Fabric ◽  
Fiber Reinforced Polymers ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
Fabric Composites ◽  
Low X ◽  
Composite Fabrics

X-ray computed tomography provides qualitative and quantitative structural and compositional information for a broad range of materials. Yet, its contribution to the field of advanced composites such as carbon fiber reinforced polymers is still limited by factors such as low imaging contrast, due to scarce X-ray attenuation features. This article, through a review of the state of the art, followed by an example case study on Micro-computed tomography (CT) analysis of low X-ray absorptive dry and prepreg carbon woven fabric composites, aims to highlight and address some challenges as well as best practices on performing scans that can capture key features of the material. In the case study, utilizing an Xradia Micro-CT-400, important aspects such as obtaining sufficient contrast, an examination of thin samples, sample size/resolution issues, and image-based modeling are discussed. The outcome of an optimized workflow in Micro-CT of composite fabrics can assist in further research efforts such as the generation of surface or volume meshes for the numerical modeling of underlying deformation mechanisms during their manufacturing processes.

scholarly journals Micro-CT study of Middle Ordovician Spumellaria (radiolarians) from western Newfoundland, Canada

2020 ◽  
Vol 94 (3) ◽  
pp. 417-435 ◽  
Author(s):  
Sarah Kachovich ◽  
Jonathan C. Aitchison
Keyword(s):  
Computed Tomography ◽  
Three Dimensional ◽  
Detailed Examination ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
Lower Paleozoic ◽  
X Ray ◽  
Middle Ordovician ◽  
Radiolarian Assemblage ◽  
Taxonomic Groups

AbstractA new, previously undescribed Middle Ordovician (middle Darriwilian: Dw2) radiolarian assemblage has been recovered from the Table Cove Formation at Piccadilly Quarry, western Newfoundland. Constituents of the fauna described herein are both distinctive and exceptionally well preserved. Three-dimensional X-ray micro-computed tomography (μ-CT) is used to make a detailed examination of four key spumellarian specimens. This technology enables visualization of hitherto ambiguous details of the internal morphologies of key lower Paleozoic taxonomic groups, among which a lack of knowledge has impeded resolution of higher taxonomic rankings.

The Application of X-ray Micro Computed Tomography (Micro-CT) of Core Sample for Estimation of Physicochemical Treatment Efficiency

2015 ◽  
Author(s):  
Maksim Sergeevich Orlov ◽  
Pavel Valeriyevich Roschin ◽  
Ivan Aleksandrovich Struchkov ◽  
Vladimir Tarasovich Litvin
Keyword(s):  
Computed Tomography ◽  
Core Sample ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
Treatment Efficiency ◽  
Physicochemical Treatment ◽  
X Ray

scholarly journals Investigating the Evolution of Fractures in Clay–based Ceramics During Repeated Freeze-Thawing Cycles Using Micro X-Ray Computed Tomography and Image Analysis

2020 ◽  
Author(s):  
Carlo Porfido ◽  
Roberto Rizzo ◽  
David Healy ◽  
Matteo Spagnuolo ◽  
Roberto Terzano ◽  
...  
Keyword(s):  
Computed Tomography ◽  
Methodological Approach ◽  
Fracture Initiation ◽  
Micro Ct ◽  
Micro Computed Tomography ◽  
X Ray ◽  
Freeze Thaw ◽  
Fracture Length ◽  
Grain Distribution ◽  
Fracture Damage

<div><div><div><p>This work presents a study on the fracturing behaviour of a quartz tempered clay-based ceramic subjected to damage in freeze-thaw cycles. X-ray micro-computed tomography (micro-CT) provided high-resolution imaging of the ceramic before and during the freeze-thaw treatment, allowing to analyse a fully water-saturated sample using a special thermal stage designed to keep the sample frozen during analyses. Micro-CT 3D renderings showed the internal features of the specimen (i.e., quartz grain distribution), the increment of fracture count and size, and the detachment of ceramic and/or temper fragments from the edges of the sample over the cycles. Selected 2D micrographs, before and after freeze-thawing treatment, were analysed using the MATLAB toolbox FracPaQ. This software provided detailed data on fracture length, intensity, density, orientation and connectivity, and enabled to interpret the process of fracture initiation and propagation inside the material. These results showed that the temper plays a crucial role in ceramic fracturing behaviour under freeze- thawing conditions, as damage propagation is influenced by quartz grain distribution and orientation within the material. The study described in this work, not only offers new insights into the fracture dynamics of freeze-thawed clay-based ceramics, but also presents a new methodological approach to quantitatively measure fracture damage in porous materials.</p></div></div></div>

scholarly journals LOTUS-inVivo Micro Computed Tomography System for Imaging of Small Animals and Ex-Vivo Biological Samples

2020 ◽  
Author(s):  
Mohammadreza Fouladi ◽  
Kamran Gholami ◽  
Hossein Ghadiri
Keyword(s):  
Computed Tomography ◽  
Biological Samples ◽  
Ex Vivo ◽  
Small Animal ◽  
Small Animals ◽  
Micro Ct ◽  
Ct Scanner ◽  
Micro Computed Tomography ◽  
Low Contrast ◽  
X Ray

X-ray Computed Tomography (CT), e.g. clinical CT scanners, basically provides Linear Attenuation Coefficients (LACs) of objects under study by the means of algorithmic reconstruction of acquired views of attenuated X-ray passing through the samples in different angles around the imaged sample. Micro Computed Tomography (micro-CT) basically works the same as clinical CT. It provides volumetric information representing the inner structure of objects with a resolution in the micron range. LOTUS-inVivo is a micro-CT scanner dedicated to imaging of small animals and ex-vivo biological samples. In the present study the spatial resolution and Low Contrast Detectability (LCD) of LOTUS-inVivo scanner were evaluated using standard phantoms. We aimed to prove the capability of LOTUS-inVivo for small animal and ex-vivo biological samples imaging using the measured image quality parameters, i.e. spatial resolution and low contrast detectability. By the means of analysis of bar and LCD phantom images, the limiting resolution of LOTUS-inVivo micro-CT scanner was measured about 2.7 µm and has been shown that it’s capable of resolving sizes greater than 12.5 µm. Also, we concluded that LOTUS-inVivo is capable of discriminating tissues with 3% differences in contrast relative to the background, for 1 mm bar size. Thus, the provided technical characteristics in this study have made LOTUS-inVivo as a suitable tool for small animal imaging.

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