scholarly journals The holobiont mind: A bridge between 4E-cognition and the microbiome

2021 ◽  
Author(s):  
Ismael Palacios-Garcia ◽  
Francisco J. Parada

All life on earth is intrinsically linked. At the very foundation of everyevolutionary interaction are microorganisms; integral components in thecomposition of both organisms and ecosystems. This perspectivechallenges the traditional conception of monogenetic biologicalindividuals, suggesting living beings are actually composite multi-speciescomplexes; holobionts. In the present article, we introduce the conceptof the holobiont mind; a biogenic conception of cognition. Wefurthermore expand on the idea of the mind as the emerging product ofmulti-genomic morphology of a composite agent, in ever changinginteraction with its ecological niche. We briefly review recent evidence onthe Brain-Gut-Microbiome axis and the Microbiome of the BuiltEnvironment in order to provide a bridge between the Holobiont Mindand the 4E approach to Cognition, two complementary lines of evidencethat have not been linked before, opening novel venues for research withdirect impact on health and disease.

2021 ◽  
pp. 105971232110530
Author(s):  
Ismael Palacios-García ◽  
Francisco J Parada

All life on earth is intrinsically linked. At the very foundation of every evolutionary interaction are microorganisms, integral components in the composition of both organisms and ecosystems. The available data and this perspective on the order of life challenge the traditional conception of monogenetic biological individuals, suggesting living beings are actually composite multi-species complexes: holobionts. In the present article, we introduce our perspective on the concept of the holobiont mind, a biogenic conception of cognition compatible with the 4E approach and the holobiont theory. We furthermore expand on the idea of the mind as the emerging product of multi-genomic morphology of a composite animal-agent, in ever-changing interaction with its ecological niche. We thus briefly review recent evidence on the brain–gut–microbiome axis and the Microbiome of the Built Environment in order to provide a bridge between the Holobiont Mind and the 4E approach to Cognition, two complementary lines of evidence that have not been linked before, opening novel venues for research with direct impact on health and disease.


BMC Medicine ◽  
2021 ◽  
Vol 19 (1) ◽  
Author(s):  
Sarah L. Boddy ◽  
Ilaria Giovannelli ◽  
Matilde Sassani ◽  
Johnathan Cooper-Knock ◽  
Michael P. Snyder ◽  
...  

Abstract Background Much progress has been made in mapping genetic abnormalities linked to amyotrophic lateral sclerosis (ALS), but the majority of cases still present with no known underlying cause. Furthermore, even in families with a shared genetic abnormality there is significant phenotypic variability, suggesting that non-genetic elements may modify pathogenesis. Identification of such disease-modifiers is important as they might represent new therapeutic targets. A growing body of research has begun to shed light on the role played by the gut microbiome in health and disease with a number of studies linking abnormalities to ALS. Main body The microbiome refers to the genes belonging to the myriad different microorganisms that live within and upon us, collectively known as the microbiota. Most of these microbes are found in the intestines, where they play important roles in digestion and the generation of key metabolites including neurotransmitters. The gut microbiota is an important aspect of the environment in which our bodies operate and inter-individual differences may be key to explaining the different disease outcomes seen in ALS. Work has begun to investigate animal models of the disease, and the gut microbiomes of people living with ALS, revealing changes in the microbial communities of these groups. The current body of knowledge will be summarised in this review. Advances in microbiome sequencing methods will be highlighted, as their improved resolution now enables researchers to further explore differences at a functional level. Proposed mechanisms connecting the gut microbiome to neurodegeneration will also be considered, including direct effects via metabolites released into the host circulation and indirect effects on bioavailability of nutrients and even medications. Conclusion Profiling of the gut microbiome has the potential to add an environmental component to rapidly advancing studies of ALS genetics and move research a step further towards personalised medicine for this disease. Moreover, should compelling evidence of upstream neurotoxicity or neuroprotection initiated by gut microbiota emerge, modification of the microbiome will represent a potential new avenue for disease modifying therapies. For an intractable condition with few current therapeutic options, further research into the ALS microbiome is of crucial importance.


2020 ◽  
pp. 107387 ◽  
Author(s):  
Corey C. Holt ◽  
David Bass ◽  
Grant D. Stentiford ◽  
Mark van der Giezen

2018 ◽  
Vol 85 (10) ◽  
Author(s):  
Alli Lynch ◽  
Seshu R. Tammireddy ◽  
Mary K. Doherty ◽  
Phillip D. Whitfield ◽  
David J. Clarke

ABSTRACTAcylated amino acids function as important components of the cellular membrane in some bacteria. Biosynthesis is initiated by theN-acylation of the amino acid, and this is followed by subsequentO-acylation of the acylated molecule, resulting in the production of the mature diacylated amino acid lipid. In this study, we use both genetics and liquid chromatography-mass spectrometry (LC-MS) to characterize the biosynthesis and function of a diacylated glycine lipid (GL) species produced inBacteroides thetaiotaomicron. We, and others, have previously reported the identification of a gene, namedglsBin this study, that encodes anN-acyltransferase activity responsible for the production of a monoacylated glycine calledN-acyl-3-hydroxy-palmitoyl glycine (or commendamide). In all of theBacteroidalesgenomes sequenced so far, theglsBgene is located immediately downstream from a gene, namedglsA, that is also predicted to encode a protein with acyltransferase activity. We use LC-MS to show that the coexpression ofglsBandglsAresults in the production of GL inEscherichia coli. We constructed a deletion mutant of theglsBgene inB. thetaiotaomicron, and we confirm thatglsBis required for the production of GL inB. thetaiotaomicron. Moreover, we show thatglsBis important for the ability ofB. thetaiotaomicronto adapt to stress and colonize the mammalian gut. Therefore, this report describes the genetic requirements for the biosynthesis of GL, a diacylated amino acid species that contributes to fitness in the human gut bacteriumB. thetaiotaomicron.IMPORTANCEThe gut microbiome has an important role in both health and disease of the host. The mammalian gut microbiome is often dominated by bacteria from theBacteroidales, an order that includesBacteroidesandPrevotella. In this study, we have identified an acylated amino acid, called glycine lipid, produced byBacteroides thetaiotaomicron, a beneficial bacterium originally isolated from the human gut. In addition to identifying the genes required for the production of glycine lipids, we show that glycine lipids have an important role during the adaptation ofB. thetaiotaomicronto a number of environmental stresses, including exposure to either bile or air. We also show that glycine lipids are important for the normal colonization of the murine gut byB. thetaiotaomicron. This work identifies glycine lipids as an important fitness determinant inB. thetaiotaomicronand therefore increases our understanding of the molecular mechanisms underpinning colonization of the mammalian gut by beneficial bacteria.


1871 ◽  
Vol 16 (76) ◽  
pp. 538-563
Author(s):  
Daniel H. Tuke

Under the present section it remains to consider the influence of the emotions in inducing hydrophobia, tetanus, and catalepsy.


2011 ◽  
Vol 19 (7) ◽  
pp. 349-359 ◽  
Author(s):  
Elaine Holmes ◽  
Jia V. Li ◽  
Thanos Athanasiou ◽  
Hutan Ashrafian ◽  
Jeremy K. Nicholson

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