scholarly journals Prevalence of Stony Coral Tissue Loss Disease at El Seco, a Mesophotic Reef System off Vieques Island, Puerto Rico

2021 ◽  
Vol 8 ◽  
Author(s):  
Stacey M. Williams ◽  
Jorge García-Sais ◽  
Jorge Sabater-Clavell
Keyword(s):  
Puerto Rico ◽  
Coral Reef ◽  
Coral Cover ◽  
Coral Disease ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Stony Coral ◽  
Reef System ◽  
Coral Communities ◽  
Mesophotic Reef

Mesophotic coral ecosystems (MCEs) are ecologically and functionally vital, as they are Essential Fish Habitats that function as refugia for corals and sponges of shallow-water reefs. Stony Coral Tissue Loss Disease (SCTLD) is a relatively new lethal coral disease, first affecting coral reefs in Florida and has now spread through most of the Caribbean. SCTLD was observed in Puerto Rico in December 2019 in Culebra Island. Since then, SCTLD has appeared along the east coast of Puerto Rico, affecting primarily shallow reefs in San Juan, Culebra and Vieques Island, and Fajardo. During late June and July 2020, four mesophotic reef habitats were surveyed at El Seco (off Vieques Island), on the southeast coast of Puerto Rico. SCTLD was observed at colonized pavement (CPRT – 23–30 m), bank coral reef (BCR – 35–40 m), patch coral reef (PCR – 36–42 m), and rhodolith (Rhodo – 40–50 m) habitats. The mean percent substrate cover by sessile-benthic categories varied significantly between habitats (PERMANOVA, p < 0.001), with a higher mean (± SE) coral cover at BCR (26.95 ± 5.60%), followed by PCR (12.88 ± 3.88%). SCTLD was detected in all habitats, but the disease prevalence was significantly higher at BCR, ranging from 9.70 to 21.13% of colonies infected (Kruskal-Wallis ANOVA, p < 0.007). Even though PCR habitats exhibited less coral cover, SCTLD prevalence was still elevated ranging from 6.66 to 15.07%. The deepest record of SCTLD at El Seco was 40.9 m. The majority (∼98%) of the corals infected with the disease were from the Orbicella complex spp. (faveolata/franksi). However, there were other infected species, such as Agaricia grahamae, A. lamarcki, Montastraea cavernosa, and Porites astreoides. As seen in the surveys conducted in 2011 and 2020, the loss of coral cover allows for the emergence of other benthic “detractors,” such as peyssonnelids, specifically Ramicrusta spp. Ramicrusta spp., an aggressive encrusting red alga known to take over available space and overgrow corals, significantly increased its substrate cover at the impacted reefs. Therefore, the severity and virulence of SCTLD will most likely have severe and long-lasting negative impacts on the coral communities at El Seco mesophotic reef system.

scholarly journals Impacts of Stony Coral Tissue Loss Disease (SCTLD) on Coral Community Structure at an Inshore Patch Reef of the Upper Florida Keys Using Photomosaics

2021 ◽  
Vol 8 ◽  
Author(s):  
Graham Kolodziej ◽  
Michael S. Studivan ◽  
Arthur C. R. Gleason ◽  
Chris Langdon ◽  
Ian C. Enochs ◽  
...  
Keyword(s):  
Community Structure ◽  
Coral Reef ◽  
Coral Cover ◽  
Florida Keys ◽  
Coral Community ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Coral Mortality ◽  
Stony Coral ◽  
Reef Tract

Since the appearance of stony coral tissue loss disease (SCTLD) on reefs off Miami in 2014, this unprecedented outbreak has spread across the entirety of Florida’s coral reef tract, as well as to many territories throughout the Caribbean. The endemic zone reached the upper Florida Keys by 2016, resulting in partial or complete mortality of coral colonies across numerous species. Disease was first observed at Cheeca Rocks (Islamorada, Florida) in the beginning of 2018, with reports of coral mortality peaking mid-year. The disease was still present at Cheeca Rocks as of March 2020, however, to a lesser degree compared to the initial outbreak. Annual monitoring efforts have been ongoing at Cheeca Rocks since 2012, including repeated benthic photomosaics of a 330 m2 survey zone, spanning six replicate sites. As such, a repository of coral community composition data exists for before and after the disease outbreak that was analyzed to assess the impacts of SCTLD on reef communities at an upper Florida Keys inshore reef. Cheeca Rocks is hypothesized to be a resilient reef due to its persistent high coral cover despite its inshore location, which subjects corals to fluctuating water quality and marginal environmental conditions. Coral populations here have been shown to recover from bleaching events and heat stress with minimal coral mortality. Though colonies of coral species characterized as highly and moderately susceptible to SCTLD (e.g., Colpophyllia natans, Diploria labyrinthiformis, Pseudodiploria strigosa, Orbicella annularis, and O. faveolata) suffered mortality as a result of the outbreak with an average loss of 16.42% relative cover by species, the overall impacts on coral cover and community structure were relatively low, contributing to a loss of total coral cover of only 1.65%. Comparison of photomosaic data to other studies indicate Cheeca Rocks may not have been affected as severely as other sites on Florida’s coral reef tract, underlying this site’s potential role in coral resilience to stressors including bleaching events, land-based pollution, and disease epizootics.

scholarly journals A rapid spread of the Stony Coral Tissue Loss Disease outbreak in the Mexican Caribbean

2019 ◽  
Author(s):  
Lorenzo Alvarez-Filip ◽  
Nuria Estrada-Saldívar ◽  
Esmeralda Pérez-Cervantes ◽  
Ana Molina-Hernández ◽  
Francisco J. Gonzalez-Barrios
Keyword(s):  
Coral Disease ◽  
Disease Outbreak ◽  
Disease Prevalence ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Similar Species ◽  
Western Atlantic ◽  
Stony Coral ◽  
Mexican Caribbean ◽  
Coral Communities

Caribbean reef corals have experienced unprecedented declines from climate change, anthropogenic stressors and infectious diseases in recent decades. Since 2014 a highly lethal, new disease, called stony coral tissue loss disease (SCTLD), has impacted many species in Florida. During the summer of 2018 we noticed an anomalously high disease prevalence affecting different coral species in the northern portion of the Mexican Caribbean. We assessed the severity of this outbreak in 2018/2019 using the AGRRA coral protocol to survey 82 reef sites across the Mexican Caribbean. Then, using a subset of 14 sites we detailed information from before the outbreak (2016/2017) to explore the consequences of the disease on the condition and composition of coral communities. Our findings show that the disease outbreak has already spread across the entire region, affecting similar species (with similar disease patterns) to those previously described for Florida. However, we observed a great variability in prevalence and tissue mortality that was not attributable to any geographical gradient. Using long-term data, we determined that there is no evidence of such high coral disease prevalence anywhere in the region before 2018, which suggests that the entire Mexican Caribbean (~450 km) was afflicted by the disease within a few months. The analysis of sites that contained pre-outbreak information showed that this event considerably increased coral mortality and severely changed the structure of coral communities in the region. Given the high prevalence and lethality of this disease, and the high number of susceptible species, we encourage reef researchers, managers and stakeholders across the Western Atlantic to accord it the highest priority for the near future.

scholarly journals Effects of the Stony Coral Tissue Loss Disease Outbreak on Coral Communities and the Benthic Composition of Cozumel Reefs

2021 ◽  
Vol 8 ◽  
Author(s):  
Nuria Estrada-Saldívar ◽  
Blanca A. Quiroga-García ◽  
Esmeralda Pérez-Cervantes ◽  
Omar O. Rivera-Garibay ◽  
Lorenzo Alvarez-Filip
Keyword(s):  
Coral Cover ◽  
Coastal Development ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Coral Mortality ◽  
Benthic Assemblages ◽  
Stony Coral ◽  
Coral Communities ◽  
The Caribbean ◽  
Benthic Composition

In the Caribbean, disease outbreaks have emerged as significant drivers of coral mortality. Stony Coral Tissue Loss Disease (SCTLD) is a novel white plague-type disease that was first reported off the Florida coast in 2014. This disease affects >20 coral species and is spreading rapidly throughout the Caribbean. In December 2018, SCTLD reached southwestern (SW) Cozumel, one of the healthiest reef systems in the Caribbean. In this study, we integrate data from multiple survey protocols conducted between July 2018 and April 2020 to track the progression of the outbreak in SW Cozumel and to quantify the impacts of SCTLD on coral communities and the benthic composition of reefs. Given that the SCTLD outbreak coincided with a period of prolonged thermal stress that concluded in widespread coral bleaching in autumn 2019, we also investigated whether this event further exacerbated coral mortality. Our findings show that SCTLD spread throughout SW Cozumel in only 2 months and reached a peak after only 5 months. By the summer of 2019, most of the afflicted corals were already dead. Species of the families Meandrinidae, Faviinae, and Montastraeidae showed 33–95% mortality. The widespread coral die-off caused an overall loss of 46% in coral cover followed by a rapid increase of algae cover across all surveyed reefs that persisted until at least April 2020. In November 2019, more than 15% of surveyed coral colonies were bleached. However, we did not find that bleaching further increased coral mortality at either the colony or the community level, which suggests that the coral communities were able to recover from this event despite still being affected by the disease. In conclusion, SCTLD is radically changing the ecology of coral reefs by decimating the populations of several key reef-builders and reconfiguring the benthic assemblages. The actions needed to restore coral populations have to be accompanied by stringent controls related to the effects of climate change, coastal development, and wastewater treatment to improve coral conditions and ecosystem resilience.

scholarly journals A rapid spread of the Stony Coral Tissue Loss Disease outbreak in the Mexican Caribbean

2019 ◽  
Author(s):  
Lorenzo Alvarez-Filip ◽  
Nuria Estrada-Saldívar ◽  
Esmeralda Pérez-Cervantes ◽  
Ana Molina-Hernández ◽  
Francisco J. Gonzalez-Barrios
Keyword(s):  
Coral Disease ◽  
Disease Outbreak ◽  
Disease Prevalence ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Similar Species ◽  
Western Atlantic ◽  
Stony Coral ◽  
Mexican Caribbean ◽  
Coral Communities

Caribbean reef corals have experienced unprecedented declines from climate change, anthropogenic stressors and infectious diseases in recent decades. Since 2014 a highly lethal, new disease, called stony coral tissue loss disease (SCTLD), has impacted many species in Florida. During the summer of 2018 we noticed an anomalously high disease prevalence affecting different coral species in the northern portion of the Mexican Caribbean. We assessed the severity of this outbreak in 2018/2019 using the AGRRA coral protocol to survey 82 reef sites across the Mexican Caribbean. Then, using a subset of 14 sites we detailed information from before the outbreak (2016/2017) to explore the consequences of the disease on the condition and composition of coral communities. Our findings show that the disease outbreak has already spread across the entire region, affecting similar species (with similar disease patterns) to those previously described for Florida. However, we observed a great variability in prevalence and tissue mortality that was not attributable to any geographical gradient. Using long-term data, we determined that there is no evidence of such high coral disease prevalence anywhere in the region before 2018, which suggests that the entire Mexican Caribbean (~450 km) was afflicted by the disease within a few months. The analysis of sites that contained pre-outbreak information showed that this event considerably increased coral mortality and severely changed the structure of coral communities in the region. Given the high prevalence and lethality of this disease, and the high number of susceptible species, we encourage reef researchers, managers and stakeholders across the Western Atlantic to accord it the highest priority for the near future.

scholarly journals The Emergence and Initial Impact of Stony Coral Tissue Loss Disease (SCTLD) in the United States Virgin Islands

2021 ◽  
Vol 8 ◽  
Author(s):  
Marilyn E. Brandt ◽  
Rosmin S. Ennis ◽  
Sonora S. Meiling ◽  
Joseph Townsend ◽  
Kathryn Cobleigh ◽  
...  
Keyword(s):  
Coral Cover ◽  
The United States ◽  
Virgin Islands ◽  
Disease Prevalence ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Focal Lesions ◽  
Stony Coral ◽  
Coral Communities ◽  
The U.S

Coral communities in the Caribbean face a new and deadly threat in the form of the highly virulent multi-host stony coral tissue loss disease (SCTLD). In late January of 2019, a disease with signs and characteristics matching that of SCTLD was found affecting a reef off the coast of St. Thomas in the U.S. Virgin Islands (USVI). Identification of its emergence in the USVI provided the opportunity to document the initial evolution of its spatial distribution, coral species susceptibility characteristics, and its comparative impact on coral cover at affected and unaffected coral reef locations. Re-assessments at sentinel sites and long-term monitoring locations were used to track the spread of the disease, assess species affected, and quantify its impact. The disease was initially limited to the southwest of St. Thomas for several months, then spread around the island and to the neighboring island of St. John to the east. Differences in disease prevalence among species were similar to reports of SCTLD from other regions. Highly affected species included Colpophyllia natans, Eusmilia fastigiata, Montastraea cavernosa, Orbicella spp., and Pseudodiploria strigosa. Dendrogyra cylindrus and Meandrina meandrites were also highly affected but showed more variability in disease prevalence, likely due to initial low abundances and the rapid loss of colonies due to disease. Siderastrea spp. were less affected and showed lower prevalence. Species previously reported as unaffected or data deficient that were found to be affected by SCTLD included Agaricia spp., Madracis spp., and Mycetophyllia spp. We also observed multi-focal lesions at SCTLD-affected sites on colonies of Porites astreoides, despite that poritids have previously been considered low or not susceptible to SCTLD. Loss of coral cover due to acute tissue loss diseases, which were predominantly SCTLD, was significant at several monitoring locations and was more impactful than previous mass bleaching events at some sites. There are no signs that the USVI SCTLD outbreak is abating, therefore it is likely that this disease will become widespread across the U.S. Caribbean and British Virgin Islands in the near future.

scholarly journals Detecting sedimentation impacts to coral reefs resulting from dredging the Port of Miami, Florida USA

2016 ◽  
Author(s):  
Margaret W Miller ◽  
Jocelyn Karazsia ◽  
Carolyn E Groves ◽  
Sean Griffin ◽  
Tom Moore ◽  
...  
Keyword(s):  
Coral Reef ◽  
Coral Reefs ◽  
Coral Disease ◽  
Sediment Accumulation ◽  
Biological Response ◽  
Time Frame ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Live Coral ◽  
Monitoring Methods

The federal channel at Port of Miami, Florida, USA, was dredged between late 2013 and early 2015, to widen and deepen the channel. While the precise effects of the dredging on surrounding coral reefs are not well quantified, previously published remote sensing analyses, as well as agency and anecdotal reports suggest the most severe and largest area of sedimentation occurred on a coral reef feature referred to as the Inner Reef, particularly in the sector north of the channel. A regional warm-water mass bleaching event followed by a coral disease outbreak during this same time frame confounded the assessment of dredging-related impacts to coral reefs adjacent to the federal channel. In-water field assessments conducted after the completion of dredging and a time series analysis of tagged corals photographed pre-, during, and post-dredging, are used to discern dredging-related sedimentation impacts for the Inner Reef north. Results indicate increased sediment accumulation, severe in certain times and places, and an associated biological response, including significantly greater proportion of live coral tissue loss, occurred within coral reef sites located closer to the channel. Dredging projects near valuable and sensitive habitats subject to local and global stressors require monitoring methods capable of discerning non-dredging related impacts and adaptive management to ensure predicted and unpredicted project-related impacts are quantified. Anticipated increasing frequency and intensity of warming stress also suggests that manageable- but- unavoidable local stressors such as dredging should be partitioned from the warmest times of year.

scholarly journals Stony Coral Tissue Loss Disease biomarker bacteria identified in corals and overlying waters using a rapid field-based sequencing approach

2021 ◽  
Author(s):  
Cynthia C. Becker ◽  
Marilyn Brandt ◽  
Carolyn A. Miller ◽  
Amy Apprill
Keyword(s):  
Coral Disease ◽  
The United States ◽  
Virgin Islands ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Rna Sequences ◽  
Disease Biomarker ◽  
Stony Coral ◽  
Ribosomal Rna Sequences ◽  
Reef Tract

AbstractStony Coral Tissue Loss Disease (SCTLD) is a devastating disease. Since 2014, it has spread along the entire Florida Reef Tract, presumably via a water-borne vector, and into the greater Caribbean. It was first detected in the United States Virgin Islands (USVI) in January 2019. To more quickly identify disease biomarker microbes, we developed a rapid pipeline for microbiome sequencing. Over a span of 10 days we collected, processed, and sequenced coral tissue and near-coral seawater microbiomes from diseased and apparently healthy Colpophyllia natans, Montastraea cavernosa, Meandrina meandrites and Orbicella franksi. Analysis of the resulting bacterial and archaeal 16S ribosomal RNA sequences revealed 25 biomarker amplicon sequence variants (ASVs) enriched in diseased tissue. These biomarker ASVs were additionally recovered in near-coral seawater (within 5 cm of coral surface), a potential recruitment zone for pathogens. Phylogenetic analysis of the biomarker ASVs belonging to Vibrio, Arcobacter, Rhizobiaceae, and Rhodobacteraceae revealed relatedness to other coral disease-associated bacteria and lineages novel to corals. Additionally, four ASVs (Algicola, Cohaesibacter, Thalassobius and Vibrio) were exact sequence matches to microbes previously associated with SCTLD. This work represents the first rapid coral disease sequencing effort and identifies biomarkers of SCTLD that could be targets for future SCTLD research.

scholarly journals Association of butterflyfishes and stony coral tissue loss disease in the Florida Keys

Coral Reefs ◽  
2020 ◽  
Vol 39 (6) ◽  
pp. 1581-1590
Author(s):  
Kara R. Noonan ◽  
Michael J. Childress
Keyword(s):  
Coral Disease ◽  
Florida Keys ◽  
Time Lapse ◽  
Reef Fishes ◽  
Disease Prevalence ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Individual Species ◽  
Stony Coral ◽  
Surface Areas

AbstractSince 2014, stony coral tissue loss disease (SCTLD) has rapidly spread throughout the Florida reef tract infecting and killing dozens of coral species. Previous studies have found that corallivorous fishes, such as butterflyfishes, are positively correlated with coral disease prevalence at both local and regional scales. This study investigates the association of SCTLD infection and butterflyfish abundance and behaviors on ten reefs in the middle Florida Keys. Divers conducted video surveys of reef fish abundance and disease prevalence in June 2017, 2018, and 2019; before, during, and after the outbreak of SCTLD infections. SCTLD prevalence increased from 3.2% in 2017 to 36.9% in 2018 and back to 2.7% in 2019. Butterflyfish abundances also showed a similar pattern with a twofold increase in abundance in 2018 over abundances in 2017 and 2019. To better understand the association of individual species of butterflyfishes and diseased corals, 60 coral colonies (20 healthy, 20 diseased, 20 recently dead) were tagged and monitored for butterflyfish activity using both diver-based AGGRA fish counts and 1-h time-lapse videophotography collected in the summers of 2018 and 2019. All reef fishes were more abundant on corals with larger surface areas of live tissue, but only the foureye butterflyfish preferred corals with larger surface areas of diseased tissues. Estimates of association indicate that foureye butterflyfish were found significantly more on diseased corals than either healthy or recently dead corals when compared with the other species of butterflyfishes. Foureye butterflyfish were observed to feed directly on the SCTLD line of infection, while other butterflyfish were not. Furthermore, association of foureye butterflyfish with particular diseased corals decreased from 2018 to 2019 as the SCTLD infections disappeared. Our findings suggest that foureye butterflyfish recruit to and feed on SCTLD-infected corals which may influence the progression and/or transmission of this insidious coral disease.

scholarly journals Fine Scale Temporal and Spatial Dynamics of the Stony Coral Tissue Loss Disease Outbreak Within the Lower Florida Keys

2021 ◽  
Vol 8 ◽  
Author(s):  
Sara D. Williams ◽  
Cory S. Walter ◽  
Erinn M. Muller
Keyword(s):  
Spatial Clustering ◽  
Coral Cover ◽  
Spatial Scales ◽  
Florida Keys ◽  
Incidence Rates ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Maximum Temperature ◽  
Small Scale ◽  
Stony Coral

One of the latest threats to Florida’s Coral Reef is the stony coral tissue loss disease (SCTLD) outbreak which affects all but a few Caribbean scleractinian species and has spread throughout the Caribbean since 2014. Without a known pathogen, ecological studies of disease dynamics are essential for understanding SCTLD susceptibility at the individual colony and reef level. We investigated the epizootiology of the SCTLD outbreak in the lower Florida Keys at two spatial scales (among reefs ∼1 km and within reefs <10 m) over a 19 month period. In May 2018, three sites absent of SCTLD were established to characterize coral demographics (i.e., live tissue cover and colony diameter) along an offshore to nearshore gradient, and were subsequently surveyed for disease every 2–3 weeks until December 2019. SCTLD was first noted within the offshore and mid-channel reef sites in early October 2018 and later appeared at the nearshore site in early February 2019. SCTLD was negatively correlated with thermal stress, showing reduced progression and incidence rates after 2–3 weeks of water temperatures above the mean monthly maximum temperature for the region (i.e., 2–3 degree heating weeks). Although Pseudodiploria strigosa, Dichocoenia stokesii, Colpophyllia natans, and Diploria labyrinthiformis were the most susceptible species at our sites, areas with more Montastraea cavernosa and Orbicella faveolata colonies had higher prevalence and greater tissue loss associated with disease. The disease was more severe within quadrats with high species diversity, high coral cover, and disproportionately affected larger colonies. Our spatial analyses suggest that (1) SCTLD followed a contagious disease model within small (<10 m) spatial scales, (2) colonies within 1.5–3 m of a diseased coral were at higher risk for subsequently showing disease signs compared with those farther away, and (3) high incidence rates coincided with the loss of small scale (<10 m radius) spatial clustering, suggesting pulses of contagious spread on large spatial scales.

scholarly journals A rapid spread of the stony coral tissue loss disease outbreak in the Mexican Caribbean

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e8069 ◽  
Author(s):  
Lorenzo Alvarez-Filip ◽  
Nuria Estrada-Saldívar ◽  
Esmeralda Pérez-Cervantes ◽  
Ana Molina-Hernández ◽  
Francisco J. González-Barrios
Keyword(s):  
Coral Species ◽  
Disease Outbreak ◽  
Disease Prevalence ◽  
Tissue Loss ◽  
Coral Tissue ◽  
Similar Species ◽  
Western Atlantic ◽  
Stony Coral ◽  
Mexican Caribbean ◽  
Coral Communities

Caribbean reef corals have experienced unprecedented declines from climate change, anthropogenic stressors and infectious diseases in recent decades. Since 2014, a highly lethal, new disease, called stony coral tissue loss disease, has impacted many reef-coral species in Florida. During the summer of 2018, we noticed an anomalously high disease prevalence affecting different coral species in the northern portion of the Mexican Caribbean. We assessed the severity of this outbreak in 2018/2019 using the AGRRA coral protocol to survey 82 reef sites across the Mexican Caribbean. Then, using a subset of 14 sites, we detailed information from before the outbreak (2016/2017) to explore the consequences of the disease on the condition and composition of coral communities. Our findings show that the disease outbreak has already spread across the entire region by affecting similar species (with similar disease patterns) to those previously described for Florida. However, we observed a great variability in prevalence and tissue mortality that was not attributable to any geographical gradient. Using long-term data, we determined that there is no evidence of such high coral disease prevalence anywhere in the region before 2018, which suggests that the entire Mexican Caribbean was afflicted by the disease within a few months. The analysis of sites that contained pre-outbreak information showed that this event considerably increased coral mortality and severely changed the structure of coral communities in the region. Given the high prevalence and lethality of this disease, and the high number of susceptible species, we encourage reef researchers, managers and stakeholders across the Western Atlantic to accord it the highest priority for the near future.

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