spatial clustering
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2022 ◽  
Vol 10 (4) ◽  
pp. 554-561
Author(s):  
Denny Jales Manalu ◽  
Rita Rahmawati ◽  
Tatik Widiharih

Earthquake is a natural disaster which is quite serious in Indonesia, especially on Sulawesi Island. Earthquake is fearful because it can’t be predicted when it will come, where it will come, and how strong the vibration, that often causes fatal damage and casualties. In effort to minimize losses caused by earthquake, it is necessary to divide areas which are easily affected by earthquake. One of the methods that can be used in dividing the area is by using the clustering technique. This research by using a clustering method with the ST-DBSCAN (Spatial Temporal-Density Based Spatial Clustering Application with Noise) algorithm on dataset of earthquake points in Sulawesi Island in 2019. This method by using the spatial distance parameters (Eps1 = 0.45), the temporal distance parameters (Eps2 = 7), and minimum number of cluster members (MinPts = 4), resulting in a total of 60 clusters with 8 large clusters and 216 noises 


2022 ◽  
Author(s):  
Lucila Gisele Alvarez Zuzek ◽  
Casey M Zipfel ◽  
Shweta Bansal

The phenomenon of vaccine hesitancy behavior has gained ground over the last three decades, jeopardizing the maintenance of herd immunity. This behavior tends to cluster spatially, creating pockets of unprotected sub-populations that can be hotspots for outbreak emergence. What remains less understood are the social mechanisms that can give rise to spatial clustering in vaccination behavior, particularly at the landscape scale. We focus on the presence of spatial clustering, and aim to mechanistically understand how different social processes can give rise to this phenomenon. In particular, we propose two hypotheses to explain the presence of spatial clustering: (i) social selection, in which vaccine-hesitant individuals share socio-demographic traits, and clustering of these traits generates spatial clustering in vaccine hesitancy; and (ii) social influence, in which hesitant behavior is contagious and spreads through neighboring societies, leading to hesitant clusters. Adopting a theoretical spatial network approach, we explore the role of these two processes in generating patterns of spatial clustering in vaccination behaviors under a range of spatial structures. We find that both processes are independently capable of generating spatial clustering, and the more spatially structured the social dynamics in a society are, the higher spatial clustering in vaccine-hesitant behavior it realizes. Together, we demonstrate that these processes result in unique spatial configurations of hesitant clusters, and we validate our models on both processes with fine-grain empirical data on vaccine hesitancy, social determinants, and social connectivity in the US. Finally, we propose, and evaluate the effectiveness of, two novel intervention strategies to diminish hesitant behavior. Our generative modeling approach informed by unique empirical data provides insights on the role of complex social processes in driving spatial heterogeneity in vaccine hesitancy.


2022 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Amanpreet Singh ◽  
Prem Chhetri ◽  
Rajiv Padhye

PurposeThe paper models the effect of spatial clustering on various dimensions of inter-firm competitive rivalry among port logistics firms using Porter's five forces model.Design/methodology/approachA survey-based quantitative approach is adopted to collect data from logistics firms, which are directly or indirectly dependent on the Port of Melbourne in Australia. A structural equation modelling (SEM) technique is used to examine the theorised relationships between various dimensions of inter-firm competitive rivalry and the tendency of spatial clustering of logistics firms in the vicinity of Port of Melbourne.FindingsThe results indicate that the inter-firm competitive rivalry increases significantly when logistics firms are spatially clustered. This effect is further augmented when they cluster around the port. Co-location of firms near the port tends to increase “bargaining power of buyers”, whilst indirectly affecting “competitive rivalry” via “threats of substitutes”. This indicates that co-location enhances the bargaining power of buyers through the greater availability of substitute services that in turn promotes competitive rivalry among firms. However, co-location has an insignificant effect on “barriers to entry” and “bargaining power of suppliers”. Low entry barrier thus favours high competitive rivalry among firms. Hence, this paper validates the Porter's cluster and five forces models that confirm the positive effect of port logistics clusters (PLCs) on bargaining power of buyers and indirect effect on competitive rivalry partially mediated through threats of substitutes.Practical implicationsThis study provides empirically grounded evidence for firms to evaluate co-location decision choices and help buyers and sellers to devise business strategies to enhance inter-firm competitive rivalry and bargaining power.Originality/valueThis is the first systematic attempt to empirically validate Porter's five forces model in the context of PLC. Furthermore, the conceptualisation of PLC concept both as spatial and functional constructs (i.e. dependency on port) is novel. This study thus has broadened the meaning of cluster from a geographic entity to a more useful functional construct to reflect inter-firm dependencies.


2022 ◽  
Vol 12 (2) ◽  
pp. 612
Author(s):  
Chunhui Ma ◽  
Tianhao Zhao ◽  
Gaochao Li ◽  
Anan Zhang ◽  
Lin Cheng

As an essential load of the concrete dam, the abnormal change of uplift pressure directly threatens the safety and stability of the concrete dam. Therefore, it is of great significance to accurately and efficiently excavate the hidden information of the uplift pressure monitoring data to clarify the safety state of the concrete dam. Therefore, in this paper, density-based spatial clustering of applications with noise (DBSCAN) method is used to intelligently identify the abnormal occurrence point and abnormal stable stage in the monitoring data. Then, an application method of measured uplift pressure is put forward to accurately reflect the spatial distribution and abnormal position of uplift pressure in the dam foundation. It is easy to calculate and connect with the finite element method through self-written software. Finally, the measured uplift pressure is applied to the finite element model of the concrete dam. By comparing the structural behavior of the concrete dam under the design and measured uplift pressure, the influence of abnormal uplift pressure on the safety state of the concrete dam is clarified, which can guide the project operation. Taking a 98.5 m concrete arch dam in western China as an example, the above analysis ideas and calculation methods have been verified. The abnormal identification method and uplift pressure applying method can provide ideas and tools for the structural diagnosis of a concrete dam.


2022 ◽  
Vol 23 (1) ◽  
Author(s):  
Junhui Qiu ◽  
Qi Zhou ◽  
Weicai Ye ◽  
Qianjun Chen ◽  
Yun-Juan Bao

Abstract Background The gene-specific sweep is a selection process where an advantageous mutation along with the nearby neutral sites in a gene region increases the frequency in the population. It has been demonstrated to play important roles in ecological differentiation or phenotypic divergence in microbial populations. Therefore, identifying gene-specific sweeps in microorganisms will not only provide insights into the evolutionary mechanisms, but also unravel potential genetic markers associated with biological phenotypes. However, current methods were mainly developed for detecting selective sweeps in eukaryotic data of sparse genotypes and are not readily applicable to prokaryotic data. Furthermore, some challenges have not been sufficiently addressed by the methods, such as the low spatial resolution of sweep regions and lack of consideration of the spatial distribution of mutations. Results We proposed a novel gene-centric and spatial-aware approach for identifying gene-specific sweeps in prokaryotes and implemented it in a python tool SweepCluster. Our method searches for gene regions with a high level of spatial clustering of pre-selected polymorphisms in genotype datasets assuming a null distribution model of neutral selection. The pre-selection of polymorphisms is based on their genetic signatures, such as elevated population subdivision, excessive linkage disequilibrium, or significant phenotype association. Performance evaluation using simulation data showed that the sensitivity and specificity of the clustering algorithm in SweepCluster is above 90%. The application of SweepCluster in two real datasets from the bacteria Streptococcus pyogenes and Streptococcus suis showed that the impact of pre-selection was dramatic and significantly reduced the uninformative signals. We validated our method using the genotype data from Vibrio cyclitrophicus, the only available dataset of gene-specific sweeps in bacteria, and obtained a concordance rate of 78%. We noted that the concordance rate could be underestimated due to distinct reference genomes and clustering strategies. The application to the human genotype datasets showed that SweepCluster is also applicable to eukaryotic data and is able to recover 80% of a catalog of known sweep regions. Conclusion SweepCluster is applicable to a broad category of datasets. It will be valuable for detecting gene-specific sweeps in diverse genotypic data and provide novel insights on adaptive evolution.


Buildings ◽  
2022 ◽  
Vol 12 (1) ◽  
pp. 35
Author(s):  
Jayden Mitchell Perry ◽  
Sara Shirowzhan ◽  
Christopher James Pettit

The hospitality industry in Sydney, Australia, has been subject to several regulatory interventions in the last decade, including lockout laws, COVID-19 lockdowns and land use planning restrictions. This study has sought to explore the spatial implications of these policies in Inner Sydney between 2012 to 2021. Methods based in spatial analysis were applied to a database of over 40,000 licensed venues. Point pattern analysis and spatial autocorrelation methods were used to identify spatially significant venue clusters. Space-time cube and emerging-hot-spot methods were used to explore clusters over time. The results indicate that most venues are located in the Sydney CBD on business-zoned land and show a high degree of spatial clustering. Spatio-temporal analysis reveals this clustering to be consistent over time, with variations between venue types. Venue numbers declined following the introduction of the lockout laws, with numbers steadily recovering in the following years. There was no discernible change in the number of venues following the COVID-19 lockdowns; however, economic data suggest that there has been a decline in revenue. Some venues were identified as having temporarily ceased trading, with these clustered in the Sydney CBD. The findings of this study provide a data-driven approach to assist policymakers and industry bodies in better understanding the spatial implications of policies targeting the hospitality sector and will assist with recovery following the COVID-19 pandemic. Further research utilising similar methods could assess the impacts of further COVID-19 lockdowns as experienced in Sydney in 2021.


Author(s):  
Praphula Jain ◽  
Mani Shankar Bajpai ◽  
Rajendra Pamula

Anomaly detection concerns identifying anomalous observations or patterns that are a deviation from the dataset's expected behaviour. The detection of anomalies has significant and practical applications in several industrial domains such as public health, finance, Information Technology (IT), security, medical, energy, and climate studies. Density-Based Spatial Clustering of Applications with Noise (DBSCAN) Algorithm is a density-based clustering algorithm with the capability of identifying anomalous data. In this paper, a modified DBSCAN algorithm is proposed for anomaly detection in time-series data with seasonality. For experimental evaluation, a monthly temperature dataset was employed and the analysis set forth the advantages of the modified DBSCAN over the standard DBSCAN algorithm for the seasonal datasets. From the result analysis, we may conclude that DBSCAN is used for finding the anomalies in a dataset but fails to find local anomalies in seasonal data. The proposed Modified DBSCAN approach helps to find both the global and local anomalies from the seasonal data. Using normal DBSCAN we are able to get 19 (2.16%) anomaly points. While using the modified approach for DBSCAN we are able to get 42 (4.79%) anomaly points. In comparison we can say that we are able to get 2.11% more anomalies using the modified DBSCAN approach. Hence, the proposed Modified DBSCAN algorithm outperforms in comparison with the DBSCAN algorithm to find local anomalies.


PLoS ONE ◽  
2021 ◽  
Vol 16 (12) ◽  
pp. e0259845
Author(s):  
Yuexiang Yang ◽  
Lei Ren ◽  
Zhihui Du ◽  
Guanqun Tong

Background China’s economy has been transitioning from a phase of rapid growth to high-quality development. The high-quality development of industry is the foundation of a sustainable and healthy growth of national economy, and is of great significance to improve people’s living standards, and to meet people’s needs for a better life. Methods We develop an evaluation index system of high-quality development of industry from the perspectives of industrial benefit, innovation ability, coordination ability, green ability, opening ability and sharing ability. Based on a panel data of 30 provinces in China during 1999–2018, we evaluate the level of high-quality development of industry using the entropy-weight method and Technique for Order Preference by Similarity to an Ideal Solution (TOPSIS) method. Meanwhile we select six specific years and adopt the Natural Breaks method to classify the provinces according to their levels. At last, Moran’s I index is used to analyze the spatial correlation among the provinces. Results Opening ability and innovation ability are found to have greater impacts on industrial high-quality development than other indices, and their influence has been increasing in recent years. There are large spatial and temporal differences among different provinces. Municipalities and coastal provinces are found to be at constantly high levels. The levels in the central region dropped first and then increased, however it was the opposite in the western region. In the northeast region, the levels fluctuated greatly. Overall, the high-quality development of industry among China’s provinces shows positive spatial correlation. Most provinces in China are in High-High and Low-Low clustering States. The High-High clustering type is mainly distributed in the eastern region and the Low-Low clustering type is mainly distributed in the western and central regions. Conclusion (1) Innovation ability and open ability are the most important factors. (2) Green ability has not sufficiently contributed to China’s industrial development. (3) Regional and time evolution differences are significant. (4) There is a significant and stable spatial clustering effect in the high-quality development of industry among China’s provinces.


2021 ◽  
Vol 12 (1) ◽  
pp. 389
Author(s):  
Ernee Sazlinayati Othman ◽  
Ibrahima Faye ◽  
Aarij Mahmood Hussaan

The usage of physiological measures in detecting student’s interest is often said to improve the weakness of psychological measures by decreasing the susceptibility of subjective bias. The existing methods, especially EEG-based, use classification, which needs a predefined class and complex computational to analyze. However, the predefined classes are mostly based on subjective measurement (e.g., questionnaires). This work proposed a new scheme to automatically cluster the students by the level of situational interest (SI) during learning-based lessons on their electroencephalography (EEG) features. The formed clusters are then used as ground truth for classification purposes. A simultaneous recording of EEG was performed on 30 students while attending a lecture in a real classroom. The frontal mean delta and alpha power as well as the frontal alpha asymmetry metric served as the input for k-means and Density-Based Spatial Clustering of Applications with Noise (DBSCAN) clustering algorithms. Using the collected data, 29 models were trained within nine domain classifiers, then the classifiers with the highest performance were selected. We validated all the models through 10-fold cross-validation. The high SI group was clustered to students having lower frontal mean delta and alpha power together with negative Frontal Alpha Asymmetry (FAA). It was found that k-means performed better by giving the maximum performance assessment parameters of 100% in clustering the students into three groups: high SI, medium SI and low SI. The findings show that the DBSCAN had reduced the performance to cluster dataset without the outlier. The findings of this study give a promising option to cluster the students by their SI level, as well as address the drawbacks of the existing methods, which use subjective measures.


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