scholarly journals Remote Sensing and Machine Learning in Crop Phenotyping and Management, with an Emphasis on Applications in Strawberry Farming

2021 ◽  
Vol 13 (3) ◽  
pp. 531
Author(s):  
Caiwang Zheng ◽  
Amr Abd-Elrahman ◽  
Vance Whitaker

Measurement of plant characteristics is still the primary bottleneck in both plant breeding and crop management. Rapid and accurate acquisition of information about large plant populations is critical for monitoring plant health and dissecting the underlying genetic traits. In recent years, high-throughput phenotyping technology has benefitted immensely from both remote sensing and machine learning. Simultaneous use of multiple sensors (e.g., high-resolution RGB, multispectral, hyperspectral, chlorophyll fluorescence, and light detection and ranging (LiDAR)) allows a range of spatial and spectral resolutions depending on the trait in question. Meanwhile, computer vision and machine learning methodology have emerged as powerful tools for extracting useful biological information from image data. Together, these tools allow the evaluation of various morphological, structural, biophysical, and biochemical traits. In this review, we focus on the recent development of phenomics approaches in strawberry farming, particularly those utilizing remote sensing and machine learning, with an eye toward future prospects for strawberries in precision agriculture. The research discussed is broadly categorized according to strawberry traits related to (1) fruit/flower detection, fruit maturity, fruit quality, internal fruit attributes, fruit shape, and yield prediction; (2) leaf and canopy attributes; (3) water stress; and (4) pest and disease detection. Finally, we present a synthesis of the potential research opportunities and directions that could further promote the use of remote sensing and machine learning in strawberry farming.

EDIS ◽  
2018 ◽  
Vol 2018 (6) ◽  
Author(s):  
Yiannis Ampatzidis

Technological advances in computer vision, mechatronics, artificial intelligence and machine learning have enabled the development and implementation of remote sensing technologies for plant/weed/pest/disease identification and management. They provide a unique opportunity for developing intelligent agricultural systems for precision applications. Herein, the Artificial Intelligence (AI) and Machine Learning concepts are described, and several examples are presented to demonstrate the application of the AI in agriculture. Available on EDIS at: https://edis.ifas.ufl.edu/ae529


2013 ◽  
Vol 15 (4) ◽  
pp. 1408-1424 ◽  
Author(s):  
Z. Vojinovic ◽  
Y. A. Abebe ◽  
R. Ranasinghe ◽  
A. Vacher ◽  
P. Martens ◽  
...  

There has been a rapid growth in the field of remote sensing and its various applications in the area of water management. Nowadays, there are several remote sensing techniques that can be used as a source to derive bathymetry data along coastal areas. The key techniques are: sonar (sound navigating and ranging), LiDAR (light detection and ranging) and high-resolution satellite images. The present paper describes a method which was developed and used to create a shallow water bathymetry data along the Dutch side of Sint Maarten Island by combining sonar measurements and satellite images in a nonlinear machine learning technique. The purpose of this work is to develop a bathymetry dataset that can be used to set up physically-based models for coastal flood modelling work. The nonlinear machine learning technique used in the work is a support vector machine (SVM) model. The sonar data were used as an output whereas image data were used as an input into the SVM model. The results were analysed for three depth ranges and the findings are promising. It remains to further verify the capacity of the new method on a dataset with higher resolution satellite imagery.


Author(s):  
Anna Paola Carrieri ◽  
Will PM Rowe ◽  
Martyn Winn ◽  
Edward O. Pyzer-Knapp

Research on the microbiome is an emerging and crucial science that finds many applications in healthcare, food safety, precision agriculture and environmental studies. Huge amounts of DNA from microbial communities are being sequenced and analyzed by scientists interested in extracting meaningful biological information from this big data. Analyzing massive microbiome sequencing datasets, which embed the functions and interactions of thousands of different bacterial, fungal and viral species, is a significant computational challenge. Artificial intelligence has the potential for building predictive models that can provide insights for specific cutting edge applications such as guiding diagnostics and developing personalised treatments, as well as maintaining soil health and fertility. Current machine learning workflows that predict traits of host organisms from their commensal microbiome do not take into account the whole genetic material constituting the microbiome, instead basing the analysis on specific marker genes. In this paper, to the best of our knowledge, we introduce the first machine learning workflow that efficiently performs host phenotype prediction from whole shotgun metagenomes by computing similaritypreserving compact representations of the genetic material. Our workflow enables prediction tasks, such as classification and regression, from Terabytes of raw sequencing data that do not necessitate any pre-prossessing through expensive bioinformatics pipelines. We compare the performance in terms of time, accuracy and uncertainty of predictions for four different classifiers. More precisely, we demonstrate that our ML workflow can efficiently classify real data with high accuracy, using examples from dog and human metagenomic studies, representing a step forward towards real time diagnostics and a potential for cloud applications.


Informatica ◽  
2021 ◽  
Vol 45 (3) ◽  
Author(s):  
Biserka Petrovska ◽  
Tatjana Atanasova Pacemska ◽  
Natasa Stojkovik ◽  
Aleksandra Stojanova ◽  
Mirjana Kocaleva

Author(s):  
Yekta Can Yildirim ◽  
Mustafa Yeniad

Agricultural monitoring and analysis of data to be used in management decisions to increase the quality, profitability, sufficiency, continuity and efficiency of agricultural production is called Precision Agriculture.[1]Precision Agriculture technologies aim to help the farmers with the decision making process by providing them information and control over their land, crop status and environment using remote sensing systems. Remote sensing systems use multispectral cameras to gather information, which filter different wavelengths of light in separate bands. Vegetation indices derived from the spectral bands of the remote sensing systems carry useful information about crop characteristics such as nitrogen content, chlorophyll content and water stress which supports the farmers to plan irrigation and pesticide spraying processes without the need of manual examination, providing a cost and time-efficient solution. This study aims to explore three specific Precision Agriculture applications, such as crop segmentation, illness detection and yield prediction on olive trees in Manisa, Turkey by using machine learning algorithms. Using the spectral band information gathered from an Orange-Cyan-NIR (OCN) camera embedded UAV system, vegetation health index was calculated and the data was preprocessed by segmentating the tree pixels from background based on those values using MiniBatchKMeans algorithm. Optimal features were selected based on accuracy comparison for yield and disease predictions. A Decision Tree Regressor (DTR) model was trained for yield prediction while a Random Forest Classifier (RFC) model was trained for disease prediction. The results showed that crop segmentation had an accuracy rate of 0.85-0.95, while DTR and RFC models had an R2 score of 0.99 and accuracy rate of 0.98 respectively, which displayed the importance and usefulness of vegetation indices.


Author(s):  
Aliyu Muhammad Abdu ◽  
Musa Mohd Muhammad Mokji ◽  
Usman Ullah Ullah Sheikh

Image-based plant disease detection is among the essential activities in precision agriculture for observing incidence and measuring the severity of variability in crops. 70% to 80% of the variabilities are attributed to diseases caused by pathogens, and 60% to 70% appear on the leaves in comparison to the stem and fruits. This work provides a comparative analysis through the model implementation of the two renowned machine learning models, the support vector machine (SVM) and deep learning (DL), for plant disease detection using leaf image data. Until recently, most of these image processing techniques had been, and some still are, exploiting what some considered as "shallow" machine learning architectures. The DL network is fast becoming the benchmark for research in the field of image recognition and pattern analysis. Regardless, there is a lack of studies concerning its application in plant leaves disease detection. Thus, both models have been implemented in this research on a large plant leaf disease image dataset using standard settings and in consideration of the three crucial factors of architecture, computational power, and amount of training data to compare the duos. Results obtained indicated scenarios by which each model best performs in this context, and within a particular domain of factors suggests improvements and which model would be more preferred. It is also envisaged that this research would provide meaningful insight into the critical current and future role of machine learning in food security


Author(s):  
Sumit Kaur

Abstract- Deep learning is an emerging research area in machine learning and pattern recognition field which has been presented with the goal of drawing Machine Learning nearer to one of its unique objectives, Artificial Intelligence. It tries to mimic the human brain, which is capable of processing and learning from the complex input data and solving different kinds of complicated tasks well. Deep learning (DL) basically based on a set of supervised and unsupervised algorithms that attempt to model higher level abstractions in data and make it self-learning for hierarchical representation for classification. In the recent years, it has attracted much attention due to its state-of-the-art performance in diverse areas like object perception, speech recognition, computer vision, collaborative filtering and natural language processing. This paper will present a survey on different deep learning techniques for remote sensing image classification. 


2014 ◽  
Vol 13 (1) ◽  
Author(s):  
Jan Piekarczyk

AbstractWith increasing intensity of agricultural crop production increases the need to obtain information about environmental conditions in which this production takes place. Remote sensing methods, including satellite images, airborne photographs and ground-based spectral measurements can greatly simplify the monitoring of crop development and decision-making to optimize inputs on agricultural production and reduce its harmful effects on the environment. One of the earliest uses of remote sensing in agriculture is crop identification and their acreage estimation. Satellite data acquired for this purpose are necessary to ensure food security and the proper functioning of agricultural markets at national and global scales. Due to strong relationship between plant bio-physical parameters and the amount of electromagnetic radiation reflected (in certain ranges of the spectrum) from plants and then registered by sensors it is possible to predict crop yields. Other applications of remote sensing are intensively developed in the framework of so-called precision agriculture, in small spatial scales including individual fields. Data from ground-based measurements as well as from airborne or satellite images are used to develop yield and soil maps which can be used to determine the doses of irrigation and fertilization and to take decisions on the use of pesticides.


2019 ◽  
Vol 11 (10) ◽  
pp. 1157 ◽  
Author(s):  
Jorge Fuentes-Pacheco ◽  
Juan Torres-Olivares ◽  
Edgar Roman-Rangel ◽  
Salvador Cervantes ◽  
Porfirio Juarez-Lopez ◽  
...  

Crop segmentation is an important task in Precision Agriculture, where the use of aerial robots with an on-board camera has contributed to the development of new solution alternatives. We address the problem of fig plant segmentation in top-view RGB (Red-Green-Blue) images of a crop grown under open-field difficult circumstances of complex lighting conditions and non-ideal crop maintenance practices defined by local farmers. We present a Convolutional Neural Network (CNN) with an encoder-decoder architecture that classifies each pixel as crop or non-crop using only raw colour images as input. Our approach achieves a mean accuracy of 93.85% despite the complexity of the background and a highly variable visual appearance of the leaves. We make available our CNN code to the research community, as well as the aerial image data set and a hand-made ground truth segmentation with pixel precision to facilitate the comparison among different algorithms.


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