scholarly journals Diverse Arbuscular Mycorrhizal Fungi (AMF) Communities Colonize Plants Inhabiting a Constructed Wetland for Wastewater Treatment

Water ◽  
2019 ◽  
Vol 11 (8) ◽  
pp. 1535 ◽  
Author(s):  
Cristina S. C. Calheiros ◽  
Sofia I.A. Pereira ◽  
Albina R. Franco ◽  
Paula M. L. Castro
Keyword(s):  
Wastewater Treatment ◽  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Denaturing Gradient Gel Electrophoresis ◽  
Arbuscular Mycorrhizal ◽  
Sampling Period ◽  
18S Rrna Gene ◽  
Rrna Gene ◽  
Amf Communities

Constructed wetlands (CWs) are biological wastewater treatment systems that comprise several components where plants and associated organisms play an important role in water depuration. Microbial studies emphasize bacterial dynamics, whereas studies of arbuscular mycorrhizal fungi (AMF) are scarce and the functional role of AMF in aquatic and wetland plants is poorly understood. The aim of this study was to analyze the AMF communities colonizing the roots of Canna indica, Canna flaccida, and Watsonia borbonica inhabiting a CW treating wastewater of a tourism unit. The dynamics of the AMF communities were evaluated by Denaturing Gradient Gel Electrophoresis (DGGE) of 18S rRNA gene amplification products along cold (C) and hot (H) seasons for three consecutive years. DGGE profiles allowed the estimation of AMF species richness (S), and Shannon-Wienner (H) and Pielou (J) indexes, for the different plant species, showing differences between species and along the years. Excised bands from DGGE were analyzed and identified through sequencing for arbuscular mycorrhiza, revealing the presence of AMF strains closely related to Glomus sp., Rhizophagus sp. and Acaulospora sp. genera. Concomitant water quality analyses showed that the system was effective in organic and nutrient removal during the sampling period. Findings from this study suggest that AMF diversity found in the CW is influenced by the water constituents, season, and plant species.

scholarly journals PCR-Denaturing Gradient Gel Electrophoresis Profiling of Inter- and Intraspecies 18S rRNA Gene Sequence Heterogeneity Is an Accurate and Sensitive Method To Assess Species Diversity of Arbuscular Mycorrhizal Fungi of the Genus Gigaspora

2004 ◽  
Vol 70 (3) ◽  
pp. 1413-1424 ◽  
Author(s):  
Francisco A. de Souza ◽  
George A. Kowalchuk ◽  
Paula Leeflang ◽  
Johannes A. van Veen ◽  
Eric Smit
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Mycorrhizal Fungi ◽  
Gel Electrophoresis ◽  
18S Rrna ◽  
Denaturing Gradient Gel Electrophoresis ◽  
Arbuscular Mycorrhizal ◽  
18S Rrna Gene ◽  
Rrna Genes ◽  
Rrna Gene ◽  
Gradient Gel Electrophoresis

ABSTRACT Despite the importance of arbuscular mycorrhizal fungi in the majority of terrestrial ecosystems, their ecology, genetics, and evolution are poorly understood, partly due to difficulties associated with detecting and identifying species. We explored the inter- and intraspecies variations of the 18S rRNA genes of the genus Gigaspora to assess the use of this marker for the discrimination of Gigaspora isolates and of Gigasporaceae populations from environmental samples. Screening of 48 Gigaspora isolates by PCR-denaturing gradient gel electrophoresis (DGGE) revealed that the V3-V4 region of the 18S rRNA gene contained insufficient variation to discriminate between different Gigaspora species. In contrast, the patterns of 18S ribosomal DNA (rDNA) heterogeneity within the V9 region of this marker could be used for reliable identification of all recognized species within this genus. PCR-DGGE patterns provided insight into some putative misidentifications and could be used to differentiate geographic isolates of G. albida, G. gigantea, and G. margarita but not G. rosea. Two major clusters were apparent based upon PCR-DGGE ribotype patterns, one containing G. albida, G. candida, G. ramisporophora, and G. rosea and the other containing G. decipiens and G. margarita. Dissection of the DGGE patterns by cloning, DGGE screening, and sequencing confirmed these groupings and revealed that some ribotypes were shared across species boundaries. Of the 48 isolates examined, only two displayed any spore-to-spore variation, and these exceptions may be indicative of coisolation of more than one species or subspecies within these cultures. Two Brazilian agricultural soils were also analyzed with a Gigasporaceae-specific nested PCR approach, revealing a dominance of G. margarita within this family.

scholarly journals Phylogenetic Correlation and Symbiotic Network Explain the Interdependence Between Plants and Arbuscular Mycorrhizal Fungi in a Tibetan Alpine Meadow

2021 ◽  
Vol 12 ◽  
Author(s):  
Qiang Dong ◽  
Xin Guo ◽  
Keyu Chen ◽  
Shijie Ren ◽  
Muhammad Atif Muneer ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Host Plants ◽  
Alpine Meadow ◽  
Phylogenetic Signal ◽  
Arbuscular Mycorrhizal ◽  
Rrna Gene ◽  
Form Complex ◽  
Alpine Meadows

Plants and arbuscular mycorrhizal fungi (AMF) can form complex symbiotic networks based on functional trait selection, contributing to the maintenance of ecosystem biodiversity and stability. However, the selectivity of host plants on AMF and the characteristics of plant-AMF networks remain unclear in Tibetan alpine meadows. In this study, we studied the AMF communities in 69 root samples from 23 plant species in a Tibetan alpine meadow using Illumina-MiSeq sequencing of the 18S rRNA gene. The results showed a significant positive correlation between the phylogenetic distances of plant species and the taxonomic dissimilarity of their AMF community. The plant-AMF network was characterized by high connectance, high nestedness, anti-modularity, and anti-specialization, and the phylogenetic signal from plants was stronger than that from AMF. The high connected and nested plant-AMF network potentially promoted the interdependence and stability of the plant-AMF symbioses in Tibetan alpine meadows. This study emphasizes that plant phylogeny and plant-AMF networks play an important role in the coevolution of host plants and their mycorrhizal partners and enhance our understanding of the interactions between aboveground and belowground communities.

scholarly journals Plant health status effects on arbuscular mycorrhizal fungi associated with Lavandula angustifolia and Lavandula intermedia infected by Phytoplasma in France

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Marie- Noëlle Binet ◽  
Camille Marchal ◽  
Justine Lipuma ◽  
Roberto A. Geremia ◽  
Olivier Bagarri ◽  
...  
Keyword(s):  
Health Status ◽  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Agricultural Practices ◽  
Arbuscular Mycorrhizal ◽  
Plant Health ◽  
Agricultural Practice ◽  
Lavandula Angustifolia ◽  
Amf Communities

AbstractWe investigated root communities of arbuscular mycorrhizal fungi (AMF) in relation to lavender (Lavandula angustifolia) and lavandin (Lavandula intermedia) health status from organic and conventional fields affected by Phytoplasma infection. The intensity of root mycorrhizal colonization was significantly different between diseased and healthy plants and was higher in the latter regardless of agricultural practice. This difference was more pronounced in lavender. The root AMF diversity was influenced by the plant health status solely in lavender and only under the conventional practice resulting in an increase in the AMF abundance and richness. The plant health status did not influence the distribution of root AMF communities in lavandin unlike its strong impact in lavender in both agricultural practices. Finally, among the most abundant molecular operational taxonomic units (MOTUs), four different MOTUs for each plant species were significantly abundant in the roots of healthy lavender and lavandin in either agricultural practice. Our study demonstrated that the plant health status influences root colonization and can influence the diversity and distribution of root AMF communities. Its effects vary according to plant species, can be modified by agricultural practices and allow plants to establish symbiosis with specific AMF species.

scholarly journals Precipitation shapes communities of arbuscular mycorrhizal fungi in Tibetan alpine steppe

2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Jing Zhang ◽  
Fang Wang ◽  
Rongxiao Che ◽  
Ping Wang ◽  
Hanke Liu ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Environmental Changes ◽  
Regional Scale ◽  
Arbuscular Mycorrhizal ◽  
Future Climate Change ◽  
Alpine Steppe ◽  
Amf Communities

Abstract Tibetan Plateau is one of the largest and most unique habitats for organisms including arbuscular mycorrhizal fungi (AMF). However, it remains unclear how AMF communities respond to key environmental changes in this harsh environment. To test if precipitation could be a driving force in shaping AMF community structures at regional scale, we examined AMF communities associated with dominant plant species along a precipitation gradient in Tibetan alpine steppe. Rhizosphere soils were collected from five sites with annual precipitation decreasing from 400 to 50 mm. A total of 31 AMF operational taxonomic units (OTUs) were identified. AMF community composition varied significantly among sites, whereas AMF community composition did not vary among plant species. Path analysis revealed that precipitation directly affected AMF hyphal length density, and indirectly influenced AMF species richness likely through the mediation of plant coverage. Our results suggested that water availability could drive the changes of AMF communities at regional scale. Given the important roles AMF could play in the dynamics of plant communities, exploring the changes of AMF communities along key environmental gradients would help us better predict the ecosystem level responses of the Tibetan vegetation to future climate change.

scholarly journals Diverse and abundant arbuscular mycorrhizal fungi in ecological floating beds used to treat eutrophic water

2021 ◽  
Author(s):  
Zhouying Xu ◽  
Yichao Lv ◽  
Yinghe Jiang ◽  
Xiaodong Luo ◽  
Xuelin Gui ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Community Composition ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Aquatic Ecosystems ◽  
Species Abundance ◽  
Arbuscular Mycorrhizal ◽  
Eutrophic Lakes ◽  
Amf Diversity ◽  
Amf Communities

Abstract An increasing number of investigations have demonstrated the universal existence of arbuscular mycorrhizal fungi (AMF) in aquatic ecosystems. However, little is known about the accurate distribution and functions of AMF inhabiting aquatic ecosystems, especially ecological floating bed (EFB) which was constructed for the remediation of polluted waterbodies.In this study, we collected root samples of Canna generalis, Cyperus alternifolius and Eichhornia crassipes from three EFBs floating on two eutrophic lakes in Wuhan, China, to investigate the resources and distribution of AMF in EFBs using Illumina Mi-seq technology. A total of 229 operational taxonomic units (OTUs) and 21 taxon from 348,799 Glomeromycota sequences were detected. Glomus was the most dominant AMF in the three EFBs while the second dominant AMF was related to Acaulospora. Different aquatic plant species exhibited varying degrees of AMF colonization (3.83%~71%), diversity (6~103 OTUs, 3~15 virtual taxa) and abundance (14~57551 sequences). Low AMF abundance but relatively high AMF diversity were found in C. alternifolius which is usually considered as non-mycorrhizal, demonstrating the high accuracy of Illumina sequencing. In addition, results from this study suggested a lognormal species abundance distribution was observed across AMF taxa in the three plant species, and the AMF community composition was closely related to pH, nitrogen and phosphorus.Overall, our data demonstrated that diverse and abundant AMF communities were living in EFBs, and the AMF community composition was closely related to the water quality of eutrophic lakes treated by EFBs, providing potential possibility for the applications of AMF in plant-based bioremediation of wastewater.

scholarly journals The methylome of the model arbuscular mycorrhizal fungus, Rhizophagus irregularis, shares characteristics with early diverging fungi and Dikarya

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Anurag Chaturvedi ◽  
Joaquim Cruz Corella ◽  
Chanz Robbins ◽  
Anita Loha ◽  
Laure Menin ◽  
...  
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal Fungus ◽  
Mycorrhizal Fungus ◽  
Arbuscular Mycorrhizal ◽  
Rhizophagus Irregularis ◽  
Functional Differences ◽  
Phosphate Regulation ◽  
Very High

AbstractEarly-diverging fungi (EDF) are distinct from Dikarya and other eukaryotes, exhibiting high N6-methyldeoxyadenine (6mA) contents, rather than 5-methylcytosine (5mC). As plants transitioned to land the EDF sub-phylum, arbuscular mycorrhizal fungi (AMF; Glomeromycotina) evolved a symbiotic lifestyle with 80% of plant species worldwide. Here we show that these fungi exhibit 5mC and 6mA methylation characteristics that jointly set them apart from other fungi. The model AMF, R. irregularis, evolved very high levels of 5mC and greatly reduced levels of 6mA. However, unlike the Dikarya, 6mA in AMF occurs at symmetrical ApT motifs in genes and is associated with their transcription. 6mA is heterogeneously distributed among nuclei in these coenocytic fungi suggesting functional differences among nuclei. While far fewer genes are regulated by 6mA in the AMF genome than in EDF, most strikingly, 6mA methylation has been specifically retained in genes implicated in components of phosphate regulation; the quintessential hallmark defining this globally important symbiosis.

Interspecific differences in the tolerance of arbuscular mycorrhizal fungi to freezing and drying

2001 ◽  
Vol 79 (10) ◽  
pp. 1161-1166 ◽  
Author(s):  
John N Klironomos ◽  
Miranda M Hart ◽  
Jane E Gurney ◽  
Peter Moutoglis
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Plant Species ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Fungal Species ◽  
Drought Treatment ◽  
Interspecific Differences ◽  
The Difference ◽  
One Year ◽  
Arbuscular Mycorrhizal Fungal

Arbuscular mycorrhizal fungal communities in northern temperate ecosystems must function during extremes in environmental conditions. However, it is not known if arbuscular mycorrhizal fungi that co-exist in soil communities have similar tolerances to stresses such as drought and freezing. The phenology of arbuscular mycorrhizal fungi was determined over one year in a community in southern Ontario, Canada. Five fungal species from the same community were then used to inoculate five plant species, in all possible combinations, and were subjected to either a freezing treatment or a drought treatment after which new seedlings were transplanted into the treated pots. The percent colonization of roots of each plant species was measured as the difference in mean colonization from the control. Freezing reduced percent colonization in almost every case, whereas drought resulted in both increased and decreased percent colonization. Fungal species responded differently to the treatments, and there was a pronounced plant × fungus effect. These results support the hypothesis that distinct functional groups of arbuscular mycorrhizal fungi exist, and these may determine plant community structure.Key words: arbuscular mycorrhizal fungi, freezing, drying, functional diversity.

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