Faculty Opinions recommendation of A cis-acting bidirectional transcription switch controls sexual dimorphism in the liverwort.

Author(s):  
Abdelhafid Bendahmane ◽  
Adnane Boualem
2019 ◽  
Vol 38 (6) ◽  
Author(s):  
Tetsuya Hisanaga ◽  
Keitaro Okahashi ◽  
Shohei Yamaoka ◽  
Tomoaki Kajiwara ◽  
Ryuichi Nishihama ◽  
...  

2020 ◽  
Author(s):  
Stevie A. Bain ◽  
Hollie Marshall ◽  
Laura Ross

AbstractSexual dimorphism is exhibited in many species across the tree of life with many phenotypic differences mediated by differential expression and alternative splicing of genes present in both sexes. However, the mechanisms that regulate these sex-specific expression and splicing patterns remain poorly understood. The mealybug, Planococcus citri, displays extreme sexual dimorphism and exhibits an unusual instance of sex-specific genomic imprinting, Paternal Genome Elimination (PGE), in which the paternal chromosomes in males are highly condensed and eliminated from the sperm. P. citri also has no sex chromosomes and as such both sexual dimorphism and PGE are predicted to be under epigenetic control. We recently showed that P. citri females display a highly unusual DNA methylation profile for an insect species, with the presence of promoter methylation associated with lower levels of gene expression. In this study we therefore decided to explore genome-wide differences in DNA methylation between male and female P. citri using whole genome bisulfite sequencing. We have identified extreme differences in genome-wide levels and patterns between the sexes. Males display overall higher levels of DNA methylation which manifests as more uniform low-levels across the genome. Whereas females display more targeted high levels of methylation. We suggest these unique sex-specific differences are due to chromosomal differences caused by PGE and may be linked to possible ploidy compensation. Using RNA-Seq we identified extensive sex-specific gene expression and alternative splicing. We found cis-acting DNA methylation is not directly associated with differentially expressed or differentially spliced genes, indicating a broader role for chromosome-wide trans-acting DNA methylation in this species.


2006 ◽  
Vol 5 (7) ◽  
pp. 1104-1110 ◽  
Author(s):  
Shigenori Hirose ◽  
Samuel H. Payne ◽  
William F. Loomis

ABSTRACT A pair of adjacent genes, impA and dia1, are divergently transcribed but expressed at different stages in the life cycle of Dictyostelium discoideum. The intervening 654-bp region carries cis-acting regions that are essential for transcription in both directions as well as repression of dia1 in growing cells. We have focused on a 112-bp region proximal to dia1 that is essential for bidirectional transcription. Analyses of a set of internal deletions showed that the sequence between positions 80 and 97 (TTTGAATTTTTTGAATTT) is critical and that bases outside this region are dispensable. Site-directed mutations within this critical region confirmed the importance of this sequence for transcription both to the right and to the left. However, insertions of either 6 or 24 Ts into the run of 6 Ts separating the repeated GAA sequence had little effect on the functioning of the site in either direction, suggesting that factors recognize the half-sites TTGAATT separately. Inversion of the bases between positions 80 and 97 greatly reduced expression in both directions, indicating that orientation is critical for expression of both the nearby impA gene and the distal dia1 gene, which is more than 500 bp away. Comparison of 38 mutant constructs with multiple random variations in the region indicated that transcription factors may bind to a range of related sequences and still retain function. All functional constructs directed transcription both leftward and rightward, while all nonfunctional constructs were impaired for transcription in both directions. It appears that the same transcription complex controls transcription of both impA and dia1.


Author(s):  
I. R. Khuzina ◽  
V. N. Komarov

The paper considers a point of view, based on the conception of the broad understanding of taxons. According to this point of view, rhyncholites of the subgenus Dentatobeccus and Microbeccus are accepted to be synonymous with the genus Rhynchoteuthis, and subgenus Romanovichella is considered to be synonymous with the genus Palaeoteuthis. The criteria, exercising influence on the different approaches to the classification of rhyncholites, have been analyzed (such as age and individual variability, sexual dimorphism, pathological and teratological features, degree of disintegration of material), underestimation of which can lead to inaccuracy. Divestment of the subgenuses Dentatobeccus, Microbeccus and Romanovichella, possessing very bright morphological characteristics, to have an independent status and denomination to their synonyms, has been noted to be unjustified. An artificial system (any suggested variant) with all its minuses is a single probable system for rhyncholites. The main criteria, minimizing its negative sides and proving the separation of the new taxon, is an available mass-scale material. The narrow understanding of the genus, used in sensible limits, has been underlined to simplify the problem of the passing the view about the genus to the other investigators and recognition of rhyncholites for the practical tasks.


2017 ◽  
Vol 17 (1) ◽  
pp. 25-32
Author(s):  
Jacinta Lalchhanhimi ◽  
Lalremsanga H.T.

The breeding biology of tree frog, Polypedates teraiensis was studied during the breeding season at Mizoram University Campus. It was found that sound production by male during the breeding season was primarily a reproductive function and advertisement calls attract females to the breeding areas and announce other males that a given territory is occupied. The aim of this study was to provide the detailed information on the breeding behaviour and the advertisement calls of Polypedates teraiensis. The morphometric measurements of the amplecting pairs (males and females) for sexual dimorphism along with clutch sizes were also studied.


2019 ◽  
Author(s):  
Marcia Hiriart ◽  
Myrian Velasco ◽  
Marcia Hiriart

2018 ◽  
Vol 14 (1) ◽  
pp. 10-24
Author(s):  
V. N. Fursov ◽  
L. S. Cherney

Darkling beetle Zophobas atratus (Coleoptera, Tenebrionidae) is recorded here for the first time as a new species for the fauna of Ukraine. Detailed study on morphology of preimaginal stages and biology of this species recently introduced to Ukraine, is given here. Zophobas atratus is an important species being easily reared in laboratory cultures and widely distributed in North and South America, Europe, and Asia. Detailed descriptions of all life stages, including egg, young and older larvae, pupa and adult of Z. atratus are required for further taxonomical study of the genus Zophobas, which isn’t yet definitively established. New identification keys for adults and larvae of the genera of tribe Tenebrionini are presented here, based on a comparative analysis of the taxonomic characters of adults and larvae of Z. atratus and species from the genera Tenebrio and Neatus. Comparative analysis of morphology of larva of Z. atratus and larvae of the tribe Cteniopodini of close subfamily Alleculinae was conducted here. The subfamily Alleculinae previously had the rank of family Alleculidae, but our analysis confirmed the reliability of its current taxonomic position as subfamily. The study of morphology of larvae of 1st and 2nd instars of Z. atratus revealed that they are characterized by special taxonomic structures that are not characteristic for oldest instars of larvae of Z. atratus. These characters include absence of spines on caudal segment, presence of a set of 4 setae at posterior margin of tergites of prothorax, metathorax, and 1st to 8th abdominal segments, strongly convex 2nd antennal segment and sensory zone in the form of an open ring on its apex, and etc. Moreover, structure of antenna of larvae of Z. atratus is similar to that of oldest larvae of most species of darkling beetles of the fauna of Ukraine. The most distinctive features of Z. atratus are: sexual dimorphism in structure of clypeus of adults; filiform sclerotized antenna of larva with a continuous sensory zone at apex of 2nd segment, weakly developed 3rd segment; fusion of sclerotized pleurites of 1st–8th abdominal segments with their tergites; sexual dimorphism in structure of 9th abdominal segment of pupa, and presence of two hooks on apex of its appendages. The data of original study of features of life cycle of Z. atratus are given. The pictures and photos of details of morphology of egg, larvae, pupa and adult of Z. atratus are presented. It was recored that life cycle of Z. atratus from laying of egg to the emergence of adult continues from 169 up to 181 days. Adults lived maximum up to 206 days. Maturation of eggs in female after copulation continues 10-11 days. Stage of egg continues 7 days, larva – up to 151 days, including pre-pupal period from 6 to 22 days, pupa – from 8 to 21 days. Twelve larval stages of Z. atratus were recorded in laboratory culture.


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