Resistance of Vitis adenoclada Hand.–Mazz. and Vitis davidii Foëx to Sphaceloma ampelinum and Plasmopara viticola

2014 ◽  
Vol 39 (1) ◽  
pp. 46-51 ◽  
Author(s):  
Kun-yu LIU ◽  
Fang FANG ◽  
Xue-hui SHI ◽  
Guo-shun YANG ◽  
Xiao-hong ZHONG ◽  
...  
Plant Disease ◽  
2021 ◽  
Author(s):  
Bora Kim ◽  
Jae Sung Lee ◽  
Young-Joon Choi

Vitis davidii (Rom.Caill.) Foëx, commonly known as spine grape, is a deciduous climber native to China. Its fruits are consumed fresh or used to make wine in South and Central China. In recent years, spine grape has been cultivated in Korea. In July 2020, downy mildew was detected on spine grape vines in Jeongeup (35°42′17″N, 126°54′02″E), Korea, with a disease incidence of 70%. The symptoms appeared as yellowish, brownish, or reddish, vein-limited, poly-angular adaxial leaf spots, correspond to dense, white downy growth abaxially. A representative specimen was deposited in the Kunsan National University Herbarium (KSNUH679). Sporangiophores were tree-like, hyaline, mostly straight, and monopodially branched in orders of three to six; they measured (219.4–)273.2 to 435.1(–546.6) × (4.8–)6.7 to 9.0(–10.0) μm (n = 50). Ultimate branchlets were bi or trifurcate, straight to slightly curved, with truncate or, rarely, a swollen tip and measured 2.9 to 9.7 μm long and 0.8 to 2.5 μm wide at the base (n = 50). Sporangia were hyaline, ovoidal or lemon-shaped; they measured (16.8–)20.0 to 28.8(–34.2) × (11.4–)13.1 to 17.0(–20.1) μm with a length to width ratio of (1.28–)1.46 to 1.78(–2.07) (n = 50). This morphology was as described for Plasmopara viticola (Berk. & M. A. Curtis) Berl. & De Toni (Hall, 1989). Genomic DNA was extracted directly from infected V. davidii leaves. Three regions were PCR-amplified and sequenced: cox2 mtDNA with primers cox2F and cox2-RC4 (Choi et al., 2015), actin with primers pve04815-F and pve04815-R, and beta-tubulin with primers pvc389-F3 and pvc389-R4 (Rouxel et al., 2013). The resulting sequences were deposited in GenBank (accession nos. MT834527 for cox2, MT834525 for actin, and MT834526 for beta-tubulin). A BLASTn search revealed that the Korean sample was identical to P. viticola clade aestivalis originating from Vitis species: MK215072 for cox2 sequence, KY933800 for actin, and MK358393 for beta-tubulin. In all phylogenetic analyses of the three genes (cox2, actin, and beta-tubulin), KSNUH679 came out as phylogenetically place within P. viticola clade aestivalis, which has recently been reported on V. coignetiae and V. ficifolia var. sinuata in Korea (Kim et al., 2019). A pathogenicity test was performed twice by inoculating the leaves of 10 healthy spine grape plants with a sporangial suspension (~1 × 106 sporangia·mL-1) and incubating them in a growth chamber at 25 °C, 12-h day/night cycle, and 90% relative humidity; five non-inoculated plants served as controls. After two weeks, all inoculated plants developed typical downy mildew symptoms could be observed, whereas the controls remained symptomless. Morphology and molecular features confirmed the identity of the pathogen of spine grape to be P. viticola. To the best of our knowledge, this is the first report of downy mildew caused by P. viticola on V. davidii in Korea. Recently, downy mildew outbreaks caused by P. viticola have been recorded in spine grape plantations in southern China (Yi et al., 2019). Considering the potential of spine grape as a novel crop for Korea, P. viticola appears to represent a significant threat to this industry.


2013 ◽  
Vol 12 (4) ◽  
pp. 6752-6761 ◽  
Author(s):  
O. Poolsawat ◽  
S. Mahanil ◽  
P. Laosuwan ◽  
S. Wongkaew ◽  
A. Tharapreuksapong ◽  
...  

2009 ◽  
Vol 26 (Special Issue) ◽  
pp. S13-S17 ◽  
Author(s):  
P. Bábíková ◽  
N. Vrchotová ◽  
J. Tříska ◽  
M. Kyseláková

The aim of this project was to study changes in the content of <i>trans</i>-resveratrol in berries and leaves of grapevine (<i>Vitis</i> sp.) infested by fungal diseases, especially by <i>Botryotinia fuckeliana</i> Whetzel, called as grey mildew, <i>Plasmopara viticola</i> (Berk. & M.A. Curtis) Berl & De Toni, called downy mildew and <i>Uncinula necator</i> (Schw.) Burr, called powdery mildew. In our experiments two white and two blue varieties were used. Contents of <i>trans</i>-resveratrol were determined in healthy and infested leaves and in healthy berries. Infested leaves of white varieties contained more <i>trans</i>-resveratrol than those of blue varieties. The content of <i>trans</i>-resveratrol in berries was lower than that in leaves.


Author(s):  
Noé Cochetel ◽  
Andrea Minio ◽  
Mélanie Massonnet ◽  
Amanda M Vondras ◽  
Rosa Figueroa-Balderas ◽  
...  

Abstract Muscadinia rotundifolia, the muscadine grape, has been cultivated for centuries in the southeastern United States. M. rotundifolia is resistant to many of the pathogens that detrimentally affect Vitis vinifera, the grape species commonly used for winemaking. For this reason, M. rotundifolia is a valuable genetic resource for breeding. Single-molecule real-time reads were combined with optical maps to reconstruct the two haplotypes of each of the 20 M. rotundifolia cv. Trayshed chromosomes. The completeness and accuracy of the assembly were confirmed using a high-density linkage map of M. rotundifolia. Protein-coding genes were annotated using an integrated and comprehensive approach. This included using Full-length cDNA sequencing (Iso-Seq) to improve gene structure and hypothetical spliced variant predictions. Our data strongly support that Muscadinia chromosomes 7 and 20 are fused in Vitis and pinpoint the location of the fusion in Cabernet Sauvignon and PN40024 chromosome 7. Disease-related gene numbers in Trayshed and Cabernet Sauvignon were similar, but their clustering locations were different. A dramatic expansion of the Toll/Interleukin-1 Receptor-like Nucleotide-Binding Site Leucine-Rich Repeat (TIR-NBS-LRR) class was detected on Trayshed chromosome 12 at the Resistance to Uncinula necator 1 (RUN1)/ Resistance to Plasmopara viticola 1 (RPV1) locus, which confers strong dominant resistance to powdery and downy mildews. A genome browser for Trayshed, its annotation, and an associated Blast tool are available at .www.grapegenomics.com


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Garima Bhatia ◽  
Santosh K. Upadhyay ◽  
Anuradha Upadhyay ◽  
Kashmir Singh

Abstract Background Long non-coding RNAs (lncRNAs) are regulatory transcripts of length > 200 nt. Owing to the rapidly progressing RNA-sequencing technologies, lncRNAs are emerging as considerable nodes in the plant antifungal defense networks. Therefore, we investigated their role in Vitis vinifera (grapevine) in response to obligate biotrophic fungal phytopathogens, Erysiphe necator (powdery mildew, PM) and Plasmopara viticola (downy mildew, DM), which impose huge agro-economic burden on grape-growers worldwide. Results Using computational approach based on RNA-seq data, 71 PM- and 83 DM-responsive V. vinifera lncRNAs were identified and comprehensively examined for their putative functional roles in plant defense response. V. vinifera protein coding sequences (CDS) were also profiled based on expression levels, and 1037 PM-responsive and 670 DM-responsive CDS were identified. Next, co-expression analysis-based functional annotation revealed their association with gene ontology (GO) terms for ‘response to stress’, ‘response to biotic stimulus’, ‘immune system process’, etc. Further investigation based on analysis of domains, enzyme classification, pathways enrichment, transcription factors (TFs), interactions with microRNAs (miRNAs), and real-time quantitative PCR of lncRNAs and co-expressing CDS pairs suggested their involvement in modulation of basal and specific defense responses such as: Ca2+-dependent signaling, cell wall reinforcement, reactive oxygen species metabolism, pathogenesis related proteins accumulation, phytohormonal signal transduction, and secondary metabolism. Conclusions Overall, the identified lncRNAs provide insights into the underlying intricacy of grapevine transcriptional reprogramming/post-transcriptional regulation to delay or seize the living cell-dependent pathogen growth. Therefore, in addition to defense-responsive genes such as TFs, the identified lncRNAs can be further examined and leveraged to candidates for biotechnological improvement/breeding to enhance fungal stress resistance in this susceptible fruit crop of economic and nutritional importance.


2021 ◽  
Vol 22 (2) ◽  
pp. 940
Author(s):  
Elodie Vandelle ◽  
Pietro Ariani ◽  
Alice Regaiolo ◽  
Davide Danzi ◽  
Arianna Lovato ◽  
...  

Downy mildew, caused by Plasmopara viticola, is one of the most severe diseases of grapevine (Vitis vinifera L.). Genetic resistance is an effective and sustainable control strategy, but major resistance genes (encoding receptors for specific pathogen effectors) introgressed from wild Vitis species, although effective, may be non-durable because the pathogen can evolve to avoid specific recognition. Previous transcriptomic studies in the resistant species Vitis riparia highlighted the activation of signal transduction components during infection. The transfer of such components to V. vinifera might confer less specific and therefore more durable resistance. Here, we describe the generation of transgenic V. vinifera lines constitutively expressing the V. riparia E3 ubiquitin ligase gene VriATL156. Phenotypic and molecular analysis revealed that the transgenic plants were less susceptible to P. viticola than vector-only controls, confirming the role of this E3 ubiquitin ligase in the innate immune response. Two independent transgenic lines were selected for detailed analysis of the resistance phenotype by RNA-Seq and microscopy, revealing the profound reprogramming of transcription to achieve resistance that operates from the earliest stages of pathogen infection. The introduction of VriATL156 into elite grapevine cultivars could therefore provide an effective and sustainable control measure against downy mildew.


2019 ◽  
Vol 11 (3) ◽  
pp. 954-969 ◽  
Author(s):  
Yann Dussert ◽  
Isabelle D Mazet ◽  
Carole Couture ◽  
Jérôme Gouzy ◽  
Marie-Christine Piron ◽  
...  

Abstract Downy mildews are obligate biotrophic oomycete pathogens that cause devastating plant diseases on economically important crops. Plasmopara viticola is the causal agent of grapevine downy mildew, a major disease in vineyards worldwide. We sequenced the genome of Pl. viticola with PacBio long reads and obtained a new 92.94 Mb assembly with high contiguity (359 scaffolds for a N50 of 706.5 kb) due to a better resolution of repeat regions. This assembly presented a high level of gene completeness, recovering 1,592 genes encoding secreted proteins involved in plant–pathogen interactions. Plasmopara viticola had a two-speed genome architecture, with secreted protein-encoding genes preferentially located in gene-sparse, repeat-rich regions and evolving rapidly, as indicated by pairwise dN/dS values. We also used short reads to assemble the genome of Plasmopara muralis, a closely related species infecting grape ivy (Parthenocissus tricuspidata). The lineage-specific proteins identified by comparative genomics analysis included a large proportion of RxLR cytoplasmic effectors and, more generally, genes with high dN/dS values. We identified 270 candidate genes under positive selection, including several genes encoding transporters and components of the RNA machinery potentially involved in host specialization. Finally, the Pl. viticola genome assembly generated here will allow the development of robust population genomics approaches for investigating the mechanisms involved in adaptation to biotic and abiotic selective pressures in this species.


Plant Disease ◽  
2017 ◽  
Vol 101 (11) ◽  
pp. 1958-1958
Author(s):  
Y. J. Choi ◽  
S. E. Cho ◽  
H. D. Shin

2021 ◽  
Vol 13 (3) ◽  
pp. 1226
Author(s):  
Ana Cruz-Silva ◽  
Andreia Figueiredo ◽  
Mónica Sebastiana

Grapevine (Vitis vinifera L.), widely used for berry and wine production, is highly susceptible to the pathogenic oomycete Plasmopara viticola, the etiological agent of grapevine downy mildew disease. The method commonly used to prevent and control P. viticola infection relies on multiple applications of chemical fungicides. However, with European Union goals to lower the usage of such chemicals in viticulture there is a need to develop new and more sustainable strategies. The use of beneficial microorganisms with biocontrol capabilities, such as the arbuscular mycorrhizal fungi (AMF), has been pointed out as a viable alternative. With this study, we intended to investigate the effect of AMF colonization on the expression of P. viticola effectors during infection of grapevine. Grapevine plants were inoculated with the AMF Rhizophagus irregularis and, after mycorrhizae development, plants were infected with P. viticola. The expression of P. viticola RxLR effectors was analyzed by real-time PCR (qPCR) during the first hours of interaction. Results show that pre-mycorrhizal inoculation of grapevine alters the expression of several P. viticola effectors; namely, PvRxLR28, which presented decreased expression in mycorrhizal plants at the two time points post-infection tested. These results suggest that the pre-inoculation of grapevine with AMF could interfere with the pathogen’s ability to infect grapevine by modulation of pathogenicity effectors expression, supporting the hypothesis that AMF can be used to increase plant resistance to pathogens and promote more sustainable agriculture practices, particularly in viticulture.


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