scholarly journals Ferns at the digital herbarium of the Central Siberian Botanical Garden SB RAS

2021 ◽  
Vol 9 ◽  
Author(s):  
Nataliya Kovtonyuk ◽  
Irina Han ◽  
Evgeniya Gatilova

According to the data in Index Herbariorum as of 1 December 2020, there are 3426 active herbaria in the world, containing 396,204,891 specimens and 124 herbaria in Russia with more than 16,175,000 specimens. The Central Siberian Botanical Garden of the Siberian Branch of the Russian Academy of Sciences (CSBG SB RAS, Novosibirsk), founded in 1946, historically has two herbarium collections (NS and NSK). Currently these collections contain about 800,000 herbarium specimens comprising vascular plants, mosses, lichens and fungi gathered from all over the world. Digitisation of the NSK type specimens of vascular plants began in 2014 by using the special scanner Herbscan. In 2018, we started digitisation of the NS and NSK collections by using ObjectScan 1600. Pteridophytes (ferns, lycophytes and their extinct free-sporing relatives) are a diverse group of plants that today comprises approximately 12,900 species and plays a major role in terrestrial ecosystems. All herbarium specimens of ferns, collected over 170 years between 1851 and 2021 and stored in the NS and NSK collections, were digitised in 2021, placed at the CSBG SB RAS digital Herbarium (http://herb.csbg.nsc.ru:8081) and published through GBIF. Twenty families of Polypodiopsida, but not Equisetaceae, were included in this dataset. Family Ophioglossaceae was digitised and published in GBIF as a separate dataset. By August 2021, more than 62,600 specimens with good quality images and fully-captured label transcriptions had been placed at CSBG SB RAS Digital Herbarium. A total of 7,758 records of fern occurrences of 363 taxa in the world with 92% geolocations including 5100 records from Russia with 98.7% geolocations that are new for GBIF.org in 2021 were entered. In the dataset specimens from 43 countries of Europe, Asia, America, Africa and Australia (Oceania), 89% of them from Russia, are presented.

2020 ◽  
Vol 24 ◽  
pp. 00042
Author(s):  
Nataliya Kovtonyuk ◽  
Irina Han ◽  
Evgeniya Gatilova ◽  
Nikolai Friesen

Two herbarium collections (NS and NSK) of the Central Siberian Botanical Garden SB RAS keep about 740,000 specimens of vascular plants, collected in Siberia, Russian Far East, Europe, Asia and North America. Genus Allium s. lat. Is presented by 6224 herbarium sheets, all of them were scanned using international standards: at a resolution of 600 dpi, the barcode for each specimen, 24-color scale and scale bar. Images and metadata are stored at the CSBG SB RAS Digital Herbarium, generated by ScanWizard Botany and MiVapp Botany software (Microtek, Taiwan). Datasets were published via IPT at the Global Biodiversity Information Facility portal (gbif.org). In total 207 species of the genus Allium are placed in the CSBS Digital Herbarium, which includes representatives from 13 subgenera and 49 sections of the genus. 35 type specimens of 18 species and subspecies of the genus Allium are hosted in CSBG Herbarium collections.


2020 ◽  
Vol 8 ◽  
Author(s):  
Nataliya Kovtonyuk ◽  
Irina Han ◽  
Evgeniya Gatilova

The Central Siberian Botanical Garden of the Siberian Branch of the Russian Academy of Sciences (CSBG SB RAS) is the largest botanical institution in the Asian part of Russia. Founded in 1946, CSBG SB RAS is historically a consortium of two herbarium collections with their own acronyms (NS and NSK) and registration in the Index Herbariorum (Thiers 2020). At present the NS+NSK collections contain about 800,000 herbarium specimens comprising vascular plants (680,000), mosses (25,000), lichens (80,000) and fungi (15,000) gathered, not only in Siberia, but also in the European part of Russia and other parts of the Eurasian and American continents. CSBG SB RAS has the third largest collection in Russia after the Komarov Botanical Institute of RAS (LE) and Moscow State University (MW) collections. The dataset consists of 5,384 records of digitised herbarium specimens of vascular plants belonging to 111 families, collected since the 19th century in 54 administrative regions from the European part of Russia and kept in NS+NSK collections. Herbarium specimens were digitised using two special scanners, both ObjectScan 1600, according to international standards, at 600 dpi, with a barcode, 24-colour scale and spatial scale bar and placed into the CSBG SB RAS Digital Herbarium. For each specimen, the species name, locality, collection date, collector, ecology and revision label are recorded. More than 94% of the records have coordinates that fall within the area of European Russia, west of the Ural Mountains. A total of 5,384 records of vascular plant occurrences with 94.8% geolocations in the territory of the European Russia West of the Ural Mountains were entered.


Bothalia ◽  
2019 ◽  
Vol 49 (1) ◽  
Author(s):  
Norbert Hahn

Background: The first checklist for the Soutpansberg was published in 1946, and the second list was compiled by the author in 2006 as part of his doctoral thesis. Currently, there is a need for an updated account of the biodiversity of the Soutpansberg Centre of Endemism and Diversity for conservation planning in the Vhembe Biosphere Reserve, within which the Soutpansberg is the principle geomorphological feature.Objectives: To present an updated list of vascular plants recorded for the Soutpansberg.Method: The list was compiled from various sources including literature reviews, herbarium specimens, herbarium databases and personal observations.Results: This article presents the most geographically accurate and taxonomically updated list of the indigenous vascular flora of the Soutpansberg, the northernmost mountain range of South Africa. Altogether 2443 taxa are recorded belonging to 922 genera in 187 families and 64 orders.Conclusion: The list presented in this article confirms the status of the Soutpansberg as a centre of floristic diversity in southern Africa. Notable is the higher-order diversity of the flora. It is likely that both future surveys and reviews of herbarium collections will add new taxa to the current total.


2018 ◽  
Vol 11 ◽  
pp. 00024
Author(s):  
Olga Komina

The paper presents results of multiyear work to create and study the collection of Paeonia L. species in the Central Siberian Botanical Garden of the Siberian Branch of the Russian Academy of Sciences (CSBG SB RAS) (Novosibirsk), which numbers 13 species of 4 botanical sections nowadays. All herbaceous species of the genus Paeonia, both geophytes and hemicryptophytes, have been safely wintered during 12 years without additional shelter. The study shows assessment results of prospects of the genus Paeonia species representatives. It gives recommendations on landscape design for Paeonia species selection.


Phytotaxa ◽  
2013 ◽  
Vol 101 (1) ◽  
pp. 1 ◽  
Author(s):  
ZOË A. GOODWIN ◽  
GERMAN N. LOPEZ ◽  
NEIL STUART ◽  
SAMUEL G.M. BRIDGEWATER ◽  
ELSPETH M. HASTON ◽  
...  

 Lowland savannas, covering an area of 2,342 km2, form the third largest ecosystem in Belize yet are unevenly and therefore poorly represented in the country’s protected area system. Based on more than 5,700 herbarium collections, a checklist of 957 species of vascular plants is presented for this ecosystem representing ca. 28% of the Belizean flora, of which 54 species are new records for the country. Of the 41 species of plants known to be endemic to Belize, 18 have been recorded within the lowland savanna, and nine species are listed in The World Conservation Union (IUCN) 2010 Red List of Threatened Species. Of the total savanna ecosystem flora, 339 species are characteristic of the open savanna, whilst 309 and 114 species are more frequent in forest and wetland areas respectively. Most species (505, 53% of the lowland savanna flora) are herbaceous. Although the lowland savanna has been relatively well collected, there are geographical biases in botanical sampling which have focused historically on the savannas in the centre and the north of the country. A brief review of the collecting history of the lowland savanna is provided, and recommendations are given on how future collecting efforts may best be focused. The lowland savanna is shown to be a significant regional centre of plant diversity.


Diversity ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 619
Author(s):  
Shukherdorj Baasanmunkh ◽  
Magsar Urgamal ◽  
Batlai Oyuntsetseg ◽  
Alisa Grabovskaya-Borodina ◽  
Khurelpurev Oyundelger ◽  
...  

The aim of the present study is to update the checklist of vascular plants endemic to Mongolia using previous checklists, publications, herbarium collections, and field observations. The revised checklist includes 102 endemic taxa (95 species, five subspecies, and two nothospecies) from 43 genera and 19 families. The majority of endemic taxa were distributed in western and central Mongolia, and high endemic species richness was identified in four phytogeographical regions, namely Mongolian Altai, Khangai, Dzungarian Gobi, and Gobi Altai, which harbor 49, 27, 20, and 16 endemic taxa, respectively. For each endemic taxon, we compiled information about growth form, conservation status (if already assessed), phytogeographical distribution, and voucher specimens. Data on each taxon’s type specimen were also collected, and the majority of the type specimens were accessioned at the LE (58 taxa), MW (20 taxa), and UBA (7 taxa) herbaria.


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