Emerging Web Tools and Their Applications in Bioinformatics

2013 ◽  
pp. 1769-1783
Author(s):  
Shailendra Singh ◽  
Amardeep Singh

Bioinformatics is an emerging area of interest for many researchers and scientists. It has unlimited applications in many areas. The most important application of this is to know about genes, et cetera. But nowadays, research has also started in the emerging areas of network security and threats using bioinformatics. In the present scenario, we are highly dependent on Internet. The Web has invited different people from different backgrounds to work together sitting at far places. And to fulfill the needs of the interested and involved people, lots of Web based tools have been developed, and many others are being developed. In this chapter, the area of bioinformatics has been introduced along with its applications, Web, developed Web based tools, and a case study of one such tool.

Author(s):  
Shailendra Singh ◽  
Amardeep Singh

Bioinformatics is an emerging area of interest for many researchers and scientists. It has unlimited applications in many areas. The most important application of this is to know about genes, et cetera. But nowadays, research has also started in the emerging areas of network security and threats using bioinformatics. In the present scenario, we are highly dependent on Internet. The Web has invited different people from different backgrounds to work together sitting at far places. And to fulfill the needs of the interested and involved people, lots of Web based tools have been developed, and many others are being developed. In this chapter, the area of bioinformatics has been introduced along with its applications, Web, developed Web based tools, and a case study of one such tool.


2019 ◽  
Vol 2 ◽  
pp. 1-8
Author(s):  
Jan Wilkening ◽  
Keni Han ◽  
Mathias Jahnke

<p><strong>Abstract.</strong> In this article, we present a method for visualizing multi-dimensional spatio-temporal data in an interactive web-based geovisualization. Our case study focuses on publicly available weather data in Germany. After processing the data with Python and desktop GIS, we integrated the data as web services in a browser-based application. This application displays several weather parameters with different types of visualisations, such as static maps, animated maps and charts. The usability of the web-based geovisualization was evaluated with a free-examination and a goal-directed task, using eye-tracking analysis. The evaluation focused on the question how people use static maps, animated maps and charts, dependent on different tasks. The results suggest that visualization elements such as animated maps, static maps and charts are particularly useful for certain types of tasks, and that more answering time correlates with less accurate answers.</p>


Author(s):  
Amanda Galtman

Using XML as the source format for authoring technical publications creates opportunities to develop tools that provide analysis, author guidance, and visualization. This case study describes two web applications that take advantage of the XML source format of documents. The applications provide a browser-based tool for technical writers and editors in a 100-person documentation department of a software company. Compared to desktop tools, the web applications are more convenient for users and less affected by hard-to-predict inconsistencies among users' computers. One application analyzes file dependencies and produces custom reports that facilitate reorganizing files. The other helps authors visualize their network of topics in their documentation sets. Both applications rely on the XQuery language and its RESTXQ web API. The visualization application also uses JavaScript, including the powerful jQuery and D3 libraries. After discussing what the applications do and why, this paper describes some architectural highlights, including how the different technologies fit together and exchange data.


Author(s):  
Kamaljeet Sandhu

This case study examines the Web Electronic Service framework for a University in Australia. The department is in the process of developing and implementing a Web-based e-service system. The user experience to use e-services requires insight into the attributes that shape the experience variable. The descriptive data about the attributes that form the experience variable is provided in this study.


Author(s):  
Joel J. P. C. Rodrigues ◽  
Pedro F. N. João ◽  
Isabel de la Torre Díez

Intelligent Tutoring Systems (ITS) include interactive applications with some intelligence that supports the learning process. Some of ITS have had a very large impact on educational outcomes in field tests, and they have provided an important ground for artificial intelligence research. This chapter elaborates on recent advances in ITS and includes a case study presenting an ITS called EduTutor. This system was created for the Web-Based Aulanet Learning Management System (LMS). It focuses on subjects for the first cycle of studies of the Portuguese primary education system, between the first and the fourth year. It facilitates the perception of the learning process of each student, individually, in a virtual environment, as a study guide. Moreover, EduTutor has been designed and its architecture prepared for being easily integrated into higher levels of studies, different subjects, and several languages. Currently, it is used in the Aulanet LMS platform.


Minerals ◽  
2019 ◽  
Vol 9 (10) ◽  
pp. 600 ◽  
Author(s):  
Mhlongo ◽  
Amponsah-Dacosta ◽  
Kadyamatimba

The work of quantifying the problems of abandoned mines is the first step towards the rehabilitation of these mines. As the result, in all countries that have many abandoned mines, researchers and different organizations have been making efforts to develop decision-making tools, methods, and techniques for rehabilitation of abandoned mines. This paper describes the work conducted to incorporate the method for ranking the problems of abandoned mine entries into a rule-based expert system. This is done using the web-based expert system platform provided by expert system (ES)-Builder Shell. The ES is tested by applying it to the case study of the problems of abandoned mine entries in the areas of Giyani and Musina, Limpopo Province of South Africa. This paper gives details of the procedure followed in creating the production rules of the ES for ranking problems of abandoned mine entries (ES-RAME), its attributes, and the results of its application to the selected case study. The use of the ES-RAME is found to be important for setting the objectives and priorities of the rehabilitation of abandoned mine entries. In addition, the incorporation of the ranking method into the expert system ensured that the procedure of the tanking method is clearly communicated and preserved as the rules of the ES. The expert system also has the advantages of being consistent in its guidance, and it gives the user an opportunity to go through the ranking process of the system using any possible fictitious information; this gives the user a feel for the ranking process and the data required when using the ES-RAME.


2000 ◽  
Vol 54 (3) ◽  
pp. 239-257 ◽  
Author(s):  
Marcus Fontoura ◽  
Sérgio Crespo ◽  
Carlos José Lucena ◽  
Paulo S.C Alencar ◽  
Donald D Cowan

Author(s):  
Diana Benito Osorio ◽  
Montserrat Jiménez Partearroyo ◽  
Luis Miguel Arroyo Gutiérrez

Since its conception Open Innovation has become what can be called the reference mark for business innovation management. The aim of this chapter is threefold; first the authors explain the trends that have emerged from the use of web based open innovation by firms. Secondly, they will establish a relationship between these trends and the phases of the New Product Development (NPD) process. Thirdly, they will carry out a concrete qualitative analysis based on active intermediaries firms. The authors compare different case study of companies that offer themselves as intermediaries in the web for open innovation practices oriented to the product.


Author(s):  
Kathleen Gray ◽  
Fernando Martin Sanchez ◽  
Gabrielle Bright ◽  
Ardis Cheng

There are compelling arguments for using emerging Web technologies to facilitate research in the biomedical sciences. This chapter reviews current research and current technologies for e-collaboration in biomedical research. This chapter presents four case studies examining the use of Web-based tools to support the teamwork of geographically distributed biomedical researchers. It then reviews case study findings in light of the Web 2.0 e-collaboration enablers that are available. It concludes with surprising and concerning reflections about current practices in biomedical research collaboration as well as some promising future directions through the use of biomedical informatics to advance these practices by addressing human factors.


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