A Comparative Study of the Current 3D Motif Combination Methods

2005 ◽  
Vol 295-296 ◽  
pp. 465-470
Author(s):  
Jun Guo ◽  
Y. Gao ◽  
T. Xie
Keyword(s):  
Evaluation Method ◽  
Hybrid Methods ◽  
Function Analysis ◽  
Three Dimensional ◽  
Combination Method ◽  
Iso Standard ◽  
Application Range ◽  
Combination Methods ◽  
Special Surface ◽  
Motif Combination

As a special surface texture evaluation method, motif has received much attention since it was adopted as an ISO standard which is ISO12085 1996. However, like many other evaluation methods, it is based on 2 dimensional lines. The surface itself is three dimensional in nature. 3D motif evaluation should be more suitable. Until now, no 3D motif evaluation method has yet been proposed. A key issue is 3D motif combination to determine how the evaluation should be implemented. Three types of 3D MOTIF combination methods currently used are examined. Features such as algorithm complexity and application range are investigated. We conclude that the best 3D Motif combination method is not currently available. We should select a combination method based on the need for surface function analysis. Hybrid methods are also recommended.

Analyzing Structural and Functional Characteristics of Collagenase from Bacillus cereus MH19 via in silico Approaches

2020 ◽  
Vol 17 (3) ◽  
pp. 200-212
Author(s):  
Shihua Chen ◽  
Meihu Ma ◽  
Xing Fu
Keyword(s):  
Bacillus Cereus ◽  
Function Analysis ◽  
Structural Characteristics ◽  
3D Structure ◽  
Domain Architecture ◽  
Three Dimensional ◽  
Evolutionary Relationship ◽  
Helical Structure ◽  
Functional Characteristics ◽  
Application Range

Background: Collagenase is a type of proteolytic enzyme that specifically hydrolyzes native collagen with a three-dimensional helical structure. The structure and properties of collagenase vary with different sources and types. In addition to the well-characterized Clostridium collagenase, other collagenases are largely unknown. Various gene and protein databases have been widely used to mine novel functional genes in the genome. Gene mining and sequence analysis are effective methods for studying these enzymes. Objective: The present study aimed to understand the molecular, structural, and functional characteristics of collagenase from Bacillus cereus MH19 using a bioinformatics approach. Method: Based on the three-generation sequencing PacBio technique, Sequencing the Bacillus cereus MH19 genome. Function annotation is completed by blasting genes with different databases. Collagenases were investigated based on the physiochemical properties, phylogenetic relation, and domain architecture. The 3D structure model of the selected collagenase has been constructed and verified by SAVES. Results: There were 5 collagenases in Bacillus cereus MH19 with a molecular weight distribution ranging from 36-110 kDa. The analysis of evolutionary relationship between different collagenases indicating that the BCC000504 and BCC003388 collagenase gene sequences are closer to the typical collagenase genes ColG, ColA, and ColH, followed by BCC003615. The domain and function analysis showed that the collagenases BCC000504 and BCC003388 were similar to the collagenases ColG, ColA and ColH. BCC004271 was similar to BCC004272, and BCC003615 might be quite different from other collagenases. The secondary structure of collagenase was analyzed. The SAVES evaluation indicates that 3D structural modeling of the selected collagenase is acceptable. Conclusion: This study provides an overview of the molecular, functional, and structural characteristics of collagenase from Bacillus cereus MH19, which helps to understand the bacterial collagenase. The characterization of the collagenase will certainly expand the application range of collagenase.

scholarly journals An improved conflicting-evidence combination method based on the redistribution of the basic probability assignment

2021 ◽  
Author(s):  
Zezheng Yan ◽  
Hanping Zhao ◽  
Xiaowen Mei
Keyword(s):  
Evidence Theory ◽  
Combination Method ◽  
Probability Assignment ◽  
Basic Probability Assignment ◽  
Combination Methods ◽  
Conflicting Evidence ◽  
Basic Probability ◽  
The Right ◽  
Conflict Intensity ◽  
Dempster’S Rule Of Combination

AbstractDempster–Shafer evidence theory is widely applied in various fields related to information fusion. However, the results are counterintuitive when highly conflicting evidence is fused with Dempster’s rule of combination. Many improved combination methods have been developed to address conflicting evidence. Nevertheless, all of these approaches have inherent flaws. To solve the existing counterintuitive problem more effectively and less conservatively, an improved combination method for conflicting evidence based on the redistribution of the basic probability assignment is proposed. First, the conflict intensity and the unreliability of the evidence are calculated based on the consistency degree, conflict degree and similarity coefficient among the evidence. Second, the redistribution equation of the basic probability assignment is constructed based on the unreliability and conflict intensity, which realizes the redistribution of the basic probability assignment. Third, to avoid excessive redistribution of the basic probability assignment, the precision degree of the evidence obtained by information entropy is used as the correction factor to modify the basic probability assignment for the second time. Finally, Dempster’s rule of combination is used to fuse the modified basic probability assignment. Several different types of examples and actual data sets are given to illustrate the effectiveness and potential of the proposed method. Furthermore, the comparative analysis reveals the proposed method to be better at obtaining the right results than other related methods.

scholarly journals In-Process Measurement of Three-Dimensional Deformations Based on Speckle Photography

2021 ◽  
Vol 11 (11) ◽  
pp. 4981
Author(s):  
Andreas Tausendfreund ◽  
Dirk Stöbener ◽  
Andreas Fischer
Keyword(s):  
Evaluation Method ◽  
Process Analysis ◽  
Plane Deformation ◽  
Three Dimensional ◽  
Machining Process ◽  
Image Correlation ◽  
Speckle Photography ◽  
Process Measurement ◽  
Out Of Plane ◽  
Plane Deformations

In the concept of the process signature, the relationship between a material load and the modification remaining in the workpiece is used to better understand and optimize manufacturing processes. The basic prerequisite for this is to be able to measure the loads occurring during the machining process in the form of mechanical deformations. Speckle photography is suitable for this in-process measurement task and is already used in a variety of ways for in-plane deformation measurements. The shortcoming of this fast and robust measurement technique based on image correlation techniques is that out-of-plane deformations in the direction of the measurement system cannot be detected and increases the measurement error of in-plane deformations. In this paper, we investigate a method that infers local out-of-plane motions of the workpiece surface from the decorrelation of speckle patterns and is thus able to reconstruct three-dimensional deformation fields. The implementation of the evaluation method enables a fast reconstruction of 3D deformation fields, so that the in-process capability remains given. First measurements in a deep rolling process show that dynamic deformations underneath the die can be captured and demonstrate the suitability of the speckle method for manufacturing process analysis.

scholarly journals SOLUTION OF THE MULTIDIMENSIONAL DIFFUSION EQUATION USING LIE SYMMETRIES: SIMULATION OF POLLUTANT DISPERSION IN THE ATMOSPHERE

2005 ◽  
Vol 4 (2) ◽  
Author(s):  
J. R. Zabadal ◽  
C. A. Poffal
Keyword(s):  
Differential Operators ◽  
Hybrid Methods ◽  
Formal Solution ◽  
Three Dimensional ◽  
Closed Form Solution ◽  
Pollutant Dispersion ◽  
Form Solution ◽  
Lie Symmetries ◽  
Advection Equation ◽  
Mean Values

Several analytical, numerical and hybrid methods are being used to solve diffusion and diffusion advection problems. In this work, a closed form solution of the three-dimensional diffusion advection equation in a Cartesian coordinate system is obtained by applying rules, based on the Lie symmetries, to manipulate the exponential of the differential operators that appear in its formal solution. There are many advantages of applying these rules: the increase in processing velocity so that the solution may be obtained in real time, the reduction in the amount of memory required to perform the necessary tasks in order to obtain the solution, since the analytical expressions can be easily manipulated in post-processing and also the discretization of the domain may not be necessary in some cases, avoiding the use of mean values for some parameters involved. These rules yield good results when applied to obtain solutions for problems in fluid mechanics and in quantum mechanics. In order to show the performance of the method, a one-dimensional scenario of the pollutant dispersion in a stable boundary layer is simulated, considering that the horizontal component of the velocity field is dominant and constant, disregarding the other components. The results are compared with data available in the literature.

scholarly journals Joint Investigation and 3D Visual Evaluation of Rock Mass Quality

2020 ◽  
Vol 2020 ◽  
pp. 1-16
Author(s):  
Haiping Yuan ◽  
Chenghao Chen ◽  
Yixian Wang ◽  
Hanbing Bian ◽  
Yan Liu
Keyword(s):  
Rock Mass ◽  
Quality Evaluation ◽  
Evaluation Method ◽  
Three Dimensional ◽  
Rock Mass Classification ◽  
National Standard ◽  
Ratio Method ◽  
Rock Mass Quality ◽  
Close Range ◽  
Mass Classification

In order to realize the high efficiency quality classification and three-dimensional visualization of engineering rock mass and to solve the technical difficulties of the traditional rock mass quality evaluation method such as high labor intensity, long process time consumption, many intervention processes such as scale measurement and manual calculation, and nonintuitive classification results, this paper puts forward a 3D visual rock mass quality evaluation method and system based on close-range photography, which optimizes the traditional rock mass quality evaluation method, makes the rock mass classification three-dimensional and visible, and realizes the estimation of unrevealed rock mass quality evaluation index. The research results show the following: (1) The method of storing joint information by close-range photography and extracting joint information by human-computer interaction improves the working efficiency and the process is safe and controllable compared with the traditional method of collecting fracture parameters. (2) Based on the statistical analysis of 97 groups of roadway survey data, the comprehensive statistical regression formula between BQ value of Chinese national standard and RMR value is given, and there is a good correlation between BQ value and RMR value of rock mass quality index. (3) Based on the power-inverse ratio method, the three-dimensional model of rock mass classification of the mine was established, and the cutting model obtained the current distribution diagram of rock mass quality grade, providing scientific reference for drilling, blasting, support, and other production design optimizations.

scholarly journals SOLUTION OF THE MULTIDIMENSIONAL DIFFUSION EQUATION USING LIE SYMMETRIES: SIMULATION OF POLLUTANT DISPERSION IN THE ATMOSPHERE

2005 ◽  
Vol 4 (2) ◽  
pp. 197
Author(s):  
J. R. Zabadal ◽  
C. A. Poffal
Keyword(s):  
Differential Operators ◽  
Hybrid Methods ◽  
Formal Solution ◽  
Three Dimensional ◽  
Closed Form Solution ◽  
Pollutant Dispersion ◽  
Form Solution ◽  
Lie Symmetries ◽  
Advection Equation ◽  
Mean Values

Several analytical, numerical and hybrid methods are being used to solve diffusion and diffusion advection problems. In this work, a closed form solution of the three-dimensional diffusion advection equation in a Cartesian coordinate system is obtained by applying rules, based on the Lie symmetries, to manipulate the exponential of the differential operators that appear in its formal solution. There are many advantages of applying these rules: the increase in processing velocity so that the solution may be obtained in real time, the reduction in the amount of memory required to perform the necessary tasks in order to obtain the solution, since the analytical expressions can be easily manipulated in post-processing and also the discretization of the domain may not be necessary in some cases, avoiding the use of mean values for some parameters involved. These rules yield good results when applied to obtain solutions for problems in fluid mechanics and in quantum mechanics. In order to show the performance of the method, a one-dimensional scenario of the pollutant dispersion in a stable boundary layer is simulated, considering that the horizontal component of the velocity field is dominant and constant, disregarding the other components. The results are compared with data available in the literature.

scholarly journals Study on Effect Evaluation Method of Weak Gel Flooding Control in Ordinary Heavy Oil Reservoirs

2020 ◽  
Vol 213 ◽  
pp. 02020
Author(s):  
Fachao Shan ◽  
Lun Zhao ◽  
Anzhu Xu ◽  
Bing Bo ◽  
Gang Ma ◽  
...  
Keyword(s):  
Heavy Oil ◽  
Evaluation Method ◽  
Characteristic Curve ◽  
Oil Reservoirs ◽  
Water Flooding ◽  
Effect Evaluation ◽  
Application Range ◽  
Heavy Oil Reservoirs ◽  
Single Well ◽  
Curve Method

Generally the dynamic methods are used to calculate the oil increase after flooding control in the oilfield, but the evaluation results of different methods are quite different, and the evaluation results are uncertain. Therefore, for flooding control well groups in heavy oil reservoirs, the water flooding characteristic curve method, decline method and net oil increase method are used to calculate the oil increase, and the influence of the method parameter values on the results are analyzed, and the parameter value limits and calculation errors of each method are determined. Based on this, the adaptability of each method is proposed. The results show that the effect evaluation of the whole region flooding control is suitable to use the water flooding characteristic curve method or the decline method, the effect evaluation of the single well group flooding control is more suitable to use the decline method, the net oil increase method is not recommended. The application range and parameter value limit of the effect evaluation method of flooding control are put forward, which can guide the actual production effect evaluation in the oilfield.

Comparison of Different Methods for the Evaluation of Cavitation Damaged Surfaces

2005 ◽  
Author(s):  
B. Bachert ◽  
G. Ludwig ◽  
B. Stoffel ◽  
S. Baumgarten
Keyword(s):  
Mass Loss ◽  
White Light ◽  
Cavitation Erosion ◽  
Evaluation Method ◽  
Three Dimensional ◽  
Special Device ◽  
Test Rig ◽  
Rotating Disc ◽  
White Light Interferometer ◽  
Initial Stage

The experimental data which will be presented in this paper are the results of the comparison between different methods for evaluating damaged surfaces by cavitation erosion. The different methods are partly working in the initial stage of cavitation erosion and partly at developed cavitation erosion, where mass loss occurs. The used test rig consists basically of a rotating disc with a diameter of 500 mm on which four holes are located. Each hole generates a cavitation zone while the disc is rotating. The test objects are material specimens made of copper. Copper was used as test material in respect to reasonable durations for the tests. The specimen can be implemented in the casing of the test rig directly across the rotating disc on the diameter where the holes are located. This rotating disc test rig generates a very aggressive type of cavitation, so that mass loss, of course depending on the tested material, will appear after relatively short durations. Also the initial stage of cavitation erosion can be observed. The used test rig is very interesting regarding the possibility to apply different measuring techniques to characterize the erosive aggressiveness of cavitation. These techniques are at first the so-called Pitcount-Method, which allows investigations of cavitation erosion in the initial stage. The second one is an acoustic method, which is based on a structure-borne noise sensor and a specially developed signal processing system. The third method is the measuring of mass loss of the material specimen after several time steps. With the help of a CCD-camera and special digital image processing software, images of different cavitation conditions were recorded. The information obtained from these images should serve as support for the evaluation of the other used methods. After the evaluation with the above mentioned methods, the specimens were evaluated with a special device which works with the help of a white light interferometer. With this evaluation method three-dimensional information can be obtained in respect to the actually eroded volume of the specimens. With this information the lost mass of the specimens could be calculated directly. Especially the comparison of the results obtained from the Pitcount-Method, which is a two-dimensional evaluation method, and the three-dimensional results of the white light interferometer is an important point of the work within this paper.

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