scholarly journals Proving universal common ancestry with similar sequences

2012 ◽  
Vol 4 (1) ◽  
pp. 5 ◽  
Author(s):  
Leonardo De Oliveira Martins ◽  
David Posada
Keyword(s):  
Common Ancestry

Phylogenetic assessment of five filamentous bacteria isolated from bulking activated sludges

1998 ◽  
Vol 37 (4-5) ◽  
pp. 303-306 ◽  
Author(s):  
R. Howarth ◽  
I. M. Head ◽  
R. F. Unz
Keyword(s):  
Ribosomal Rna ◽  
Oligonucleotide Probe ◽  
Strong Relationship ◽  
Bootstrap Support ◽  
Its Sequence ◽  
Target Sequence ◽  
Common Ancestry ◽  
Filamentous Bacteria ◽  
Axenic Strains ◽  
Rrna Sequences

Nearly complete 16S ribosomal RNA (rRNA) sequences were determined for fully characterised axenic strains of Thiothrix, Eikelboom type O21N, and Eikelboom type 1701 originally isolated from bulking activated sludges. Thiothrix strains formed a monophyletic group (100% bootstrap support) with previously described Thiothrix nivea strain JP2 and Thiothrix ramosa. Eikelboom type O21N strain AP3 revealed a sufficiently strong relationship to the Thiothrix group to suggest a common ancestry for the two organism although it was not possible to designate type 021N as a species of Thiothrix. Eikelboom type 1701 contained within its sequence the target sequence of an oligonucleotide probe for the detection of Sphaerotilus natans.

scholarly journals The Lamprey Forebrain – Evolutionary Implications

2021 ◽  
pp. 1-16
Author(s):  
Shreyas M. Suryanarayana ◽  
Juan Pérez-Fernández ◽  
Brita Robertson ◽  
Sten Grillner
Keyword(s):  
Basal Ganglia ◽  
Sensory Integration ◽  
Critical Role ◽  
Detailed Comparison ◽  
Common Ancestry ◽  
Dopamine System ◽  
Cortical Areas ◽  
Neural Processes ◽  
Living Group ◽  
Selection Of

The forebrain plays a critical role in a broad range of neural processes encompassing sensory integration and initiation/selection of behaviour. The forebrain functions through an interaction between different cortical areas, the thalamus, the basal ganglia with the dopamine system, and the habenulae. The ambition here is to compare the mammalian forebrain with that of the lamprey representing the oldest now living group of vertebrates, by a review of earlier studies. We show that the lamprey dorsal pallium has a motor, a somatosensory, and a visual area with retinotopic representation. The lamprey pallium was previously thought to be largely olfactory. There is also a detailed similarity between the lamprey and mammals with regard to other forebrain structures like the basal ganglia in which the general organisation, connectivity, transmitters and their receptors, neuropeptides, and expression of ion channels are virtually identical. These initially unexpected results allow for the possibility that many aspects of the basic design of the vertebrate forebrain had evolved before the lamprey diverged from the evolutionary line leading to mammals. Based on a detailed comparison between the mammalian forebrain and that of the lamprey and with due consideration of data from other vertebrate groups, we propose a compelling account of a pan-vertebrate schema for basic forebrain structures, suggesting a common ancestry of over half a billion years of vertebrate evolution.

Efflux-mediated antiseptic resistance gene qacA from Staphylococcus aureus: common ancestry with tetracycline- and sugar-transport proteins

1990 ◽  
Vol 4 (12) ◽  
pp. 2051-2062 ◽  
Author(s):  
D. A. Rouch ◽  
D. S. Cram ◽  
D. Berardino ◽  
T. G. Littlejohn ◽  
R. A. Skurray
Keyword(s):  
Staphylococcus Aureus ◽  
Resistance Gene ◽  
Sugar Transport ◽  
Transport Proteins ◽  
Common Ancestry

scholarly journals The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry

PLoS Genetics ◽  
2012 ◽  
Vol 8 (11) ◽  
pp. e1003088 ◽  
Author(s):  
Pierre J. G. M. de Wit ◽  
Ate van der Burgt ◽  
Bilal Ökmen ◽  
Ioannis Stergiopoulos ◽  
Kamel A. Abd-Elsalam ◽  
...  
Keyword(s):  
Plant Pathogens ◽  
Cladosporium Fulvum ◽  
Common Ancestry ◽  
Fungal Plant Pathogens ◽  
Dothistroma Septosporum

An Ancient Retrovirus-like Element Contains Hot Spots for SINE Insertion

Genetics ◽  
2001 ◽  
Vol 158 (2) ◽  
pp. 769-777
Author(s):  
Michael A Cantrell ◽  
Brian J Filanoski ◽  
Angela R Ingermann ◽  
Katherine Olsson ◽  
Nicole DiLuglio ◽  
...  
Keyword(s):  
Hot Spots ◽  
Hot Spot ◽  
Phylogenetic Analyses ◽  
Common Ancestry ◽  
Specific Element ◽  
Sine Insertion ◽  
Specific Locus ◽  
Multiple Species ◽  
Phylogenetic Character ◽  
Over Time

Abstract Vertebrate retrotransposons have been used extensively for phylogenetic analyses and studies of molecular evolution. Information can be obtained from specific inserts either by comparing sequence differences that have accumulated over time in orthologous copies of that insert or by determining the presence or absence of that specific element at a particular site. The presence of specific copies has been deemed to be an essentially homoplasy-free phylogenetic character because the probability of multiple independent insertions into any one site has been believed to be nil. Mys elements are a type of LTR-containing retrotransposon present in Sigmodontine rodents. In this study we have shown that one particular insert, mys-9, is an extremely old insert present in multiple species of the genus Peromyscus. We have found that different copies of this insert show a surprising range of sizes, due primarily to a continuing series of SINE (short interspersed element) insertions into this locus. We have identified two hot spots for SINE insertion within mys-9 and at each hot spot have found that two independent SINE insertions have occurred at identical sites. These results have major repercussions for phylogenetic analyses based on SINE insertions, indicating the need for caution when one concludes that the existence of a SINE at a specific locus in multiple individuals is indicative of common ancestry. Although independent insertions at the same locus may be rare, SINE insertions are not homoplasy-free phylogenetic markers.

Genetic Transformation of Streptococcus sanguis (Challis) with Cryptic Plasmids from Streptococcus ferus

1980 ◽  
Vol 28 (3) ◽  
pp. 692-699 ◽  
Author(s):  
Francis L. Macrina ◽  
Patricia H. Wood ◽  
Kevin R. Jones
Keyword(s):  
Genetic Transformation ◽  
Streptococcus Mutans ◽  
Restriction Enzyme ◽  
Deoxyribonucleic Acid ◽  
Cryptic Plasmid ◽  
Common Ancestry ◽  
Erythromycin Resistance ◽  
Streptococcus Sanguis ◽  
Cryptic Plasmids ◽  
Isogenic Strains

By using the basic methodology initially published by Kretschmer et al. (J. Bacteriol. 124 :225-231, 1975), we have been able to introduce phenotypically cryptic plasmids from Streptococcus ferus (formerly Streptococcus mutans subsp. ferus ) into Streptococcus sanguis by genetic transformation. In this system, the entry of the cryptic plasmids is selected indirectly. This is effected with transforming deoxyribonucleic acid mixtures in which the cryptic plasmid deoxyribonucleic acid is present in an approximate 10-fold molar excess with respect to a plasmid (pVA1) known to confer erythromycin resistance. Under such conditions, 5 to 10% of the pVA1-containing erythromycin-resistant transformants were cotransformed with cryptic plasmid deoxyribonucleic acid. pVA1 may be selectively eliminated by growth of its S. sanguis host strain at 42°C, enabling the construction of isogenic strains with and without S. ferus cryptic plasmids. Comparative physiological studies of such strains have failed to reveal any plasmid-conferred phenotypes in S. sanguis. With this procedure, we have been able to physically separate two small cryptic plasmids (2.4 × 10 6 and 2.8 × 10 6 daltons) of S. ferus. Although these plasmids were found naturally to exist in a single S. ferus host, they were able to replicate independently of one another in S. sanguis. Restriction enzyme fingerprinting indicated that these plasmids did not share a common ancestry.

scholarly journals Recent common ancestry of human Y chromosomes: Evidence from DNA sequence data

2000 ◽  
Vol 97 (13) ◽  
pp. 7360-7365 ◽  
Author(s):  
R. Thomson ◽  
J. K. Pritchard ◽  
P. Shen ◽  
P. J. Oefner ◽  
M. W. Feldman
Keyword(s):  
Dna Sequence ◽  
Sequence Data ◽  
Common Ancestry ◽  
Dna Sequence Data ◽  
Y Chromosomes
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