scholarly journals The nitrogen isotope effect of benthic remineralization-nitrification-denitrification coupling in an estuarine environment

2011 ◽  
Vol 8 (6) ◽  
pp. 11689-11723
Author(s):  
M. Alkhatib ◽  
M. F. Lehmann ◽  
P. A. del Giorgio
Keyword(s):  
Organic Matter ◽  
Water Column ◽  
Pore Water ◽  
Bottom Water ◽  
Isotope Fractionation ◽  
N Budget ◽  
N Transformations ◽  
Lawrence Estuary ◽  
Water Oxygen ◽  
Oxygen Concentrations

Abstract. The nitrogen (N) stable isotopic composition of pore water nitrate and total dissolved N (TDN) was measured in sediments of the St. Lawrence Estuary and the Gulf of St. Lawrence. The study area is characterized by gradients in organic matter reactivity, bottom water oxygen concentrations, as well as benthic respiration rates. Benthic N isotope exchange, as well as the nitrate and TDN isotope effects of benthic nitrification-denitrification coupling on the water column, &amp;varepsilon;app and &amp;varepsilon;sed, respectively, were investigated. The sediments were a major sink for nitrate and a source of reduced dissolved N (RDN = DON + NH4+). We observed that both the pore water nitrate and RDN pools were enriched in 15N relative to the water column, with increasing δ15N downcore in the sediments. As in other marine environments, the biological nitrate isotope fractionation of net nitrate elimination was barely expressed at the scale of sediment-water-exchange, with &amp;varepsilon;app values <3‰. The strongest under-expression of the biological N isotope fractionation was observed at the most oxygenated sites with the least reactive organic matter, indicating that, through their control on the depth of the denitrification zone, bottom water oxygen concentrations and the organic matter reactivity can modulate &amp;varepsilon;app. For the first time, actual measurements of δ15N of pore water RDN were included in the calculations of &amp;varepsilon;sed. We argue that large fractions of the sea-floor-derived DON are reactive and, hence, involved in the development of the δ15N of dissolved inorganic N (DIN) in the water column. In the St. Lawrence sediments, the combined benthic N transformations yield a flux of 15N-enriched RDN that can significantly enhance &amp;varepsilon;sed. Calculated &amp;varepsilon;sed values were within the range of 4.6 ± 2‰, and were related to organic matter reactivity and oxygen penetration depth in the sediments. &amp;varepsilon;sed reflects the δ15N of the N2 lost from marine sediments and thus best describes the isotopic impact of N elimination on the oceanic fixed N pool. Our mean value for &amp;varepsilon;sed is larger than assumed by earlier work, questioning current ideas with regards to the state of balance of the modern N budget.

scholarly journals The nitrogen isotope effect of benthic remineralization-nitrification-denitrification coupling in an estuarine environment

2012 ◽  
Vol 9 (5) ◽  
pp. 1633-1646 ◽  
Author(s):  
M. Alkhatib ◽  
M. F. Lehmann ◽  
P. A. del Giorgio
Keyword(s):  
Organic Matter ◽  
Water Column ◽  
Pore Water ◽  
Bottom Water ◽  
Isotope Fractionation ◽  
N Loss ◽  
N Transformations ◽  
Lawrence Estuary ◽  
Water Oxygen ◽  
Oxygen Concentrations

Abstract. The nitrogen (N) stable isotopic composition of pore water nitrate and total dissolved N (TDN) was measured in sediments of the St. Lawrence Estuary and the Gulf of St. Lawrence. The study area is characterized by gradients in organic matter reactivity, bottom water oxygen concentrations, as well as benthic respiration rates. N isotope effects on the water column associated with the benthic exchange of nitrate (εapp) and TDN (εsed) during benthic nitrification-denitrification coupling were investigated. The sediments were a major sink for nitrate and a source of reduced dissolved N (RDN = DON + NH4+). We observed that both the pore water nitrate and RDN pools were enriched in 15N relative to the water column, with increasing δ15N downcore in the sediments. As in other marine environments, the biological nitrate isotope fractionation of net fixed N loss was barely expressed at the scale of sediment-water exchange, with &amp;varepsilon;app values <3‰. The strongest under-expression (i.e. lowest εapp) of the biological N isotope fractionation was observed at the most oxygenated sites with the least reactive organic matter, indicating that, through their control on the depth of the denitrification zone, bottom water oxygen concentrations and the organic matter reactivity can modulate εapp. For the first time, actual measurements of δ15N of pore water RDN were included in the calculations of εsed. We argue that large fractions of the sea-floor-derived DON are reactive and, hence, involved in the development of the δ15N of dissolved inorganic N (DIN) in the water column. In the St. Lawrence sediments, the combined benthic N transformations yield a flux of 15N-enriched RDN that can significantly elevate εsed above εapp. Calculated εsed values were within the range of 4.6 ± 2‰ and were related to organic matter reactivity and oxygen penetration depth in the sediments. &amp;varepsilon;sed reflects the δ15N of the N2 lost from marine sediments and thus best describes the isotopic impact of fixed N loss from sediments on the oceanic fixed N pool. Our mean value for εsed is larger than assumed by earlier work, questioning current ideas with regards to the state of balance of the modern N budget.

scholarly journals Benthic fluxes of dissolved organic nitrogen in the Lower St. Lawrence Estuary and implications for selective organic matter degradation

2013 ◽  
Vol 10 (5) ◽  
pp. 7917-7952
Author(s):  
M. Alkhatib ◽  
P. A. del Giorgio ◽  
Y. Gelinas ◽  
M. F. Lehmann
Keyword(s):  
Organic Matter ◽  
Pore Water ◽  
Dissolved Organic Nitrogen ◽  
Organic Nitrogen ◽  
Bottom Water ◽  
Estuarine Sediments ◽  
Pore Waters ◽  
Lower Estuary ◽  
Lawrence Estuary ◽  
St Lawrence Estuary

Abstract. The distribution of dissolved organic nitrogen (DON) and carbon (DOC) in sediment pore waters was determined at nine locations along the St. Lawrence Estuary and in the Gulf of St. Lawrence. The study area is characterized by gradients in the sedimentary particulate organic matter (POM) reactivity, bottom water oxygen concentrations, as well as benthic respiration rates. Based on pore water profiles we estimated the benthic diffusive fluxes of DON and DOC. Our results show that DON fluxed out of the sediments at significant rates (110 to 430 μmol m−2 d−1). DON fluxes were positively correlated with sedimentary POM reactivity and sediment oxygen exposure time (OET), suggesting direct links between POM quality, aerobic remineralization and the release of DON to the water column. DON fluxes were on the order of 30% to 64% of the total benthic inorganic fixed N loss due to denitrification, and often exceeded the diffusive nitrate fluxes into the sediments. Hence they represented a large fraction of the total benthic N exchange. This result is particularly important in light of the fact that DON fluxes are usually not accounted for in estuarine and coastal zone nutrient budgets. The ratio of the DON to nitrate flux increased from 0.6 in the Lower Estuary to 1.5 in the Gulf. In contrast to DON, DOC fluxes did not show any significant spatial variation along the Laurentian Channel (LC) between the Estuary and the Gulf (2100 &amp;pm; 100μmol m−2 d−1), suggesting that production and consumption of labile DOC components proceed at similar rates, irrespective of the overall benthic characteristics and the reactivity of POM. As a consequence, the molar C/N ratio of dissolved organic matter (DOM) in pore water and the overlying bottom water varied significantly along the transect, with lowest C/N in the Lower Estuary (5–6) and highest C/N (> 10) in the Gulf. We observed large differences between the C/N of pore water DOM with respect to POM, and the degree of the C– versus –N element partitioning seems to be linked to POM reactivity and/or redox conditions in the sediment pore waters. Our results thus highlight the variable effects selective OM degradation and preservation can have on bulk sedimentary C/N ratios, decoupling the primary source C/N signatures from those in sedimentary archives. Our study further underscores that the role of estuarine sediments as efficient sinks of bioavailable nitrogen is strongly influenced by the release of DON during early diagenetic reactions, and that DON fluxes from continental margin sediments represent an important internal source of N to the ocean.

scholarly journals Benthic fluxes of dissolved organic nitrogen in the lower St. Lawrence estuary and implications for selective organic matter degradation

2013 ◽  
Vol 10 (11) ◽  
pp. 7609-7622 ◽  
Author(s):  
M. Alkhatib ◽  
P. A. del Giorgio ◽  
Y. Gelinas ◽  
M. F. Lehmann
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Nitrogen ◽  
Organic Nitrogen ◽  
Bottom Water ◽  
Estuarine Sediments ◽  
Internal Source ◽  
Lawrence Estuary ◽  
Element Partitioning ◽  
Sediment Porewaters ◽  
St Lawrence Estuary

Abstract. The distribution of dissolved organic nitrogen (DON) and carbon (DOC) in sediment porewaters was determined at nine locations along the St. Lawrence estuary and in the gulf of St. Lawrence. In a previous manuscript (Alkhatib et al., 2012a), we have shown that this study area is characterized by gradients in the sedimentary particulate organic matter (POM) reactivity, bottom water oxygen concentrations, and benthic respiration rates. Based on the porewater profiles, we estimated the benthic diffusive fluxes of DON and DOC in the same area. Our results show that DON fluxed out of the sediments at significant rates (110 to 430 μmol m−2 d−1). DON fluxes were positively correlated with sedimentary POM reactivity and varied inversely with sediment oxygen exposure time (OET), suggesting direct links between POM quality, aerobic remineralization and the release of DON to the water column. DON fluxes were on the order of 30 to 64% of the total benthic inorganic fixed N loss due to denitrification, and often exceeded the diffusive nitrate fluxes into the sediments. Hence they represented a large fraction of the total benthic N exchange, a result that is particularly important in light of the fact that DON fluxes are usually not accounted for in estuarine and coastal zone nutrient budgets. In contrast to DON, DOC fluxes out of the sediments did not show any significant spatial variation along the Laurentian Channel (LC) between the estuary and the gulf (2100 ± 100 μmol m−2 d−1). The molar C / N ratio of dissolved organic matter (DOM) in porewater and the overlying bottom water varied significantly along the transect, with lowest C / N in the lower estuary (5–6) and highest C / N (> 10) in the gulf. Large differences between the C / N ratios of porewater DOM and POM are mainly attributed to a combination of selective POM hydrolysis and elemental fractionation during subsequent DOM mineralization, but selective adsorption of DOM to mineral phases could not be excluded as a potential C / N fractionating process. The extent of this C- versus N- element partitioning seems to be linked to POM reactivity and redox conditions in the sediment porewaters. Our results thus highlight the variable effects selective organic matter (OM) preservation can have on bulk sedimentary C / N ratios, decoupling the primary source C / N signatures from those in sedimentary paleoenvironmental archives. Our study further underscores that the role of estuarine sediments as efficient sinks of bioavailable nitrogen is strongly influenced by the release of DON during early diagenetic reactions, and that DON fluxes from continental margin sediments represent an important internal source of N to the ocean.

scholarly journals Coastal hypoxia and sediment biogeochemistry

2009 ◽  
Vol 6 (7) ◽  
pp. 1273-1293 ◽  
Author(s):  
J. J. Middelburg ◽  
L. A. Levin
Keyword(s):  
Organic Matter ◽  
Bottom Water ◽  
Water Exchange ◽  
Transport Processes ◽  
Ecosystem Dynamics ◽  
Ecosystem Functions ◽  
Oxygen Levels ◽  
Concise Review ◽  
Water Oxygen ◽  
Sediment Biogeochemistry

Abstract. The intensity, duration and frequency of coastal hypoxia (oxygen concentration <63 μM) are increasing due to human alteration of coastal ecosystems and changes in oceanographic conditions due to global warming. Here we provide a concise review of the consequences of coastal hypoxia for sediment biogeochemistry. Changes in bottom-water oxygen levels have consequences for early diagenetic pathways (more anaerobic at expense of aerobic pathways), the efficiency of re-oxidation of reduced metabolites and the nature, direction and magnitude of sediment-water exchange fluxes. Hypoxia may also lead to more organic matter accumulation and burial and the organic matter eventually buried is also of higher quality, i.e. less degraded. Bottom-water oxygen levels also affect the organisms involved in organic matter processing with the contribution of metazoans decreasing as oxygen levels drop. Hypoxia has a significant effect on benthic animals with the consequences that ecosystem functions related to macrofauna such as bio-irrigation and bioturbation are significantly affected by hypoxia as well. Since many microbes and microbial-mediated biogeochemical processes depend on animal-induced transport processes (e.g. re-oxidation of particulate reduced sulphur and denitrification), there are indirect hypoxia effects on biogeochemistry via the benthos. Severe long-lasting hypoxia and anoxia may result in the accumulation of reduced compounds in sediments and elimination of macrobenthic communities with the consequences that biogeochemical properties during trajectories of decreasing and increasing oxygen may be different (hysteresis) with consequences for coastal ecosystem dynamics.

scholarly journals A 36 kyr geochemical record from the Sea of Japan of organic matter flux variations and changes in intermediate water oxygen concentrations

1999 ◽  
Vol 14 (2) ◽  
pp. 248-259 ◽  
Author(s):  
John Crusius ◽  
Thomas F. Pedersen ◽  
Stephen E. Calvert ◽  
Gregory L. Cowie ◽  
Tadamichi Oba
Keyword(s):  
Organic Matter ◽  
Sea Of Japan ◽  
The Sea Of Japan ◽  
Intermediate Water ◽  
Water Oxygen ◽  
Matter Flux ◽  
Oxygen Concentrations

scholarly journals Living (Rose-Bengal-stained) benthic foraminiferal faunas along a strong bottom-water oxygen gradient on the Indian margin (Arabian Sea)

2015 ◽  
Vol 12 (16) ◽  
pp. 5005-5019 ◽  
Author(s):  
C. Caulle ◽  
M. Mojtahid ◽  
A. J. Gooday ◽  
F. J. Jorissen ◽  
H. Kitazato
Keyword(s):  
Rose Bengal ◽  
Arabian Sea ◽  
Bottom Water ◽  
Monsoon Season ◽  
Water Productivity ◽  
Similar Species ◽  
Low Oxygen ◽  
The Core ◽  
Water Oxygen ◽  
Oxygen Concentrations

Abstract. Rose-Bengal-stained foraminiferal assemblages (> 150 μm) were analysed along a five-station bathymetric transect across the core and the lower part of the oxygen minimum zone (OMZ) on the Indian margin of the Arabian Sea. Sediment cores were collected using the manned submersible Shinkai 6500 during the RV Yokosuka cruise YK08-11 in the post-monsoon season (October 2008) at water depths ranging from 535 to 2000 m, along a gradient from almost anoxic to well-oxygenated (0.3 to 108 μM) bottom waters. Stained benthic foraminifera were investigated from two different size fractions (150–300 μm and > 300 μm). Stained foraminiferal densities were very high in the core of the OMZ (at 535 and 649 m) and decreased at deeper sites. The faunas (> 150 μm) were dominated (40–80 %) by non-calcareous taxa at all stations. These were mainly species of Reophax and Lagenammina but also included delicate monothalamous taxa (organic-walled "allogromiids", agglutinated saccamminids, psammosphaerids and tubular forms). These new data from the Indian margin are compared to previous studies from the Murray Ridge, the Pakistan margin and the Oman margin. The fact that similar species were found at sites with comparable bottom-water oxygen concentrations but with very different surface water productivity suggests that, within the strongly developed Arabian Sea OMZ, bottom-water oxygen concentration, and not the organic flux to the sea floor, is the main factor controlling the species composition of the foraminiferal communities. Several foraminiferal species (e.g. Praeglobobulimina sp. 1, Ammodiscus sp. 1, Bolivina aff. dilatata) were confined to the core of the OMZ. These species are presently known only from the Arabian Sea. Because of their association with extremely low oxygen concentrations, these species may be good markers for very low oxygen concentrations, and could be used to reconstruct past OMZ variability in the Arabian Sea.

scholarly journals The Relationship between Mollusks and Oxygen Concentrations in Todos Santos Bay, Baja California, Mexico

2016 ◽  
Vol 2016 ◽  
pp. 1-10 ◽  
Author(s):  
J. Gabriel Kuk-Dzul ◽  
Victoria Díaz-Castañeda
Keyword(s):  
Organic Matter ◽  
Dissolved Oxygen ◽  
Bottom Water ◽  
Organic Matter Content ◽  
Oxygen Depletion ◽  
Matter Content ◽  
The Other ◽  
Natural Conditions ◽  
The Relationship ◽  
Oxygen Concentrations

This study describes the relationship between mollusks, physicochemical properties of seawater, and sediments under natural conditions of low impact. Thirty-nine stations were sampled in October 1994 using a Van Veen grab (0.1 m−2). Temperature, salinity, and dissolved oxygen (DO) concentrations of bottom water were obtained with a CTD. Organic matter content and sediment grain analysis were determined. A total of 836 mollusks were collected. Gastropoda was the most abundant (52%) and diverse class with 27 genera, followed by Bivalvia with eight genera and Scaphopoda with only one genus. According to CCA analysis, dominant mollusks were significantly related with high DO concentrations.Donax,Natica,Acteocina,Bulla,Anachis,Odostomia, andCrucibulumcan be classified as sensitive genera because they were found mainly in high oxygen concentrations (3.1–5.6 mL L−1); on the other hand,Cardiomya,Nuculana,Laevicardium,Chione,Truncatella, andDentaliumcan be classified as tolerant genera (1.0–5.6 mL L−1). Todos Santos Bay hosts a diverse malacological fauna (36 genera); our results show that the dominant genera were mainly related to high dissolved oxygen concentrations. Mollusks can be a useful tool in environmental monitoring programs related with oxygen depletion in coastal areas.

scholarly journals Coastal hypoxia and sediment biogeochemistry

2009 ◽  
Vol 6 (2) ◽  
pp. 3655-3706 ◽  
Author(s):  
J. J. Middelburg ◽  
L. A. Levin
Keyword(s):  
Organic Matter ◽  
Bottom Water ◽  
Water Exchange ◽  
Transport Processes ◽  
Ecosystem Dynamics ◽  
Ecosystem Functions ◽  
Oxygen Levels ◽  
Concise Review ◽  
Water Oxygen ◽  
Sediment Biogeochemistry

Abstract. The intensity, duration and frequency of coastal hypoxia (oxygen concentration <63 μM) are increasing due to human alteration of coastal ecosystems and changes in oceanographic conditions due to global warming. Here we provide a concise review of the consequences of coastal hypoxia for sediment biogeochemistry. Changes in bottom-water oxygen levels have consequences for early diagenetic pathways (more anaerobic at expense of aerobic pathways), the efficiency of re-oxidation of reduced metabolites and the nature, direction and magnitude of sediment-water exchange fluxes. Hypoxia may also lead to more organic matter accumulation and burial and the organic matter eventually buried is also of higher quality, i.e. less degraded. Bottom-water oxygen levels also affect the organisms involved in organic matter processing with the contribution of metazoans decreasing as oxygen levels drop. Hypoxia has a significant effect on benthic animals with the consequences that ecosystem functions related to macrofauna such as bio-irrigation and bioturbation are significantly affected by hypoxia as well. Since many microbes and microbial-mediated biogeochemical processes depend on animal induced transport processes (e.g. re-oxidation of particulate reduced sulphur and denitrification), there are indirect hypoxia effects on biogeochemistry via the benthos. Severe long-lasting hypoxia and anoxia may result in the accumulation of reduced compounds in sediments and elimination of macrobenthic communities with the consequences that biogeochemical properties during trajectories of decreasing and increasing oxygen may be different (hysteresis) with consequences for coastal ecosystem dynamics.

scholarly journals Geochemical Characteristics of Sediment in Tropical Lake Sentani, Indonesia, Are Influenced by Spatial Differences in Catchment Geology and Water Column Stratification

2021 ◽  
Vol 9 ◽  
Author(s):  
Sulung Nomosatryo ◽  
Rik Tjallingii ◽  
Anja Maria Schleicher ◽  
Paulus Boli ◽  
Cynthia Henny ◽  
...  
Keyword(s):  
Water Chemistry ◽  
Water Column ◽  
Pore Water ◽  
Bottom Water ◽  
Geochemical Characteristics ◽  
Tropical Lake ◽  
Sediment Composition ◽  
Column Structure ◽  
Wide Range ◽  
Sediment Input

Physical and (bio)chemical processes in the catchment as well as internal lake processes influence the composition of lacustrine sediments. Lake internal processes are a consequence of reactions and fluxes between sediment, porewater and the water column. Due to its separation into four interconnected sub-basins, Lake Sentani, Papua Province, Indonesia, is a unique tropical lake that reveals a wide range of geochemical conditions. The highly diverse geological catchment causes mineralogical and chemical differentiation of the sediment input into each sub-basin. Also, strong morphological differences between the sub-basins result in a unique water column structure for each sub-basin, ranging from fully mixed to meromictic. Given the strong differences in sediment composition and bottom water chemistry among the four sub-basins, Lake Sentani offers a unique chance to study multiple lacustrine systems under identical climate conditions and with a common surface water chemistry. We used sediment cores and water samples and measured physicochemical water column profiles to reveal the geochemical characteristics of the water column, the sediment and pore water for all four sub-basins of Lake Sentani. The chemical composition of the sediment reveals differentiation among the sub-basins according to their sediment input and water column structure. Catchment lithology mainly affects overall sediment composition, whereas pore water chemistry is also affected by water column structure, which is related to basin morphology and water depth. In the meromictic sub-basins the bottom water and sediment pore water appear to form a single continuous system, whereas in those sub-basins with oxygenated bottom water the sediment-water interface forms a pronounced chemical barrier.

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