scholarly journals Effective leaf area index retrieving from terrestrial point cloud data: coupling computational geometry application and Gaussian mixture model clustering

Author(s):  
S. Jin ◽  
M. Tamura ◽  
J. Susaki

Leaf area index (LAI) is one of the most important structural parameters of forestry studies which manifests the ability of the green vegetation interacted with the solar illumination. Classic understanding about LAI is to consider the green canopy as integration of horizontal leaf layers. Since multi-angle remote sensing technique developed, LAI obliged to be deliberated according to the observation geometry. Effective LAI could formulate the leaf-light interaction virtually and precisely. To retrieve the LAI/effective LAI from remotely sensed data therefore becomes a challenge during the past decades. Laser scanning technique can provide accurate surface echoed coordinates with densely scanned intervals. To utilize the density based statistical algorithm for analyzing the voluminous amount of the 3-D points data is one of the subjects of the laser scanning applications. Computational geometry also provides some mature applications for point cloud data (PCD) processing and analysing. In this paper, authors investigated the feasibility of a new application for retrieving the effective LAI of an isolated broad leaf tree. Simplified curvature was calculated for each point in order to remove those non-photosynthetic tissues. Then PCD were discretized into voxel, and clustered by using Gaussian mixture model. Subsequently the area of each cluster was calculated by employing the computational geometry applications. In order to validate our application, we chose an indoor plant to estimate the leaf area, the correlation coefficient between calculation and measurement was 98.28 %. We finally calculated the effective LAI of the tree with 6 × 6 assumed observation directions.

2021 ◽  
Vol 13 (15) ◽  
pp. 3036
Author(s):  
Jinling Song ◽  
Xiao Zhu ◽  
Jianbo Qi ◽  
Yong Pang ◽  
Lei Yang ◽  
...  

Understory vegetation plays an important role in the structure and function of forest ecosystems. Light detection and ranging (LiDAR) can provide understory information in the form of either point cloud or full-waveform data. Point cloud data have a remarkable ability to represent the three-dimensional structures of vegetation, while full-waveform data contain more detailed information on the interactions between laser pulses and vegetation; both types have been widely used to estimate various forest canopy structural parameters, including leaf area index (LAI). Here, we present a new method for quantifying understory LAI in a temperate forest by combining the advantages of both types of LiDAR data. To achieve this, we first estimated the vertical distribution of the gap probability using point cloud data to automatically determine the height boundary between overstory and understory vegetation at the plot level. We then deconvolved the full-waveform data to remove the blurring effect caused by the system pulse to restore the vertical resolution of the LiDAR system. Subsequently, we decomposed the deconvolved data and integrated the plot-level boundary height to differentiate the waveform components returned from the overstory, understory, and soil layers. Finally, we modified the basic LiDAR equations introducing understory leaf spectral information to quantify the understory LAI. Our results, which were validated against ground-based measurements, show that the new method produced a good estimation of the understory LAI with an R2 of 0.54 and a root-mean-square error (RMSE) of 0.21. Our study demonstrates that the understory LAI can be successfully quantified through the combined use of point cloud and full-waveform LiDAR data.


2020 ◽  
Vol 12 (15) ◽  
pp. 2378
Author(s):  
Yang Song ◽  
Jinfei Wang ◽  
Jiali Shang ◽  
Chunhua Liao

Knowledge of sub-field yield potential is critical for guiding precision farming. The recently developed simulated observation of point cloud (SOPC) method can generate high spatial resolution winter wheat effective leaf area index (SOPC-LAIe) maps from the unmanned aerial vehicle (UAV)-based point cloud data without ground-based measurements. In this study, the SOPC-LAIe maps, for the first time, were applied to the simple algorithm for yield estimation (SAFY) to generate the sub-field biomass and yield maps. First, the dry aboveground biomass (DAM) measurements were used to determine the crop cultivar-specific parameters and simulated green leaf area index (LAI) in the SAFY model. Then, the SOPC-LAIe maps were converted to green LAI using a normalization approach. Finally, the multiple SOPC-LAIe maps were applied to the SAFY model to generate the final DAM and yield maps. The root mean square error (RMSE) between the estimated and measured yield is 88 g/m2, and the relative root mean squire error (RRMSE) is 15.2%. The pixel-based DAM and yield map generated in this study revealed clearly the within-field yield variation. This framework using the UAV-based SOPC-LAIe maps and SAFY model could be a simple and low-cost alternative for final yield estimation at the sub-field scale.


Forests ◽  
2019 ◽  
Vol 10 (8) ◽  
pp. 660 ◽  
Author(s):  
Yangbo Deng ◽  
Kunyong Yu ◽  
Xiong Yao ◽  
Qiaoya Xie ◽  
Yita Hsieh ◽  
...  

The accurate estimation of leaf area is of great importance for the acquisition of information on the forest canopy structure. Currently, direct harvesting is used to obtain leaf area; however, it is difficult to quickly and effectively extract the leaf area of a forest. Although remote sensing technology can obtain leaf area by using a wide range of leaf area estimates, such technology cannot accurately estimate leaf area at small spatial scales. The purpose of this study is to examine the use of terrestrial laser scanning data to achieve a fast, accurate, and non-destructive estimation of individual tree leaf area. We use terrestrial laser scanning data to obtain 3D point cloud data for individual tree canopies of Pinus massoniana. Using voxel conversion, we develop a model for the number of voxels and canopy leaf area and then apply it to the 3D data. The results show significant positive correlations between reference leaf area and mass (R2 = 0.8603; p < 0.01). Our findings demonstrate that using terrestrial laser point cloud data with a layer thickness of 0.1 m and voxel size of 0.05 m can effectively improve leaf area estimations. We verify the suitability of the voxel-based method for estimating the leaf area of P. massoniana and confirmed the effectiveness of this non-destructive method.


2021 ◽  
Vol 13 (4) ◽  
pp. 803
Author(s):  
Lingchen Lin ◽  
Kunyong Yu ◽  
Xiong Yao ◽  
Yangbo Deng ◽  
Zhenbang Hao ◽  
...  

As a key canopy structure parameter, the estimation method of the Leaf Area Index (LAI) has always attracted attention. To explore a potential method to estimate forest LAI from 3D point cloud at low cost, we took photos from different angles of the drone and set five schemes (O (0°), T15 (15°), T30 (30°), OT15 (0° and 15°) and OT30 (0° and 30°)), which were used to reconstruct 3D point cloud of forest canopy based on photogrammetry. Subsequently, the LAI values and the leaf area distribution in the vertical direction derived from five schemes were calculated based on the voxelized model. Our results show that the serious lack of leaf area in the middle and lower layers determines that the LAI estimate of O is inaccurate. For oblique photogrammetry, schemes with 30° photos always provided better LAI estimates than schemes with 15° photos (T30 better than T15, OT30 better than OT15), mainly reflected in the lower part of the canopy, which is particularly obvious in low-LAI areas. The overall structure of the single-tilt angle scheme (T15, T30) was relatively complete, but the rough point cloud details could not reflect the actual situation of LAI well. Multi-angle schemes (OT15, OT30) provided excellent leaf area estimation (OT15: R2 = 0.8225, RMSE = 0.3334 m2/m2; OT30: R2 = 0.9119, RMSE = 0.1790 m2/m2). OT30 provided the best LAI estimation accuracy at a sub-voxel size of 0.09 m and the best checkpoint accuracy (OT30: RMSE [H] = 0.2917 m, RMSE [V] = 0.1797 m). The results highlight that coupling oblique photography and nadiral photography can be an effective solution to estimate forest LAI.


2016 ◽  
Vol 42 (6) ◽  
pp. 719-729 ◽  
Author(s):  
Yumei Li ◽  
Qinghua Guo ◽  
Shengli Tao ◽  
Guang Zheng ◽  
Kaiguang Zhao ◽  
...  

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