Combining Spectral and Texture Features of UAS-Based Multispectral Images for Maize Leaf Area Index Estimation

The leaf area index (LAI) is of great significance for crop growth monitoring. Recently, unmanned aerial systems (UASs) have experienced rapid development and can provide critical data support for crop LAI monitoring. This study investigates the effects of combining spectral and texture features extracted from UAS multispectral imagery on maize LAI estimation. Multispectral images and in situ maize LAI were collected from test sites in Tongshan, Xuzhou, Jiangsu Province, China. The spectral and texture features of UAS multispectral remote sensing images are extracted using the vegetation indices (VIs) and the gray-level co-occurrence matrix (GLCM), respectively. Normalized texture indices (NDTIs), ratio texture indices (RTIs), and difference texture indices (DTIs) are calculated using two GLCM-based textures to express the influence of two different texture features on LAI monitoring at the same time. The remote sensing features are prescreened through correlation analysis. Different data dimensionality reduction or feature selection methods, including stepwise selection (ST), principal component analysis (PCA), and ST combined with PCA (ST_PCA), are coupled with support vector regression (SVR), random forest (RF), and multiple linear regression (MLR) to build the maize LAI estimation models. The results reveal that ST_PCA coupled with SVR has better performance, in terms of the VIs + DTIs (R2 = 0.876, RMSE = 0.239) and VIs + NDTIs (R2 = 0.877, RMSE = 0.236). This study introduces the potential of different texture indices for maize LAI monitoring and demonstrates the promising solution of using ST_PCA to realize the combining of spectral and texture features for improving the estimation accuracy of maize LAI.

Bayesian Hierarchical Models can Infer Interpretable Predictions of Leaf Area Index From Heterogeneous Datasets

Environmental scientists often face the challenge of predicting a complex phenomenon from a heterogeneous collection of datasets that exhibit systematic differences. Accounting for these differences usually requires including additional parameters in the predictive models, which increases the probability of overfitting, particularly on small datasets. We investigate how Bayesian hierarchical models can help mitigate this problem by allowing the practitioner to incorporate information about the structure of the dataset explicitly. To this end, we look at a typical application in remote sensing: the estimation of leaf area index of white winter wheat, an important indicator for agronomical modeling, using measurements of reflectance spectra collected at different locations and growth stages. Since the insights gained from such a model could be used to inform policy or business decisions, the interpretability of the model is a primary concern. We, therefore, focus on models that capture the association between leaf area index and the spectral reflectance at various wavelengths by spline-based kernel functions, which can be visually inspected and analyzed. We compare models with three different levels of hierarchy: a non-hierarchical baseline model, a model with hierarchical bias parameter, and a model in which bias and kernel parameters are hierarchically structured. We analyze them using Markov Chain Monte Carlo sampling diagnostics and an intervention-based measure of feature importance. The improved robustness and interpretability of this approach show that Bayesian hierarchical models are a versatile tool for the prediction of leaf area index, particularly in scenarios where the available data sources are heterogeneous.

Commercially available organic manures on growth, yield and nutrient content of Burmese Grapes (Baccaurea ramiflora)

A pot experiment was carried out in the net house of the Department of Soil, Water and Environment, University of Dhaka to evaluate the effectS of different organic manures on the growth performance, biomass production, NPKS content in leaf, stem and root of Burmese grapes (Baccaurea ramiflora) and some chemical properties of post- harvest soil. Two-month old Burmese grapes seedlings were planted in different organic manure-treated soils (viz. ACI, BGF, Bhola, Green Life, Kazi, Modern, Mazim, Payel, Payel Earth, and Shebok). A significant variation was observed among the treatments. Compared to control treatment, application of organic manures exhibited a significant influence on the physiological growth, viz. plant height (30.4 - 34.06 cm), leaf area (64.2 - 71.30 cm2/plant), leaf area index (0.17 - 0.19), fresh weight (32.2 - 53.06 g/plant), and dry weight (22.09 - 41.24 g/plant) after 120 days of the experiment. The highest plant height, leaf area, leaf area index, fresh weight, and dry weight were recorded in Kazi, BGF, Payel and Payel Earth, respectively. Similarly, the concentrations of N, P, K, and S in leaf, stem and root, and their uptakes were found significantly higher than the control. The highest N, P, K and S uptake by leaf, stem and root ranged from 37.66 - 41.69 kg/ha, 0.70 - 0.92 g/ha, 66.19 - 84.926 kg/ha and 6.82 - 10.11 kg/ha, respectively. Protein content was the highest in Payel in leaf (8%) and root (5%), and stem (7%) in Modern manure treatment. The overall results revealed that Kazi and Payel manures might be better for raising strong and healthy Burmese grape seedlings. J. Biodivers. Conserv. Bioresour. Manag. 2021, 7(1): 63-72

Global Assimilation of Remotely Sensed Leaf Area Index: The Impact of Updating More State Variables Within a Land Surface Model

As vegetation regulates water, carbon, and energy cycles from the local to the global scale, its accurate representation in land surface models is crucial. The assimilation of satellite-based vegetation observations in a land surface model has the potential to improve the estimation of global carbon and energy cycles, which in turn can enhance our ability to monitor and forecast extreme hydroclimatic events, ecosystem dynamics, and crop production. This work proposes the assimilation of a remotely sensed vegetation product (Leaf Area Index, LAI) within the Noah Multi-Parameterization land surface model using an Ensemble Kalman Filter technique. The impact of updating leaf mass along with LAI is also investigated. Results show that assimilating LAI data improves the estimation of transpiration and net ecosystem exchange, which is further enhanced by also updating the leaf mass. Specifically, transpiration anomaly correlation coefficients improve in about 77 and 66% of the global land area thanks to the assimilation of leaf area index with and without updating leaf mass, respectively. Random errors in transpiration are also reduced, with an improvement of the unbiased root mean square error in 70% (74%) of the total area without the update of leaf mass (with the update of leaf mass). Similarly, net ecosystem exchange anomaly correlation coefficients improve from 52 to 75% and random errors improve from 49 to 62% of the total pixels after the update of leaf mass. Better performances for both transpiration and net ecosystem exchange are observed across croplands, but the largest improvement is shown over forests and woodland. The global scope of this work makes it particularly important in data poor regions (e.g., Africa, South Asia), where ground observations are sparse or not available altogether but where an accurate estimation of carbon and energy variables can be critical to improve ecosystem and crop management.

Improving Leaf Area Index Retrieval Using Multi-Sensor Images and Stacking Learning in Subtropical Forests of China

The leaf area index (LAI) is a key indicator of the status of forest ecosystems that is important for understanding global carbon and water cycles as well as terrestrial surface energy balances and the impacts of climate change. Machine learning (ML) methods offer promising ways of generating spatially explicit LAI data covering large regions based on optical images. However, there have been few efforts to analyze the LAI in heterogeneous subtropical forests with complex terrain by fusing high-resolution multi-sensor data from the Sentinel-1 Synthetic Aperture Radar (SAR), Sentinel-2 Multi Spectral Instrument (MSI), and Advanced Land Observing Satellite-1 digital elevation model (DEM). Here, forest LAI mapping was performed by integrating the MSI, SAR, and DEM data using a stacking learning (SL) approach that incorporates distinct predictions from a set of optimized individual ML algorithms. The method’s performance was evaluated by comparison to field forest LAI measurements acquired in Xingguo and Gandong of subtropical China. The results showed that the addition of the SAR and DEM images using the SL model compared to the inputs of only optical images reduced the mean absolute error (MAE) and root mean square error (RMSE) by 26% and 18%, respectively, in Xingguo, and by 12% and 8%, respectively, in Gandong. Furthermore, the combination of all images had the best prediction performance. SL was found to be more robust and accurate than conventional individual ML models, while the MAE and RMSE were decreased by 71% and 64%, respectively, in Xingguo, and by 68% and 59%, respectively, in Gandong. Therefore, the SL model using the three-source data combination produced satisfied prediction accuracy with the coefficients of determination (R2), MAE, and RMSE of 0.96, 0.17, and 0.28, respectively, in Xingguo and 0.94, 0.30, and 0.47, respectively, in Gandong. This study revealed the potential of the SL algorithm for retrieving the forest LAI using multi-sensor data in areas with complex terrain.