scholarly journals Characterization of Xanthomonas citri pv. glycines Population Genetics and Virulence in a National Survey of Bacterial Pustule Disease in Korea

2021 ◽  
Vol 37 (6) ◽  
pp. 652-661
Author(s):  
In-Jeong Kang ◽  
Kyung Seok Kim ◽  
Gwyn A. Beattie ◽  
Hyunjung Chung ◽  
Sunggi Heu ◽  
...  
Keyword(s):  
Nationwide Survey ◽  
Xanthomonas Citri ◽  
Banding Patterns ◽  
Soybean Cultivars ◽  
High Virulence ◽  
Show Evidence ◽  
Pathogenicity Tests ◽  
New Type ◽  
Type Strains

Xanthomonas citri pv. glycines (Xcg) is a major pathogen of soybean (Glycine max) in South Korea, despite the availability of soybean varieties with some resistance. We conducted a nationwide survey of the incidence and severity of bacterial pustule caused by Xcg. The percentage of infected fields was 7% to 17% between 2015 and 2017. We characterized the diversity of a nationwide collection of 106 Xcg isolates based on avrBs3 banding patterns. The isolates fell into 11 groups, each represented by a type strain; only two of these were similar to isolates collected from 1999 to 2002. The diversity of Xcg strains increased and the dominant strains changed between 1999 and 2017, with three new type strains comprising 44% of the isolates examined in 2012 to 2017. Pathogenicity tests did not show evidence for a shift in the races or aggressiveness of Xcg strains. Korean soybean cultivars, including the widely-grown Daewon cultivar, were susceptible to the 11 new type strains. The cultivar CNS, which carries the rxp resistance gene, was susceptible to most type strains, including two representing 83% of the Korean Xcg strains. In contrast, Williams 82, which also carries rxp, showed resistance to at least five type strains. Collectively, these results suggest that Williams 82 has resistance loci in addition to rxp. The widespread distribution of Xcg, the high virulence of the current endemic strains, and the low resistance of most Korean soybean cultivars collectively favor widespread disease in Korea in years that are favorable to pustule development.

scholarly journals Characterization of a Variant of Xanthomonas citri subsp. citri that Triggers a Host-Specific Defense Response

2013 ◽  
Vol 103 (6) ◽  
pp. 555-564 ◽  
Author(s):  
María A. Chiesa ◽  
María F. Siciliano ◽  
Leonardo Ornella ◽  
Roxana A. Roeschlin ◽  
María A. Favaro ◽  
...  
Keyword(s):  
Defense Response ◽  
Dna Polymorphisms ◽  
Citrus Limon ◽  
Xanthomonas Citri ◽  
New Variant ◽  
Xanthan Production ◽  
Pathogenicity Tests ◽  
Citrus Bacterial Canker ◽  
Canker Development

Citrus is an economically important fruit crop that is severely afflicted by Asiatic citrus bacterial canker (CBC), a disease caused by the phytopathogen Xanthomonas citri subsp. citri (X. citri). To gain insight into the molecular epidemiology of CBC, 42 Xanthomonas isolates were collected from a range of Citrus spp. across 17 different orchards in Tucumán, Argentina and subjected to molecular, biochemical, and pathogenicity tests. Analysis of genome-specific X. citri markers and DNA polymorphisms based on repetitive elements-based polymerase chain reaction showed that all 42 isolates belonged to X. citri. Interestingly, pathogenicity tests showed that one isolate, which shares >90% genetic similarity to the reference strain X. citri T, has host range specificity. This new variant of X. citri subsp. citri, named X. citri AT, which is deficient in xanthan production, induces an atypical, noncankerous chlorotic phenotype in Citrus limon and C. paradisi and weak cankerous lesions in C. aurantifolia and C. clementina leaves. In C. limon, suppression of canker development is concomitant with an oxidative burst; xanthan is not implicated in the phenotype induced by this interaction, suggesting that other bacterial factors would be involved in triggering the defense response.

scholarly journals Characterization of Diaporthe australafricana and Diaporthe spp. Associated with Stem Canker of Blueberry in Chile

Plant Disease ◽  
2013 ◽  
Vol 97 (8) ◽  
pp. 1042-1050 ◽  
Author(s):  
Karina Elfar ◽  
René Torres ◽  
Gonzalo A. Díaz ◽  
Bernardo A. Latorre
Keyword(s):  
Elongation Factor ◽  
Morphological Characteristics ◽  
Stem Canker ◽  
Translation Elongation ◽  
Pathogenicity Tests ◽  
Type Strains ◽  
Elongation Factor 1 ◽  
Highly Virulent ◽  
Study Species

Stem canker and dieback are important factors that limit the longevity and reduce the yield of blueberry (Vaccinium spp.) in Chile. In this study, species of Diaporthe associated with blueberry were isolated and identified. The internal transcribed spacer (ITS) regions of ribosomal DNA of 30 isolates and the translation elongation factor 1-α (EF1-α) of 14 isolates were sequenced, analyzed, and compared with their morphological and pathological characteristics. The molecular analysis of ITS sequences by alignment with those of ex-type strains deposited in GenBank and morphological characteristics allowed the identification of Diaporthe ambigua, D. australafricana, D. neotheicola, D. passiflorae, and Diaporthe sp. 1. However, morphology alone was insufficient to identify these species. The combined analysis of ITS and EF1-α gene sequences grouped the Chilean blueberry isolates in the same five groups obtained in the ITS analysis. Pathogenicity tests conducted with attached and detached blueberry shoots (<1 year old) and stems (1 to 2 years old) confirmed that isolates of these Diaporthe spp. were pathogenic. The symptoms were reproducible and consisted of necrotic reddish-brown cankers on blueberry shoots and stems. These isolates were capable of infecting blueberry fruit, causing a soft decay, suggesting that they were tissue nonspecific and were also pathogenic on shoots of apple, grapevine, and pear. D. australafricana was the most frequently isolated species and D. ambigua, D. australafricana, and D. passiflorae were highly virulent in shoots, stems, and fruit of blueberry. This study showed that at least four species of Diaporthe are primary pathogens, capable of causing stem canker symptoms on blueberry, and this is the first report of D. ambigua, D. neotheicola, and D. passiflorae attacking this host.

Characterization of a new type of mead fermented with Cannabis sativa L. (hemp)

2021 ◽  
Author(s):  
Raffaele Romano ◽  
Alessandra Aiello ◽  
Lucia De Luca ◽  
Rosario Sica ◽  
Emilio Caprio ◽  
...  
Keyword(s):  
Cannabis Sativa ◽  
New Type

scholarly journals Characterization of a Cytotoxic Factor in Culture Filtrates of Serratia marcescens

2002 ◽  
Vol 70 (3) ◽  
pp. 1121-1128 ◽  
Author(s):  
Kent B. Marty ◽  
Christopher L. Williams ◽  
Linda J. Guynn ◽  
Michael J. Benedik ◽  
Steven R. Blanke
Keyword(s):  
Cytotoxic Activity ◽  
Serratia Marcescens ◽  
Mammalian Cells ◽  
Divalent Cations ◽  
Recombinant Expression ◽  
Cytotoxic Factor ◽  
Culture Filtrates ◽  
Type Strains

ABSTRACT Serratia marcescens culture filtrates have been reported to be cytotoxic to mammalian cells. Using biochemical and genetic approaches, we have identified a major source of this cytotoxic activity. Both heat and protease treatments abrogated the cytotoxicity of S. marcescens culture filtrates towards HeLa cells, suggesting the involvement of one or more protein factors. A screen for in vitro cytotoxic activity revealed that S. marcescens mutant strains that are deficient in production of a 56-kDa metalloprotease are significantly less cytotoxic to mammalian cells. Cytotoxicity was significantly reduced when culture filtrates prepared from wild-type strains were pretreated with either EDTA or 1,10-phenanthroline, which are potent inhibitors of the 56-kDa metalloprotease. Furthermore, cytotoxic activity was restored when the same culture filtrates were incubated with zinc divalent cations, which are essential for enzymatic activity of the 56-kDa metalloprotease. Finally, recombinant expression of the S. marcescens 56-kDa metalloprotease conferred a cytotoxic phenotype on the culture filtrates of a nonpathogenic Escherichia coli strain. Collectively, these data suggest that the 56-kDa metalloprotease contributes significantly to the in vitro cytotoxic activity commonly observed in S. marcescens culture filtrates.

Characterization of the Generalized Pólya Process and its Applications

2014 ◽  
Vol 46 (4) ◽  
pp. 1148-1171 ◽  
Author(s):  
Ji Hwan Cha
Keyword(s):  
Joint Distribution ◽  
Arrival Times ◽  
Stochastic Intensity ◽  
Polya Process ◽  
New Type ◽  
Compound Process ◽  
Pólya Process

In this paper some important properties of the generalized Pólya process are derived and their applications are discussed. The generalized Pólya process is defined based on the stochastic intensity. By interpreting the defined stochastic intensity of the generalized Pólya process, the restarting property of the process is discussed. Based on the restarting property of the process, the joint distribution of the number of events is derived and the conditional joint distribution of the arrival times is also obtained. In addition, some properties of the compound process defined for the generalized Pólya process are derived. Furthermore, a new type of repair is defined based on the process and its application to the area of reliability is discussed. Several examples illustrating the applications of the obtained properties to various areas are suggested.

Characterization of a new type of molybdenum cofactor-mutant in cell cultures of Nicotiana tabacum

1984 ◽  
Vol 195 (1-2) ◽  
pp. 186-189 ◽  
Author(s):  
Ralf R. Mendel ◽  
Roger J. Buchanan ◽  
John L. Wray
Keyword(s):  
Nicotiana Tabacum ◽  
Cell Cultures ◽  
Molybdenum Cofactor ◽  
New Type

scholarly journals Partial purification and characterization of an endo-α-N-acetylgalactosaminidase from the culture medium of Streptomyces sp. OH-11242

1992 ◽  
Vol 288 (2) ◽  
pp. 475-482 ◽  
Author(s):  
I Ishii-Karakasa ◽  
H Iwase ◽  
K Hotta ◽  
Y Tanaka ◽  
S Omura
Keyword(s):  
Enzyme Activity ◽  
Culture Medium ◽  
Gel Filtration ◽  
Partial Purification ◽  
Gastric Mucus ◽  
Purification And Characterization ◽  
Streptomyces Sp ◽  
Optimum Ph ◽  
New Type

For the purification of a new type of endo-alpha-N-acetylgalactosaminidase from the culture medium of Streptomyces sp. OH-11242 (endo-GalNAc-ase-S) [Iwase, Ishii, Ishihara, Tanaka, Omura & Hotta (1988) Biochem. Biophys. Res. Commun. 151, 422-428], a method for assaying enzyme activity was established. Using purified pig gastric mucus glycoprotein (PGM) as the substrate, oligosaccharides liberated from PGM were pyridylaminated, and the reducing terminal sugars of oligosaccharides larger than Gal beta 1-3GalNAc were analysed by h.p.1.c. The crude enzyme of endo-GalNAc-ase-S was prepared as an 80% (w/v) ammonium sulphate precipitate from the concentrated culture medium. The enzyme was partially purified by gel chromatofocusing and subsequent DEAE-Toyopearl chromatography. Endo-enzyme activity eluted around pI 4.8 on a gel chromatofocusing column and eluted with 0.19-0.25 M-NaCl on a DEAE-Toyopearl column. In the enzyme fraction obtained, no exo-glycosidases or proteases could be detected. The molecular mass of the enzyme was estimated as 105 kDa by gel filtration, and the optimum pH was 5.5. Endo-GalNAc-ase-S hydrolysed the O-glycosidic linkage between GalNAc and Ser (Thr) in 3H-labelled and unlabelled asialofetuin, liberating both the disaccharide (Gal beta 1-3GalNAc) and the tetrasaccharide [Gal beta 1-3 (Gal beta 1-4GlcNAc beta 1-6)GalNAc]. When endo-alpha-N-acetylgalactosaminidase from Alcaligenes sp. (endo-GalNac-ase-A) was incubated with 3H-labelled and unlabelled asialofetuin, only the disaccharide (Gal beta 1-3GalNAc) was liberated.

Synthesis and Characterization of Foamed Cassava Starch Material

2012 ◽  
Vol 262 ◽  
pp. 405-409
Author(s):  
Yang Liu ◽  
Shan Shan Li ◽  
Xin Yan Yang ◽  
Chong Xing Huang
Keyword(s):  
Reaction Time ◽  
Cassava Starch ◽  
Synthesis And Characterization ◽  
Compression Stress ◽  
Static Compression ◽  
Foaming Agent ◽  
New Type ◽  
Analysis System ◽  
Central Composite

A new-type foam composites were fabricated by baking method from a mixture of cassava starch. A central composite design was constructed using the software Statistics Analysis System 9.0 to evaluate the static compression stress of foamed material. The optimum dosages of adhesive, foaming agent, catalyst were 2.0g, 6.0g, 2.4g, respectively; reaction temperature 65°C; reaction time 16 hour.

Characterization of the Role of the FluG Protein in Asexual Development of Aspergillus nidulans

Genetics ◽  
2001 ◽  
Vol 158 (3) ◽  
pp. 1027-1036 ◽  
Author(s):  
Cletus A D'Souza ◽  
Bee Na Lee ◽  
Thomas H Adams
Keyword(s):  
Aspergillus Nidulans ◽  
Negative Influence ◽  
Asexual Development ◽  
Wild Type ◽  
Significant Similarity ◽  
Developmental Defects ◽  
Asexual Sporulation ◽  
Type Strains

Abstract We showed previously that a ΔfluG mutation results in a block in Aspergillus nidulans asexual sporulation and that overexpression of fluG activates sporulation in liquid-submerged culture, a condition that does not normally support sporulation of wild-type strains. Here we demonstrate that the entire N-terminal region of FluG (∼400 amino acids) can be deleted without affecting sporulation, indicating that FluG activity resides in the C-terminal half of the protein, which bears significant similarity with GSI-type glutamine synthetases. While FluG has no apparent role in glutamine biosynthesis, we propose that it has an enzymatic role in sporulation factor production. We also describe the isolation of dominant suppressors of ΔfluG(dsg) that should identify components acting downstream of FluG and thereby define the function of FluG in sporulation. The dsgA1 mutation also suppresses the developmental defects resulting from ΔflbA and dominant activating fadA mutations, which both cause constitutive induction of the mycelial proliferation pathway. However, dsgA1 does not suppress the negative influence of these mutations on production of the aflatoxin precursor, sterigmatocystin, indicating that dsgA1 is specific for asexual development. Taken together, our studies define dsgA as a novel component of the asexual sporulation pathway.

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