Soil fungal communities shaped under the influence of organic fertilization

Author(s):  
Bożena Cwalina-Ambroziak ◽  
Jadwiga Wierzbowska
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
N. Chemidlin Prévost-Bouré ◽  
B. Karimi ◽  
S. Sadet-Bourgeteau ◽  
C. Djemiel ◽  
M. Brie ◽  
...  

AbstractThe specificity of dairy Protected Designation of Origin (PDO) products is related to their “terroir” of production. This relationship needs better understanding for efficient and sustainable productions preserving the agroecological equilibrium of agroecosystems, especially grasslands. Specificity of PDO Comté cheese was related to the diversity of natural raw milk bacterial communities, but their sources need to be determined. It is hypothesized that raw milk indigenous microbial communities may originate from permanent grazed grasslands by the intermediate of dairy cows according to the sequence soil–phyllosphere–teat–milk. This hypothesis was evaluated on a 44 dairy farms network across PDO Comté cheese area by characterizing prokaryotic and fungal communities of these compartments by metabarcoding analysis (16S rRNA gene: V3–V4 region, 18S rRNA gene: V7–V8 region). Strong and significant links were highlighted between the four compartments through a network analysis (0.34 < r < 0.58), and were modulated by soil pH, plant diversity and elevation; but also by farming practices: organic fertilization levels, cattle intensity and cow-teat care. This causal relationship suggests that microbial diversity of agroecosystems is a key player in relating a PDO product to its “terroir”; this under the dependency of farming practices. Altogether, this makes the “terroir” even more local and needs to be considered for production sustainability.


2018 ◽  
Vol 129 ◽  
pp. 43-51 ◽  
Author(s):  
Katarzyna Gleń-Karolczyk ◽  
Elżbieta Boligłowa ◽  
Jacek Antonkiewicz

2017 ◽  
Vol 112 ◽  
pp. 42-50 ◽  
Author(s):  
Jichen Wang ◽  
Yang Song ◽  
Tengfei Ma ◽  
Waseem Raza ◽  
Jing Li ◽  
...  

2019 ◽  
Author(s):  
Coline Deveautour ◽  
Suzanne Donn ◽  
Sally Power ◽  
Kirk Barnett ◽  
Jeff Powell

Future climate scenarios predict changes in rainfall regimes. These changes are expected to affect plants via effects on the expression of root traits associated with water and nutrient uptake. Associated microorganisms may also respond to these new precipitation regimes, either directly in response to changes in the soil environment or indirectly in response to altered root trait expression. We characterised arbuscular mycorrhizal (AM) fungal communities in an Australian grassland exposed to experimentally altered rainfall regimes. We used Illumina sequencing to assess the responses of AM fungal communities associated with four plant species sampled in different watering treatments and evaluated the extent to which shifts were associated with changes in root traits. We observed that altered rainfall regimes affected the composition but not the richness of the AM fungal communities, and we found distinctive communities in the increased rainfall treatment. We found no evidence of altered rainfall regime effects via changes in host physiology because none of the studied traits were affected by changes in rainfall. However, specific root length was observed to correlate with AM fungal richness, while concentrations of phosphorus and calcium in root tissue and the proportion of root length allocated to fine roots were correlated to community composition. Our study provides evidence that climate change and its effects on rainfall may influence AM fungal community assembly, as do plant traits related to plant nutrition and water uptake. We did not find evidence that host responses to altered rainfall drive AM fungal community assembly in this grassland ecosystem.


2019 ◽  
Author(s):  
Coline Deveautour ◽  
Sally Power ◽  
Kirk Barnett ◽  
Raul Ochoa-Hueso ◽  
Suzanne Donn ◽  
...  

Climate models project overall a reduction in rainfall amounts and shifts in the timing of rainfall events in mid-latitudes and sub-tropical dry regions, which threatens the productivity and diversity of grasslands. Arbuscular mycorrhizal fungi may help plants to cope with expected changes but may also be impacted by changing rainfall, either via the direct effects of low soil moisture on survival and function or indirectly via changes in the plant community. In an Australian mesic grassland (former pasture) system, we characterised plant and arbuscular mycorrhizal (AM) fungal communities every six months for nearly four years to two altered rainfall regimes: i) ambient, ii) rainfall reduced by 50% relative to ambient over the entire year and iii) total summer rainfall exclusion. Using Illumina sequencing, we assessed the response of AM fungal communities sampled from contrasting rainfall treatments and evaluated whether variation in AM fungal communities was associated with variation in plant community richness and composition. We found that rainfall reduction influenced the fungal communities, with the nature of the response depending on the type of manipulation, but that consistent results were only observed after more than two years of rainfall manipulation. We observed significant co-associations between plant and AM fungal communities on multiple dates. Predictive co-correspondence analyses indicated more support for the hypothesis that fungal community composition influenced plant community composition than vice versa. However, we found no evidence that altered rainfall regimes were leading to distinct co-associations between plants and AM fungi. Overall, our results provide evidence that grassland plant communities are intricately tied to variation in AM fungal communities. However, in this system, plant responses to climate change may not be directly related to impacts of altered rainfall regimes on AM fungal communities. Our study shows that AM fungal communities respond to changes in rainfall but that this effect was not immediate. The AM fungal community may influence the composition of the plant community. However, our results suggest that plant responses to altered rainfall regimes at our site may not be resulting via changes in the AM fungal communities.


2018 ◽  
Vol 5 (2) ◽  
pp. 37-51 ◽  
Author(s):  
O. Demydenko ◽  
Yu. Zapasna ◽  
V. Velychko

Aim. To substantiate the agroecological estimation of the performance of a short crop rotation in conditions of intense and organic system of fertilization on the basis of restoring normative parameters of emission and se- questration of С-СО 2 circulation while using by-products as organic fertilizers in conditions of modern climatic system of the Forest-Steppe of Ukraine. Methods. Field, statistical, laboratory. Results of Investigations. The performance of short crop rotations is determined by the capacity of С-СО 2 balance. Strong inverse correla- tion was found between the capacity of N and the ratio between C and N in the agrocenosis, which demon- strated that enhancing the humifi cation processes (ratio constriction) led to the increase in the capacity of С org balance and the decrease in the capacity level of С-СО 2 balance (enhancing mineralization), related to the reduction in the performance of crops in the agrocenosis of a crop rotation compared to the organic system of fertilization. The capacity of С-СО 2 and С org balance correlates at the medium level of inverse direction, and the yield of the main products, feed units and digestible protein correlates at the level of strong direct correlation. Conclusions. General mineralization of by-products and humus in the agrocenosis and humifi cation processes are antagonists, so extending the ratio between С and N at the intense fertilization system stimulates the in- crease in performance and reducing С to N similar to the organic fertilization system enhances the humifi cation process due to binding of С org into humus and limits mineralization which leads to the reduction in agrocenosis performance at the organic fertilization system.


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