Two New Penicillium Species Penicillium Dongtaiense Sp. Nov and Penicillium Yanchengense sp. nov., Isolated From a Poplar Plantation in China

Studies on the degradation of plant cell wall polysaccharides by fungal extracellular enzymes have attracted much recent attention. In this study, dozens of fungus species spanning genera were isolated from rotting leaves based on their ability to decompose xylan. Using genetic sequencing (rDNA internal transcribed spacer), strains were identified as members of the genera Aspergillus, Penicillium, Alternaria, Campylocarpon, Pyrenochaeta and Cladosporium. Among these strains, two Penicillium strains can’t be assigned to any reported species. In this study, they are described new species as Penicillium yanchengium sp. novT (AF 2021051) and Penicillium dongtaiense sp. novT (AF 2121001) based on multigene phylogenetic analysis and morphology. Penicillium yanchengense sp. novT belong to Penicillium section Lanata-Divaricata and are phylogenetically closely related to Penicillium oxalicum and Penicillium asturianum. Isolates of Penicillium yanchengense sp. novT have a faster growth on Czapek yeast agar (CYA) at 37 ℃, abundant exudate present on CYA, and a greater ability to produce acid on creatine sucrose agar (CREA). Penicillium dongtaiense sp. novT was placed in section Sclerotiora and it is most closely related to Penicillium exsudans, Penicillium mallochii and Penicillium acidum. It is unique in slower growth on CYA and MEA plates, abundant exudate on MEA, and cerebriform grooves on YES compared to its relatives. In this study, we provide detailed description about two species.

Extracting Canopy Closure by the CHM-Based and SHP-Based Methods with a Hemispherical FOV from UAV-LiDAR Data in a Poplar Plantation

Canopy closure (CC), a useful biophysical parameter for forest structure, is an important indicator of forest resource and biodiversity. Light Detection and Ranging (LiDAR) data has been widely studied recently for forest ecosystems to obtain the three-dimensional (3D) structure of the forests. The components of the Unmanned Aerial Vehicle LiDAR (UAV-LiDAR) are similar to those of the airborne LiDAR, but with higher pulse density, which reveals more detailed vertical structures. Hemispherical photography (HP) had proven to be an effective method for estimating CC, but it was still time-consuming and limited in large forests. Thus, we used UAV-LiDAR data with a canopy-height-model-based (CHM-based) method and a synthetic-hemispherical-photography-based (SHP-based) method to extract CC from a pure poplar plantation in this study. The performance of the CC extraction methods based on an angular viewpoint was validated by the results of HP. The results showed that the CHM-based method had a high accuracy in a 45° zenith angle range with a 0.5 m pixel size and a larger radius (i.e., k = 2; R2 = 0.751, RMSE = 0.053), and the accuracy declined rapidly in zenith angles of 60° and 75° (R2 = 0.707, 0.490; RMSE = 0.053, 0.066). In addition, the CHM-based method showed an underestimate for leaf-off deciduous trees with low CC. The SHP-based method also had a high accuracy in a 45° zenith angle range, and its accuracy was stable in three zenith angle ranges (R2: 0.688, 0.674, 0.601 and RMSE = 0.059, 0.056, 0.058 for a 45°, 60° and 75° zenith angle range, respectively). There was a similar trend of CC change in HP and SHP results with the zenith angle range increase, but there was no significant change with the zenith angle range increase in the CHM-based method, which revealed that it was insensitive to the changes of angular CC compared to the SHP-based method. However, the accuracy of both methods showed differences in plantations with different ages, which had a slight underestimate for 8-year-old plantations and an overestimate for plantations with 17 and 20 years. Our research provided a reference for CC estimation from a point-based angular viewpoint and for monitoring the understory light conditions of plantations.

Long-Term Nitrogen Deposition Alters Ectomycorrhizal Community Composition and Function in a Poplar Plantation

The continuous upsurge in soil nitrogen (N) enrichment has had strong impacts on the structure and function of ecosystems. Elucidating how plant ectomycorrhizal fungi (EMF) mutualists respond to this additional N will facilitate the rapid development and implementation of more broadly applicable management and remediation strategies. For this study, we investigated the responses of EMF communities to increased N, and how other abiotic environmental factors impacted them. Consequently, we conducted an eight-year N addition experiment in a poplar plantation in coastal eastern China that included five N addition levels: 0 (N0), 50 (N1), 100 (N2), 150 (N3), and 300 (N4) kg N ha−1 yr−1. We observed that excessive N inputs reduced the colonization rate and species richness of EMF, and altered its community structure and functional traits. The total carbon content of the humus layer and available phosphorus in the mineral soil were important drivers of EMF abundance, while the content of ammonium in the humus layer and mineral soil determined the variations in the EMF community structure and mycelium foraging type. Our findings indicated that long-term N addition induced soil nutrient imbalances that resulted in a severe decline in EMF abundance and loss of functional diversity in poplar plantations.

Bacteria associated with vascular wilt of poplar

In 2017, a 560-ha area of hybrid poplar plantation in northern Poland showed symptoms of tree decline. Leaves appeared smaller, turned yellow–brown, and were shed prematurely. Twigs and smaller branches died. Bark was sunken and discolored, often loosened and split. Trunks decayed from the base. Phloem and xylem showed brown necrosis. Ten per cent of trees died in 1–2 months. None of these symptoms was typical for known poplar diseases. Bacteria in soil and in the necrotic base of poplar trunk were analyzed with Illumina sequencing. Soil and wood were colonized by at least 615 and 249 taxa. The majority of bacteria were common to soil and wood. The most common taxa in soil were: Acidobacteria (14.76%), Actinobacteria (14.58%), Proteobacteria (36.87) with Betaproteobacteria (6.52%), (6.10%), Comamonadaceae (2.79%), and Verrucomicrobia (5.31%).The most common taxa in wood were: Bacteroidetes (22.72%) including Chryseobacterium (5.07%), Flavobacteriales (10.87%), Sphingobacteriales (9.40%) with Pedobacter cryoconitis (7.31%), Proteobacteria (73.79%) with Enterobacteriales (33.25%) including Serratia (15.30%) and Sodalis (6.52%), Pseudomonadales (9.83%) including Pseudomonas (9.02%), Rhizobiales (6.83%), Sphingomonadales (5.65%), and Xanthomonadales (11.19%). Possible pathogens were Pseudomonas, Rhizobium and Xanthomonas. The potential initial, endophytic character of bacteria is discussed. Soil and possibly planting material might be the reservoir of pathogen inoculum.

Bacteria associated with vascular wilt of poplar

In 2017, the 560-ha area of hybrid poplar plantation in northern Poland showed symptoms of tree decline. Leaves appeared smaller, turned yellow-brown, and were shed prematurely. Twigs and smaller branches died. Bark was sunken and discolored, often loosened and split. Trunks decayed from the base. Phloem and xylem showed brown necrosis. Ten per cent of trees died in 1–2 months. None of these symptoms was typical for known poplar diseases. Bacteria in soil and the necrotic base of poplar trunk were analysed with Illumina sequencing. Soil and wood were colonized by at least 615 and 249 taxa. The majority of bacteria were common to soil and wood. The most common taxa in soil were: Acidobacteria (14.757%), Actinobacteria (14.583%), Proteobacteria (36.872) with Betaproteobacteria (6.516%), Burkholderiales (6.102%), Comamonadaceae (2.786%), and Verrucomicrobia (5.307%).The most common taxa in wood were: Bacteroidetes (22.722%) including Chryseobacterium (5.074%), Flavobacteriales (10.873%), Sphingobacteriales (9.396%) with Pedobacter cryoconitis (7.306%), Proteobacteria (73.785%) with Enterobacteriales (33.247%) including Serratia (15.303%) and Sodalis (6.524%), Pseudomonadales (9.829%) including Pseudomonas (9.017%), Rhizobiales (6.826%), Sphingomonadales (5.646%), and Xanthomonadales (11.194%). Possible pathogens were Pseudomonas, Rhizobium and Xanthomonas. The initially endophytic character of bacteria is emphasized. Soil and possibly planting material might be the sources of pathogen inoculum.

Comparison of C:N:P Stoichiometry in the Plant–Litter–Soil System Between Poplar and Elm Plantations in the Horqin Sandy Land, China

Afforestation is among the most effective means of preventing and controlling desertification. Silver poplar (Populus alba) is commonly planted tree species for afforestation of the Horqin Sandy Land of China. However, this species has exhibited some drawbacks such as top shoot dieback, premature senescence and mortality, and soil and ecosystems degradation. In contrast, Siberian elm (Ulmus pumila) rarely experiences these problems in the same regions. Ecological stoichiometry plays a vital role in exploring ecological processes and nutrient cycle relationships in plant–litter–soil systems. To explore the differences in the carbon (C), nitrogen (N), and phosphorus (P) balance, the stoichiometry characteristics and stoichiometric homeostasis in elm and poplar plantations in the Horqin Sandy Land, we measured C, N, and P concentrations in leaves, branches, roots, litter, and soils and analyzed N and P resorption efficiencies in the two plantations. The results showed that soil C and N concentrations, C:P, and N:P were greater in the elm plantation than in the poplar plantation. The leaf and root C:P and N:P during summer and litter N and P concentrations were greater, whereas N and P resorption efficiencies were lower, in the elm plantation than in the poplar plantation. Generally, elm exhibited greater N:P homeostasis than poplar. N and N:P homeostasis were greater in roots than in leaves and branches in the elm plantation, but they varied with soil N concentration and N:P in the poplar plantation. These findings indicate that poplar exhibited more developed internal nutrient conservation and allocation strategies but poor nutrient accumulation in soil, which may contribute to degradation of poplar plantation. In contrast, elm tended to return more nutrients to the soil, showing an improved nutrient cycle in the plant–litter–soil system and increased soil C and N accumulation in the elm plantation. Therefore, compared with poplar, elm may be a more suitable afforestation tree species for the Horqin Sandy Land, in terms of promoting the accumulation of soil nutrients and enhancing nutrient cycling in the plant–litter–soil system.

Atmospheric Aerosols Elevated Ecosystem Productivity of a Poplar Plantation in Beijing, China

Atmospheric aerosols can influence energy allocation, environmental factors and thus canopy photosynthesis. However, the regulations of aerosol effect on ecosystem productivity are not well understood. Here, we applied aerosols optical properties to quantify the effects of aerosol type and concentration on the environmental factors and associated gross primary productivity (GPP) of a poplar (Populus sp.) plantation during June to August from 2014 to 2016 in Beijing, China. As AOD increased from 0 to 2.5, total photosynthetically active radiation (PAR) decreased by 29%, while the diffuse PAR increased by 39%. Although there was no significant impact of aerosols on air temperature (p > 0.05), aerosols decreased vapor pressure deficit by more than 40%. We found that the plantation GPP changed exponentially with AOD, indicating that aerosols elevated GPP by about 37% under severe aerosol pollution (AOD ≥ 1) compared with background aerosol (AOD < 0.4). Aerosols type also had a significant effect on GPP. We concluded that aerosols could increase the GPP of the poplar plantation and the promotion effect of aerosol on poplar plantation would not be significantly reduction until AOD < 1 under the projected decrease in aerosol loading in the future.