Data on the long-distance dispersal of Laxmann's shrew (Sorex caecutiens Laxmann, 1788) and the pygmy shrew (Sorex minutus Linnaeus, 1766)

We studied the long-distance dispersal of two species of shrews – Laxmann's shrew (Sorex caecutiens) and the pygmy shrew (Sorex minutus). Group marking with bait containing rhodamine B was used. These were the first data obtained on the long-distance movements of the pygmy shrew (n = 5), which extended from 475 m to 2570 m in a straight line. In the course of dispersion, Laxmann's shrews (n = 12) moved distances of up to 4500 m, which is the maximum movement distance known for this species.

Commensals of underground mammals: European mole (Talpa europaea, Eulipotyphla, Talpidae) and the greater mole-rat (Spalax microphthalmus, Rodentia, Spalacidae)

Stepanova I, Andreychev A, Kulakhmetov R, Lobachev E. 2021. Commensals of underground mammals: European mole (Talpa europaea, Eulipotyphla, Talpidae) and the greater mole-rat (Spalax microphthalmus, Rodentia, Spalacidae). Biodiversitas 22: 4665-4670. The study of lodgers of burrows of underground mammals was carried out using the method of hunting cylinders (cans). In the study, 29 different representatives from the following classes were identified in the courses of the greater mole-rat and European mole: Diplopoda, Chilopoda, Gastropoda, Insecta, Amphibia, and Mammalia. Among the vertebrates captured are Eurasian common shrew (Sorex araneus), Eurasian pygmy shrew (Sorex minutus), bank vole (Clethrionomys glareolus), common spadefoot toad (Pelobates fuscus), moor frog (Rana arvalis), and common toad (Bufo bufo). Twenty-six different species have been identified among invertebrates. Many animals seek shelter in the burrows of underground mammals from enemies and adverse climatic factors for food or conditions for reproduction. In the central part of Russia, more species of commensals were found in European mole burrows (29) than in greater mole-rat burrows (21).

Prevalence of Hantaviruses Harbored by Murid Rodents in Northwestern Ukraine and Discovery of a Novel Puumala Virus Strain

In Europe, two species of hantaviruses, Puumala orthohantavirus (PUUV) and Dobrava orthohantavirus (DOBV), cause hemorrhagic fever with renal syndrome in humans. The rodent reservoirs for these viruses are common throughout Ukraine, and hence, the goal of this study was to identify the species and strains of hantaviruses circulating in this region. We conducted surveillance of small rodent populations in a rural region in northwestern Ukraine approximately 30 km from Poland. From the 424 small mammals captured, we identified nine species, of which the most abundant were Myodes glareolus, the bank vole (45%); Apodemus flavicollis, the yellow-necked mouse (29%); and Apodemus agrarius, the striped field mouse (14.6%) Using an indirect immunofluorescence assay, 15.7%, 20.5%, and 33.9% of the sera from M. glareolus, A. glareolus, and A. flavicollis were positive for hantaviral antibodies, respectively. Additionally, we detected antibodies to the hantaviral antigen in one Microtus arvalis, one Mus musculus, and one Sorex minutus. We screened the lung tissue for hantaviral RNA using next-generation sequencing and identified PUUV sequences in 25 small mammals, including 23 M. glareolus, 1 M. musculus, and 1 A. flavicollis, but we were unable to detect DOBV sequences in any of our A. agrarius specimens. The percent identity matrix and Bayesian phylogenetic analyses of the S-segment of PUUV from 14 M. glareolus lungs suggest the highest similarity (92–95% nucleotide or 99–100% amino acid) with the Latvian lineage. This new genetic information will contribute to future molecular surveillance of human cases in Ukraine.

Distribution of Small Mammals (Eulipotyphla, Rodentia) in the Gradient Direction Urban–Suburban–Rural of Central Slovakia

Changes in the structure of small mammals’ communities (Eulipotyphla, Rodentia) along urban–rural gradient indicate the environmental state of stability or instability. Since small mammals are important with regard to the transmission of diseases to man and domestic animals, therefore knowledge of their association with the landscape structure is needed in land use planning. In course of the period from 2015 to 2017, there were recorded 109 individuals belonging to 15 species at 9 study sites (3 rural, 3 suburban, and 3 urban). We recorded a decrease in the average number of species in the direction of the suburban–urban–rural gradient. The number of individuals decreased in the rural–urban–suburban gradient. Eudominant species Clethrionomys glareolus (D = 20.2%), Microtus arvalis (13.8%), and Sorex araneus (19.3%) preferred the close links between the terms of the rural landscape, while Apodemus agrarius (D = 11.9%) and Sorex minutus (D = 11.0%) preferred the close links between the terms of the urban landscape.

Primer biases in the molecular assessment of diet in multiple insectivorous mammals

Our understanding of trophic interactions of small insectivorous mammals has been drastically improved with the advent of DNA metabarcoding. The technique has continued to be optimised over the years, with primer choice repeatedly being a vital factor for dietary inferences. However, the majority of dietary studies examining the effect of primer choice often rely on in silico analyses or comparing between species that occupy an identical niche type. Here, we apply DNA metabarcoding to empirically compare the prey detection capabilities of two widely used primer sets when assessing the diets of a flying (lesser horseshoe bat; Rhinolophus hipposideros) and two ground-dwelling insectivores (greater white-toothed shrew; Crocidura russula and pygmy shrew; Sorex minutus). Although R. hipposideros primarily rely on two prey orders (Lepidoptera and Diptera), the unique taxa detected by each primer shows that a combination of primers may be the best approach to fully describe bat trophic ecology. However, random forest classifier analysis suggests that one highly degenerate primer set detected the majority of both shrews’ diet despite higher levels of host amplification. The wide range of prey consumed by ground-dwelling insectivores can therefore be accurately documented from using a single broad-range primer set, which can decrease cost and labour. The results presented here show that dietary inferences will differ depending on the primer or primer combination used for insectivores occupying different niches (i.e., hunting in the air or ground) and demonstrate the importance of performing empirical pilot studies for novel study systems.

Primer biases in the molecular assessment of diet in multiple insectivorous mammals

Our understanding of trophic interactions of small insectivorous mammals has been drastically improved with the advent of DNA metabarcoding. The technique has continued to be optimised over the years, with primer choice repeatedly being a vital factor for dietary inferences. However, the majority of dietary studies examining the effect of primer choice often rely on in silico analyses or comparing single-niche species. Here we apply DNA metabarcoding to empirically compare the prey detection capabilities of two widely used primer sets when assessing the diets of a flying (lesser horseshoe bat; Rhinolophus hipposideros) and two ground dwelling insectivores (greater white-toothed shrew; Crocidura russula and pygmy shrew; Sorex minutus). Although R. hipposideros primarily rely on two prey orders (Lepidoptera and Diptera), the unique taxa detected by each primer shows that a combination of primers may be the best approach to fully describe bat trophic ecology. However, random forest classifier analysis suggest that one highly degenerate primer set detected the majority of both shrews’ diet despite higher levels of host amplification. The wide range of prey consumed by ground-dwelling insectivores can therefore be accurately documented from using a single broad-range primer set, which can decrease cost and labour. The results presented here show that dietary inferences will differ depending on the primer or primer combination used for insectivores occupying different niches (i.e. hunting in the air or ground) and demonstrate the importance of performing empirical pilot studies for novel study systems.

Research into the mammal fauna of the Sviatoshynsko-Bilychansky forest within the Holosiivsky National Nature Park

In 2017–2019, a survey of the mammal faune of the Sviatoshynsko-Bilychansky forest, which is located nearby to the northwestern outskirts of Kyiv, was carried out. The following species of mammals were recorded: Neomys fodiens, Neomys anomalus, Sorex araneus, Sorex minutus, Talpa europaea, Erinaceus concolor, Alces alces, Capreolus capreolus, Sus scrofa, Lepus europaeus, Sciurus vulgaris, Castor fiber, Ondatra zibeticus, Muscardinus avellanarius, Apodemus agrarius, Sylvaemus flavicollis, Sylvaemus sylvaticus, Micromys minutus, Clethrionomys glareolus, Vulpes vulpes, Lutra lutra, Meles meles, Mustela vison, Martes martes, and Martes foina.

Finds of rare and non-abundant species of small mammals in the territory of Kharkiv Oblast, Ukraine

Eight of the eleven expected rare and non-abundant species of small mammals were recorded in the studied territory: Crocidura suaveolens, Sorex minutus, Neomys fodiens, Dryomys nitedula, Cricetulus migratorius, Terricola subterraneus, Micromys minutus, and Mus spicilegus. Crocidura suaveolens was found in both dry meadows and floodplain biotopes, and it was also recorded nearby to field-protective plantations and human settlements. Sorex minutus was also more common in dry meadows and in floodplain biotopes. Neomys fodiens is a typical floodplain endemic. Dryomys nitedula was more common in oak forests and it is prone to synanthropy. Cricetulus migratorius was found in steppe areas and near fields of agricultural crops. Terricola subterraneus was recorded only in a dry maple-linden oak forest. Micromys minutus prefers floodplain biotopes. Mus spicilegus was found on agricultural crops and in steppe areas.

Mouse-like rodents and shrews in Kharkiv Oblast (Ukraine): species composition, distribution, and current state of populations

Since 1957, zoologists of the Kharkiv Sanitary and Epidemiological Station have been conducting annual monitoring of small mammals in Kharkiv Oblast. To assess the current state of populations of mouse-like rodents and shrews, we analysed a dataset for the period from 2000 to 2018. The small mammal fauna was studied at 117 sites in 27 districts (raions) of Kharkiv Oblast. Various types of oak forests, dry and floodplain meadows, riparian vegetation, steppe areas, forest stripes, gardens, fields, and haystacks were examined. Four species of insectivores and 16 species of mouse-like rodents were identified. The dominant and widespread species in the region are Sylvaemus uralensis, Apodemus agrarius, Sorex araneus, Microtus levis, Myodes glareolus, and Sylvaemus tauricus. Some species are less common and in some areas of the region have not yet been identified, including Sorex minutus, Sylvaemus sylvaticus, Crocidura suaveolens, Micromys minutus, Cricetulus migratorius, and Microtus oeconomus. The least common species with single records include Neomys fodiens, Mus spicilegus, Lagurus lagurus, Terricola subterraneus, Dryomys nitedula, and Arvicola amphibius. Indigenous species of the region include seven species, another seven species are those that increased their number and range, three species have recently appeared in the region due to dispersal from adjacent territories, while, on the contrary, the abundance and range of three species have declines. Microtus oeconomus is characterised by a current southward range expansion. Myodes glareolus, which was mentioned in the last century north of our region, is now widely distributed throughout the region and further south. Lagurus lagurus is an invasive species with periodic population outbreaks in the region and currently is rarely recorded.

Smooth snake population decline and its link with prey availability

The relationship between the numbers of smooth snakes, Coronella austriaca, and common lizards, Zootoca vivipara, was investigated in a 6.5 ha area of lowland heath within Wareham Forest in southern England. With the exception of 2002 the numbers of lizards, small mammals and individual smooth snakes captured, or observed, were recorded during each of 21 annual surveys between May and October 1997-2018. Smooth snake diet was investigated annually between 2004 and 2015 by analysing faecal samples and showed that lizards, particularly the common lizard, and pigmy shrews, Sorex minutus, were important prey species. There was no significant correlation between the occurrence of any small mammal species and either snake numbers or their presence in smooth snake diet. Over the study period there was an overall decline in the number of smooth snakes captured whilst there was an overall increase in the number of common lizard sightings. The frequency of common lizards found in the diet of smooth snakes was positively correlated with their abundance within the study area. There was a significant correlation between the decline of smooth snake numbers and the subsequent increase in the number of common lizard sightings suggesting that lizard abundance may be controlled by snake numbers. Conversely, we found no evidence indicating that smooth snake numbers were dependent on lizard numbers suggesting that factors other than prey availability e.g. habitat change due to cattle grazing, blocking ground water drainage ditches, or climatic variables, were impacting on snake numbers, particularly between 2012 and 2018.