Rice Height Monitoring between Different Estimation Models Using UAV Photogrammetry and Multispectral Technology

Unmanned aerial vehicle (UAV) photogrammetry was used to monitor crop height in a flooded paddy field. Three multi-rotor UAVs were utilized to conduct flight missions in order to capture RGB (RedGreenBlue) and multispectral images, and these images were analyzed using several different models to provide the best results. Two image sets taken by two UAVs, mounted with RGB cameras of the same resolution and Global Navigation Satellite System (GNSS) receivers of different accuracies, were applied to perform photogrammetry. Two methods were then proposed for creating crop height models (CHMs), one of which was denoted as the M1 method and was based on the Digital Surface Point Cloud (DSPC) and the Digital Terrain Point Cloud (DSPT). The other was denoted as the M2 method and was based on the DSPC and a bathymetric sensor. An image set taken by another UAV mounted with a multispectral camera was used for multispectral-based photogrammetry. A Normal Differential Vegetation Index (NDVI) and a Vegetation Fraction (VF) were then extracted. A new method based on multiple linear regression (MLR) combining the NDVI, the VF, and a Soil Plant Analysis Development (SPAD) value for estimating the measured height (MH) of rice was then proposed and denoted as the M3 method. The results show that the M1 method, the UAV with a GNSS receiver with a higher accuracy, obtained more reliable estimations, while the M2 method, the UAV with a GNSS receiver of moderate accuracy, was actually slightly better. The effect on the performance of CHMs created by the M1 and M2 methods is more negligible in different plots with different treatments; however, remarkably, the more uniform the distribution of vegetation over the water surface, the better the performance. The M3 method, which was created using only a SPAD value and a canopy NDVI value, showed the highest coefficient of determination (R2) for overall MH estimation, 0.838, compared with other combinations.

Comparative effects of the combination of biofertilizer, NPK, and mycorrhizal application on maize production system

The use of uncontrolled an-organic fertilizer continuously will degrade soil fertility and nutrients balance. To minimize those impacts, biofertilizers and an-organic fertilizer are needed to maintain a sustainable maize production system. The study used a randomized complete block design with 3 replications with different levels of fertilizer application, conducted at University of Brawijaya experimental research station at Jatimulyo-Malang-East Java. Several parameters were measured to examine those effects on soil and crops. The treatments affect crop height, leaf chlorophyll indices, leaf area indices, maize yields, total number, and mycorrhizal infection. The best treatment was detected under the combination of 100% biofertilizer and 100% NPK, along with the addition of 100% microelements. The lowest was observed under mycorrhizal applications. There was a positive correlation between chlorophyll, crop height, leaf area, and maize yields.

Comparison of UAS-Based Structure-from-Motion and LiDAR for Structural Characterization of Short Broadacre Crops

The use of small unmanned aerial system (UAS)-based structure-from-motion (SfM; photogrammetry) and LiDAR point clouds has been widely discussed in the remote sensing community. Here, we compared multiple aspects of the SfM and the LiDAR point clouds, collected concurrently in five UAS flights experimental fields of a short crop (snap bean), in order to explore how well the SfM approach performs compared with LiDAR for crop phenotyping. The main methods include calculating the cloud-to-mesh distance (C2M) maps between the preprocessed point clouds, as well as computing a multiscale model-to-model cloud comparison (M3C2) distance maps between the derived digital elevation models (DEMs) and crop height models (CHMs). We also evaluated the crop height and the row width from the CHMs and compared them with field measurements for one of the data sets. Both SfM and LiDAR point clouds achieved an average RMSE of ~0.02 m for crop height and an average RMSE of ~0.05 m for row width. The qualitative and quantitative analyses provided proof that the SfM approach is comparable to LiDAR under the same UAS flight settings. However, its altimetric accuracy largely relied on the number and distribution of the ground control points.

Improving Biomass and Grain Yield Prediction of Wheat GenoTypes on Sodic Soil Using Integrated High-Resolution MultiSpectral, Hyperspectral, 3D Point Cloud, and Machine Learning Techniques

Sodic soils adversely affect crop production over extensive areas of rain-fed cropping worldwide, with particularly large areas in Australia. Crop phenotyping may assist in identifying cultivars tolerant to soil sodicity. However, studies to identify the most appropriate traits and reliable tools to assist crop phenotyping on sodic soil are limited. Hence, this study evaluated the ability of multispectral, hyperspectral, 3D point cloud, and machine learning techniques to improve estimation of biomass and grain yield of wheat genotypes grown on a moderately sodic (MS) and highly sodic (HS) soil sites in northeastern Australia. While a number of studies have reported using different remote sensing approaches and crop traits to quantify crop growth, stress, and yield variation, studies are limited using the combination of these techniques including machine learning to improve estimation of genotypic biomass and yield, especially in constrained sodic soil environments. At close to flowering, unmanned aerial vehicle (UAV) and ground-based proximal sensing was used to obtain remote and/or proximal sensing data, while biomass yield and crop heights were also manually measured in the field. Grain yield was machine-harvested at maturity. UAV remote and/or proximal sensing-derived spectral vegetation indices (VIs), such as normalized difference vegetation index, optimized soil adjusted vegetation index, and enhanced vegetation index and crop height were closely corresponded to wheat genotypic biomass and grain yields. UAV multispectral VIs more closely associated with biomass and grain yields compared to proximal sensing data. The red-green-blue (RGB) 3D point cloud technique was effective in determining crop height, which was slightly better correlated with genotypic biomass and grain yield than ground-measured crop height data. These remote sensing-derived crop traits (VIs and crop height) and wheat biomass and grain yields were further simulated using machine learning algorithms (multitarget linear regression, support vector machine regression, Gaussian process regression, and artificial neural network) with different kernels to improve estimation of biomass and grain yield. The artificial neural network predicted biomass yield (R2 = 0.89; RMSE = 34.8 g/m2 for the MS and R2 = 0.82; RMSE = 26.4 g/m2 for the HS site) and grain yield (R2 = 0.88; RMSE = 11.8 g/m2 for the MS and R2 = 0.74; RMSE = 16.1 g/m2 for the HS site) with slightly less error than the others. Wheat genotypes Mitch, Corack, Mace, Trojan, Lancer, and Bremer were identified as more tolerant to sodic soil constraints than Emu Rock, Janz, Flanker, and Gladius. The study improves our ability to select appropriate traits and techniques in accurate estimation of wheat genotypic biomass and grain yields on sodic soils. This will also assist farmers in identifying cultivars tolerant to sodic soil constraints.

Broadacre Mapping of Wheat Biomass Using Ground-Based LiDAR Technology

Crop biomass is an important attribute to consider in relation to site-specific nitrogen (N) management as critical N levels in plants vary depending on crop biomass. Whilst LiDAR technology has been used extensively in small plot-based phenomics studies, large-scale crop scanning has not yet been reported for cereal crops. A LiDAR sensing system was implemented to map a commercial 64-ha wheat paddock to assess the spatial variability of crop biomass. A proximal active reflectance sensor providing spectral indices and estimates of crop height was used as a comparison for the LiDAR system. Plant samples were collected at targeted locations across the field for the assessment of relationships between sensed and measured crop parameters. The correlation between crop biomass and LiDAR-derived crop height was 0.79, which is similar to results reported for plot scanning studies and greatly superior to results obtained for the spectral sensor tested. The LiDAR mapping showed significant crop biomass variability across the field, with estimated values ranging between 460 and 1900 kg ha−1. The results are encouraging for the use of LiDAR technology for large-scale operations to support site-specific management. To promote such an approach, we encourage the development of an automated, on-the-go data processing capability and dedicated commercial LiDAR systems for field operation.

Estimation of Winter Wheat Yield from UAV-Based Multi-Temporal Imagery Using Crop Allometric Relationship and SAFY Model

Crop yield prediction and estimation play essential roles in the precision crop management system. The Simple Algorithm for Yield Estimation (SAFY) has been applied to Unmanned Aerial Vehicle (UAV)-based data to provide high spatial yield prediction and estimation for winter wheat. However, this crop model relies on the relationship between crop leaf weight and biomass, which only considers the contribution of leaves on the final biomass and yield calculation. This study developed the modified SAFY-height model by incorporating an allometric relationship between ground-based measured crop height and biomass. A piecewise linear regression model is used to establish the relationship between crop height and biomass. The parameters of the modified SAFY-height model are calibrated using ground measurements. Then, the calibrated modified SAFY-height model is applied on the UAV-based photogrammetric point cloud derived crop height and effective leaf area index (LAIe) maps to predict winter wheat yield. The growing accumulated temperature turning points of an allometric relationship between crop height and biomass is 712 °C. The modified SAFY-height model, relative to traditional SAFY, provided more accurate yield estimation for areas with LAI higher than 1.01 m2/m2. The RMSE and RRMSE are improved by 3.3% and 0.5%, respectively.

Evaluation of Soil Properties, Topographic Metrics, Plant Height, and Unmanned Aerial Vehicle Multispectral Imagery Using Machine Learning Methods to Estimate Canopy Nitrogen Weight in Corn

Management of nitrogen (N) fertilizers is an important agricultural practice and field of research to minimize environmental impacts and the cost of production. To apply N fertilizer at the right rate, time, and place depends on the crop type, desired yield, and field conditions. The objective of this study is to use Unmanned Aerial Vehicle (UAV) multispectral imagery, vegetation indices (VI), crop height, field topographic metrics, and soil properties to predict canopy nitrogen weight (g/m2) of a corn field in southwestern Ontario, Canada. Random Forests (RF) and support vector regression (SVR) models were evaluated for canopy nitrogen weight prediction from 29 variables. RF consistently had better performance than SVR, and the top-performing validation model was RF using 15 selected height, spectral, and topographic variables with an R2 of 0.73 and Root Mean Square Error (RMSE) of 2.21 g/m2. Of the model’s 15 variables, crop height was the most important predictor, followed by 10 VIs, three MicaSense band reflectance mosaics (blue, red, and green), and topographic profile curvature. The model information can be used to improve field nitrogen prediction, leading to more effective and efficient N fertilizer management.

Normalizing the Local Incidence Angle in Sentinel-1 Imagery to Improve Leaf Area Index, Vegetation Height, and Crop Coefficient Estimations

Public domain synthetic-aperture radar (SAR) imagery, particularly from Sentinel-1, has widened the scope of day and night vegetation monitoring, even when cloud cover limits optical Earth observation. Yet, it is challenging to combine SAR images acquired at different incidence angles and from ascending and descending orbits because of the backscatter dependence on the incidence angle. This study demonstrates two transformations that facilitate collective use of Sentinel-1 imagery, regardless of the acquisition geometry, for agricultural monitoring of several crops in Israel (wheat, processing tomatoes, and cotton). First, the radar backscattering coefficient (σ0) was multiplied by the local incidence angle (θ) of every pixel. This transformation improved the empirical prediction of the crop coefficient (Kc), leaf area index (LAI), and crop height in all three crops. The second method, which is based on the radar brightness coefficient (β0), proved useful for estimating Kc, LAI, and crop height in processing tomatoes and cotton. Following the suggested transformations, R2 increased by 0.0172 to 0.668, and RMSE improved by 5 to 52%. Additionally, the models based on the suggested transformations were found to be superior to the models based on the dual-polarization radar vegetation index (RVI). Consequently, vegetation monitoring using SAR imagery acquired at different viewing geometries became more effective.