Efektivitas Antifungi Ekstrak Curcuma aeruginosa terhadap Patogenisitas Colletotrichum capsici pada Tanaman Cabai Merah (Antifungi Effectivity of Curcuma aeruginosa Extract to Colletotrichum capsici Pathogenicity on Red Chilli Pepper)

<p>Antraknosa yang disebabkan oleh Colletotrichum capsici masih menjadi penyakit utama yang menyerang buah cabai merah. Selama ini, penggunaan Curcuma aeruginosa sebagai antimikrobe patogen penyebab penyakit pada manusia lebih populer daripada sebagai antimikrobe fitopatogen. Rimpang Curcuma diketahui mengandung senyawa volatil/atsiri dan nonvolatil. Potensi senyawa volatil/atsiri Curcuma sebagai antimikrobe telah banyak dilaporkan, namun masih sangat terbatas untuk senyawa nonvolatilnya. Penelitian ini bertujuan mengetahui efektivitas antifungi senyawa nonvolatil dari ekstrak C. aeruginosa terhadap C. capsici pada buah cabai merah. Penelitian dilaksanakan pada bulan November 2014 hingga Mei 2015 di Universitas Brawijaya. Senyawa nonvolatil didapatkan dengan merendam rimpang C. aeruginosa menggunakan pelarut metanol kemudian didistilasi menggunakan rotary vacuum evaporator dan diidentifikasi menggunakan HPLC. Efektivitas antifungi senyawa nonvolatil dari ekstrak rimpang C. aeruginosa diuji secara in vitro dan in vivo di laboratorium menggunakan Rancangan Acak Lengkap dengan tiga kali ulangan. Perlakuan yang diujikan yaitu konsentrasi senyawa nonvolatil terdiri atas 0 (kontrol), 4, 6, 8, 10, dan 12 ppm. Senyawa nonvolatil dari ekstrak rimpang C. aeruginosa sangat efektif menghambat pertumbuhan C. capsici baik secara in vivo maupun in vitro di laboratorium bahkan konsentrasi 12 ppm menunjukkan persentase penghambatan antraknosa hingga 100%. Hasil identifikasi HPLC menunjukkan bahwa senyawa nonvolatil dari ekstrak rimpang C. aeruginosa mengandung kelompok Curcuminoid yang terdiri atas curcumin dan demethoxycurcumin yang berperan sebagai antifungi sehingga sangat berpotensi dikembangkan sebagai fungisida nabati.</p><p><strong>Keywords</strong></p><p>Antraknosa; Cabai merah; C. aeruginosa; Senyawa nonvolatil</p><p><strong>Abstract</strong></p><p>Anthracnose caused by Colletotrichum capsici is still as major disease against chilli pepper fruit. During this time, utilization of C. aeruginosa as pathogen antimicrobial caused disease to human is more popular than to crops. Curcuma has been known containing volatile and nonvolatile compound. Potential of volatil compound from Curcuma as antipathogen has been reported widely, nevertheless it is still limited known for nonvolatile compound. This research aimed to understand the antifungi effectivity of nonvolatile compound from C. aeruginosa extract to C. capsici on chilli pepper fruit. Research was conducted in November 2014 to Mei 2015. Nonvolatile compound was obtained by soaking C. aeruginosa rhizome into methanol solvent then distilated using rotary vacuum evaporator and identified with HPLC instrument. Antifungi effectivity of nonvolatile compound from C. aeruginosa extract was experimented by in vitro and in vivo test using Completely Randomized Design with three replications. Treatments tested were various concentrations of nonvolatile compound namely 0 (control), 4, 6, 8,10, and 12 ppm. Nonvolatile compound from C. aeruginosa extract was highly effective to inhibit growth of C. capsici by both in vitro and in vivo test. HPLC identification result showed nonvolatile compound from C. aeruginosa extract contains Curcuminoid group play role as antifungi.</p>

IDENTIFIKASI ISOLAT Trichoderma spp., GADING REJO, TANGGAMUS DAN LAMPUNG TIMUR YANG BERPOTENSI ANTAGONIS TERHADAP ANTRAKNOSA CABAI

Jamur Trichoderma spp., merupakan salah satu agen hayati yang banyak dikembangkan berdasarkan potensi antagonisnya terhadap beberapa penyakit tanaman. Berdasarkan potensi antagonisnya, pada penelitian ini digunakan tiga koleksi isolat Trichoderma spp., yang berasal dari tiga wilayah berbeda (Gading Rejo, Tanggamus dan Lampung Timur) guna pengendalian penyakit antraknosa cabai secara in vitro. Penelitian ini bertujuan untuk mengetahui spesies dan jumlah pasang basa koleksi isolat Trichoderma spp., serta mendapatkan isolat yang memiliki kemampuan antagonis terbaik terhadap jamur Colletotrichum capsici penyebab penyakit antraknosa pada cabai.

Confirmation de QTL et validation de marqueurs SNPs associés à la résistance du niébé à Colletotrichum capsici, agent responsable de la maladie des taches brunes

Le niébé (Vigna unguiculata (L.) Walp.) est une légumineuse à graine très importante et constitue la principale source de protéines végétales pour l’alimentation des populations d’Afrique Subsaharienne. Sa production au Burkina Faso est entravée par la maladie des taches brunes provoquée par un champignon, Colletotrichum capsici (Syd.) Butler et Bisby. C’est dans la perspective d’accroître la productivité du niébé que nous avons entrepris de renforcer la lutte variétale contre cet agent pathogène. L’identification de marqueurs SNPs (Single Nucleotide Polymorphism) et QTL liés à la résistance à la maladie des taches brunes a été entrepris à partir d’une population biparentale F2 issus du croisement entre la variété sensible Tiligré et celle résistante KN-1. L’analyse QTL de la résistance du niébé à C. capsici à partir de la méthode ICIM add. a permis de confirmer et de valider respectivement un QTL majeur dénommé qBBDR2.1 et 9 marqueurs SNPs convertis, lesquels ont été cartographiés sur le chromosome Vu02 du niébé. Ce QTL dominant a présenté des effets additifs élevés liés aux allèles favorables de KN-1 et des valeurs de PVE de l’ordre de 51,50% et 55,33%, respectivement aux 21ème et 28ème JAI. English title: Confirmation of QTL mapping and validation of SNPs markers associated to cowpea resistance to Colletotrichum capsici, causal agent of brown blotch disease Cowpea (Vigna unguiculata (L.)Walp.) is one of the most important grain legume crops and constitutes the main source of plant protein for people food in sub-Saharan Africa. Cowpea production in Burkina Faso is constrained by brown blotch disease caused by a fungal, Colletotrichum capsici (Syd.) Butler and Bisby. In order to increase cowpea productivity we initiated a project to enhance host plant resistance to control the pathogen. The identification of SNP (Single Nucleotide Polymorphism) markers and QTL associated with brown blotch disease resistance was undertaken from a bi-parental F2 population resulting from a cross between the sensitive variety Tiligre and the resistant KN-1 to the disease. QTL analysis of cowpea resistance to C. capsici using the ICIM add method. Allowed to confirm and validate respectively a major QTL named qBBDR2.1 and 9 converted SNP markers, which were mapped on cowpea chromosome Vu02. This dominant QTL showed higher additive effects associated to alleles from KN-1 and PVE values of 51.50% and 55.33% respectively at 21 and 28 days after inoculation

Perbandingan Teknik Penyimpanan Menggunakan Medium Yang Berbeda Terhadap Viabilitas Kapang Colletotrichum capsici dan Prycularia oryzae

Laboratory of Microbiology which is part of Basic Laboratory System in Faculty of Mathematics and Natural Sciences University of Lambung Mangkurat have commonly used as a place of various activities both science academic practice and research. This laboratory also provides analysis for samples and production. Microbial culture plays important rule in practical science of microorganism. Thus, continuous culture and preservation are highly required. Preservation and re-culture of microbes in the laboratory recently using short-term preservation and periodic re-culture to a new medium, so it is necessary to conduct research on microbial preservation, especially molds with certain preservation techniques using different media. Colletotrichum capsici and Prycularia oryzae isolates were used in this study. The two molds were stored using different mediums: tapioca, 50% PDB + glycerol, and 50% PDB + liquid paraffin with a preservation period up to 1-3 months. The preserved mold was then cultured onto PDA medium to see its viability. The results of preservation of Colletotrichum capsici for 1-3 months using 3 different types of medium showed that 50% of liquid PDB-paraffin medium had the best viability compared to tapioca medium and 50% PDB-glycerol. Prycularia oryzae preserved for 1-3 months using tapioca medium, 50% PDB-glycerol, and 50% liquid PDB-paraffin cannot grow back.

Molecular dynamics investigation of the interaction between Colletotrichum capsici cutinase and berberine suggested a mechanism for reduced enzyme activity

Berberine is a promising botanical pesticide against fungal plant pathogens. However, whether berberine inhibits the invasion of fungal pathogen across plant surface remains unclear. Here we demonstrated that the enzyme activities of purified cutinase from fungal pathogen Colletotrichum capsici were partially inhibited in presence of berberine toward different substrates. Molecular dynamics simulation results suggested the rigidity of cutinase was decreased with berberine added into the system. Interestingly, aggregations of berberine to the catalytic center of cutinase were observed, and stronger hydrophobic interactions were detected between key residue His 208 and berberine with concentrations of berberine increased. More importantly, this hydrophobic interaction conferred conformational change of the imidazole ring of His 208, which swung out of the catalytic center to an inactive mode. In summary, we provided the molecular mechanism of the effect of berberine on cutinase from C. capsici.