Passive concentration dynamics incorporated into the library IB2d, a two-dimensional implementation of the immersed boundary method

In this paper, we present an open-source software library that can be used to numerically simulate the advection and diffusion of a chemical concentration or heat density in a viscous fluid where a moving, elastic boundary drives the fluid and acts as a source or sink. The fully- coupled fluid-structure interaction problem of an elastic boundary in a viscous fluid is solved using Peskin’s immersed boundary method. The addition or removal of the concentration or heat density from the boundary is solved using an immersed boundary-like approach in which the concentration is spread from the immersed boundary to the fluid using a regularized delta function. The concentration or density over time is then described by the advection-diffusion equation and numerically solved. This functionality has been added to our software library, IB2d, which provides an easy-to-use immersed boundary method in two dimensions with full implementations in MATLAB and Python. We provide four examples that illustrate the usefulness of the method. A simple rubber band that resists stretching and absorbs and releases a chemical concentration is simulated as a first example. Complete convergence results are presented for this benchmark case. Three more biological examples are presented: (1) an oscillating row of cylinders, representative of an idealized appendage used for filter-feeding or sniffing, (2) an oscillating plate in a background flow is considered to study the case of heat dissipation in a vibrating leaf, and (3) a simplified model of a pulsing soft coral where carbon dioxide is taken up and oxygen is released as a byproduct from the moving tentacles. This method is applicable to a broad range of problems in the life sciences, including chemical sensing by antennae, heat dissipation in plants and other structures, the advection-diffusion of morphogens during development, filter-feeding by marine organisms, and the release of waste products from organisms in flows.

Boundary Reflections of Rolling Waves in Cubic Anisotropic Material

Rolling waves have unconventional circular polarizations enabled by the equal-speed propagation of longitudinal and transverse waves in elastic solids. They can transport non-paraxial intrinsic (i.e. spin) mechanical angular momentum in the media. In this work, we analyze the rolling wave reflections and their effects on the non-paraxial spins in a cubic elastic half-space with an elastically supported boundary. Reflected waves from both normal and general oblique incidences are investigated. We show that, by adjusting the stiffness of the elastic boundary, we can precisely control the spin properties of the reflected waves, paving the way towards a broad category of spin manipulation techniques for bulk elastic waves.

Free vibration analysis of rectangular plates with arbitrary elastic boundary conditions

boundary conditions are In this paper, an improved Fourier series method is presented for the free vibration analysis of rectangular plates with arbitrary elastic conditions. The stiffness value of the restraining springs is determined as required to simulate the arbitrary elastic boundary conditions. The exact solution of plates with arbitrary elastic boundary conditions is solved by the introduced supplementary func-tions. The matrix eigenvalue equation of plates is derived by using boundary conditions and the governing equations. Compared with exist methods, the presented method can be easily applied to most of plate vibration problems with different boundary conditions. To validate the accuracy of the presented method, numerical simulations with different boundary conditions are presented.presented.

Vibration Characteristics Analysis of Composite Laminated Annular/Circular Plate Using High-Order Shear Deformation Theory

In this paper, the free vibration behaviors of composite laminated annular and circular plates under complex elastic boundary constraints are investigated. Firstly, Reddy’s high-order shear deformation theory (HSDT) and Jacobi polynomial method are effectively combined to establish the unified vibration analysis model of composite laminated annular and circular plates. Secondly, the simulation of complex elastic boundary and coupling boundary is realized by using artificial virtual spring technology. Then, the energy equation of the composite laminated plate is established by using Rayleigh–Ritz energy technology. Finally, the free vibration solution equation of the laminated plate is obtained through the Hamilton differential principle. The fast and uniform convergence of this method and the accuracy of the calculated results are verified by numerical examples and the model experimental method. On this basis, the parameterization study is conducted, and the effects of material parameters, geometric parameters, spring stiffness values, and lamination scheme on the vibration characteristics of the annular or circular plate are fully discussed, which can provide a theoretical basis for future research.