biological uptake
Recently Published Documents


TOTAL DOCUMENTS

76
(FIVE YEARS 16)

H-INDEX

19
(FIVE YEARS 3)

PLoS ONE ◽  
2021 ◽  
Vol 16 (11) ◽  
pp. e0259781
Author(s):  
Kunihiro Aoki ◽  
Ryo Furue

The size distribution of marine microplastics provides a fundamental data source for understanding the dispersal, break down, and biotic impacts of the microplastics in the ocean. The observed size distribution at the sea surface generally shows, from large to small sizes, a gradual increase followed by a rapid decrease. This decrease has led to the hypothesis that the smallest fragments are selectively removed by sinking or biological uptake. Here we propose a new model of size distribution, focusing on the fragmentation of marine plastics. The model is inspired by ideas from statistical mechanics. In this model, the original large plastic piece is broken into smaller pieces once by the application of “energy” or work by waves or other processes, under two assumptions, one that fragmentation into smaller pieces requires larger energy and the other that the occurrence probability of the “energy” exponentially decreases toward larger energy values. Our formula well reproduces observed size distributions over wide size ranges from micro- to mesoplastics. According to this model, the smallest fragments are fewer because large “energy” required to produce such small fragments occurs more rarely.


2021 ◽  
Author(s):  
Stefan Willem Ploum ◽  
Anna Lupon ◽  
Jason A. Leach ◽  
Lenka Kuglerová ◽  
Hjalmar Laudon

Abstract. The supply of terrestrial dissolved organic carbon (DOC) to aquatic ecosystems affects local in-stream processes and downstream transport of DOC in the fluvial network. However, we have an incomplete understanding on how terrestrial DOC inputs alter longitudinal variations of DOC concentration along headwater stream reaches because groundwater discharge, groundwater DOC concentration and in-stream DOC uptake vary at relatively short spatial and temporal scales. In the riparian zone, the convergence of subsurface flow paths can facilitate the inflow of terrestrial DOC from large upslope contributing areas to narrow sections of the stream. We refer to these areas of flow path convergence as discrete riparian inflow points (DRIPs). In this study, we ask how longitudinal patterns of stream DOC concentrations are affected by DRIPs, as they are major inputs of terrestrial DOC and important locations for in-stream processes. We used a mixing model to simulate stream DOC concentrations along a 1.5 km headwater reach for fifteen sampling campaigns with flow conditions ranging from droughts to floods. Four sets of model scenarios were used to compare different representations of hydrology (distributed inputs of DRIPs vs diffuse groundwater inflow), and in-stream processes (passive transport vs in-stream biological uptake). Results showed that under medium (10–50 l/s) and high flow conditions (> 50 l/s), accounting for lateral groundwater inputs from DRIPs improved simulations of stream DOC concentrations along the reach. Moreover, in-stream biological uptake improved simulations across low to medium flow conditions (< 50 l/s). Only during an experimental drought, longitudinal patterns of stream DOC concentration were simulated best using diffuse groundwater inflow and passive transport scenarios. These results show that the role of hydrology and in-stream processes on modulating downstream DOC exports varies over time. Importantly, we demonstrate that accounting for preferential groundwater inputs to the stream is needed to capture longitudinal dynamics in mobilization and in-stream uptake of terrestrial DOC. The dominant role of DRIPs in these transport and reaction mechanisms suggests that consideration of DRIPs can improve stream biogeochemistry frameworks and help inform management of near-stream areas that exert a large influence on stream conditions.


2021 ◽  
pp. 120378
Author(s):  
Mohd Danish ◽  
Gyana Ranjan Tripathy ◽  
Sirsha Mitra ◽  
Rakesh Kumar Rout ◽  
Shubhangi Raskar

2020 ◽  
Vol 17 (23) ◽  
pp. 5989-6015
Author(s):  
Quentin Charbonnier ◽  
Julien Bouchez ◽  
Jérôme Gaillardet ◽  
Éric Gayer

Abstract. The biological cycle of rock-derived nutrients on the continents is a major component of element transfer between the Earth's surface compartments, but its magnitude currently remains elusive. The use of the stable isotope composition of rock-derived nutrients, which can be fractionated during biological uptake, provides a promising path forward with respect to quantifying biological cycling and its overall contribution to global element cycling. In this paper, we rely on the nutrient-like behaviour of the trace element barium (Ba) and use its elemental and stable isotope compositions in dissolved and sediment load river samples to investigate biological cycling in the Amazon Basin. From these measurements, we show that dissolved Ba mainly derives from silicate rocks, and a correlation between dissolved Ba and K abundances suggests that biological cycling plays a role in the Ba river budget. Furthermore, the isotope composition of Ba (δ138Ba) in the dissolved load was found to be significantly different from that of the parent silicate rocks, implying that dissolved Ba isotopic signatures are affected by (i) the precipitation of soil-forming secondary phases as well as (ii) biological uptake and release from dead organic matter. Results from an isotope mass balance method applied to the river dissolved load data indicate that, after its release to solution by rock weathering, Ba is partitioned between the river dissolved load, secondary weathering products (such as those found in soils and river sediments), and the biota. In most sub-catchments of the Amazon, river Ba abundances and isotope compositions are significantly affected by biological cycling. Relationships between estimates of Ba cycled through biota and independent metrics of ecosystem dynamics (such as gross primary production and terrestrial ecosystem respiration) allow us to discuss the role of environmental parameters such as climate or erosion rates on the biological cycling of Ba and, by extension, the role of major rock-derived nutrients. In addition, catchment-scale mass and isotope budgets of Ba show that the measured riverine export of Ba is lower than the estimated delivery of Ba to the Earth surface through rock alteration. This indicates the existence of a missing Ba component, which we attribute to the formation of Ba-bearing particulate organics (possibly accumulating as soil organic matter or currently growing biomass within the catchments) and to organic-bound Ba exported as “unsampled” river particulate organic matter. Given our findings on the trace element Ba, we explore whether the river fluxes of most major rock-derived nutrients (K, Mg, Ca) might also be significantly affected by biological uptake or release. A first-order correction of river-derived silicate weathering fluxes from biological cycling shows that the carbon dioxide (CO2) consumption by silicate weathering at the mouth of the Amazon could be several times higher than the previously reported value of 13 × 109 mol CO2 yr−1 (Gaillardet et al., 1997). Overall, our study clearly shows that the chemical and isotope compositions of rivers in the Amazon – and most likely in other large river basins – bear a biological imprint, thereby challenging common assumptions made in weathering studies.


2020 ◽  
Author(s):  
Kunihiro Aoki ◽  
Ryo Furue

Abstract The size distribution of marine microplastics (< 5 mm) provides a fundamental data source for understanding the dispersal, break down, and biotic impacts of the microplastics in the ocean. The observed size distribution generally shows, from large to small sizes, a gradual increase followed by a rapid decrease. This decrease has led to the hypothesis that the smallest fragments are selectively removed by sinking or biological uptake. Here we propose a new model of size distribution without any removal of material from the system. The model uses an analogy with black-body radiation and the resultant size distribution is analogous to Planck's law. In this model, the original large plastic piece is broken into smaller pieces once by the application of “energy” or work by waves or other processes, under two assumptions, one that fragmentation into smaller pieces requires larger energy and the other that the probability distribution of the “energy” follows the Boltzmann distribution. Our formula well reproduces observed size distributions over wide size ranges from micro- (< 5 mm) to mesoplastics ( > 5 mm). According to this model, the smallest fragments are fewer because large “energy” required to produce such small fragments occurs more rarely.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
K. Kvale ◽  
A. E. F. Prowe ◽  
C.-T. Chien ◽  
A. Landolfi ◽  
A. Oschlies

Abstract Every year, about four percent of the plastic waste generated worldwide ends up in the ocean. What happens to the plastic there is poorly understood, though a growing body of evidence suggests it is rapidly spreading throughout the global ocean. The mechanisms of this spread are straightforward for buoyant larger plastics that can be accurately modelled using Lagrangian particle models. But the fate of the smallest size fractions (the microplastics) are less straightforward, in part because they can aggregate in sinking marine snow and faecal pellets. This biologically-mediated pathway is suspected to be a primary surface microplastic removal mechanism, but exactly how it might work in the real ocean is unknown. We search the parameter space of a new microplastic model embedded in an earth system model to show that biological uptake can significantly shape global microplastic inventory and distributions and even account for the budgetary “missing” fraction of surface microplastic, despite being an inefficient removal mechanism. While a lack of observational data hampers our ability to choose a set of “best” model parameters, our effort represents a first tool for quantitatively assessing hypotheses for microplastic interaction with ocean biology at the global scale.


Molecules ◽  
2020 ◽  
Vol 25 (17) ◽  
pp. 3985
Author(s):  
Jae Young Lee ◽  
Sajid Mushtaq ◽  
Jung Eun Park ◽  
Hee Soon Shin ◽  
So-Young Lee ◽  
...  

Concern about environmental exposure to hazardous substances has grown over the past several decades, because these substances have adverse effects on human health. Methods used to monitor the biological uptake of hazardous substances and their spatiotemporal behavior in vivo must be accurate and reliable. Recent advances in radiolabeling chemistry and radioanalytical methodologies have facilitated the quantitative analysis of toxic substances, and whole-body imaging can be achieved using nuclear imaging instruments. Herein, we review recent literature on the radioanalytical methods used to study the biological distribution, changes in the uptake and accumulation of hazardous substances, including industrial chemicals, nanomaterials, and microorganisms. We begin with an overview of the radioisotopes used to prepare radiotracers for in vivo experiments. We then summarize the results of molecular imaging studies involving radiolabeled toxins and their quantitative assessment. We conclude the review with perspectives on the use of radioanalytical methods for future environmental research.


PLoS ONE ◽  
2020 ◽  
Vol 15 (5) ◽  
pp. e0228896 ◽  
Author(s):  
Austin K. Baldwin ◽  
Andrew R. Spanjer ◽  
Michael R. Rosen ◽  
Theresa Thom

2020 ◽  
Author(s):  
Quentin Charbonnier ◽  
Julien Bouchez ◽  
Jérôme Gaillardet ◽  
Éric Gayer

Abstract. Although biological cycling of rock-derived nutrients is a major operator of element cycles at the Earth surface, its magnitude still remains elusive. The isotope composition of rock-derived nutrients, which can be fractionated during biological uptake, is a powerful tool to quantify biological cycling. In this paper we use the elemental and isotopic composition of such a rock-derived nutrient, the trace element barium (Ba), measured in river dissolved and sediment load samples collected across the Amazon Basin. We show that dissolved Ba derives mainly from silicate rocks, while a correlation between dissolved Ba and K abundances suggests a strong role of biological cycling on the Ba river budget. The isotope composition of Ba (δ138Ba) of the dissolved load is significantly different from that of silicate rocks and is affected by i) formation of secondary phases and ii) biological uptake and release from dead organic matter. Results from an isotope mass balance model applied to the river dissolved load data indicate that after its release to solution by rock weathering, Ba is partitioned between the dissolved load, the secondary weathering products such as those found in soils and river sediments, and the biota. In most sub-catchments of the Amazon, river dissolved Ba abundance and isotope composition are significantly affected by biological cycling. Relationships between estimates of Ba cycling and independent metrics of ecosystem dynamics (such as Gross Primary Production and Terrestrial Ecosystem Respiration) allows us to discuss the role of erosion rates on the cycling of rock-derived nutrients. In addition, river catchment-scale mass and isotope budgets of Ba show that the measured riverine export of Ba is lower than the estimated delivery of Ba to the Earth surface through rock alteration. This indicates the existence of a missing Ba component, that we attribute to the formation of a Ba-bearing particulate organic component, possibly accumulating as soil organic matter or currently growing biomass within the catchments; and to organic-bound exported as unsampled river particulate organic matter. Given our findings on the minor nutrient Ba, we explore whether the river fluxes of most major rock-derived nutrients (K, Mg, Ca) might also be significantly affected by biological uptake or release. A first-order correction of river-derived silicate weathering fluxes from biological cycling shows that, at the Amazon at mouth, the CO2 consumption by silicate weathering should be 20 % higher than the yet-reported value. Overall, our study clearly shows that the chemical and isotope composition of the Amazon (and most likely of most rivers) bears a biological imprint.


Sign in / Sign up

Export Citation Format

Share Document