microarray gene expression analysis
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Cancers ◽  
2021 ◽  
Vol 13 (20) ◽  
pp. 5248
Author(s):  
Swatishree Sradhanjali ◽  
Padmalochan Rout ◽  
Devjyoti Tripathy ◽  
Swathi Kaliki ◽  
Suryasnata Rath ◽  
...  

Retinoblastoma is usually initiated by biallelic RB1 gene inactivation. In addition, MYCN copy number alterations also contribute to RB pathogenesis. However, MYCN expression, its role in disease progression and correlation with RB histological risk factors are not well understood. We studied the expression of MYCN in enucleated RB patient specimens by immunohistochemistry. MYCN is overexpressed in RB compared to control retina. Our microarray gene expression analysis followed by qRT-PCR validation revealed that genes involved in glucose metabolism and migration are significantly downregulated in MYCN knockdown cells. Further, targeting MYCN in RB cells using small molecule compounds or shRNAs led to decreased cell survival and migration, increased apoptosis and cell cycle arrest, suggesting that MYCN inhibition can be a potential therapeutic strategy. We also noted that MYCN inhibition results in reduction in glucose uptake, lactate production, ROS levels and gelatinolytic activity of active-MMP9, explaining a possible mechanism of MYCN in RB. Taking clues from our findings, we tested a combination treatment of RB cells with carboplatin and MYCN inhibitors to find enhanced therapeutic efficacy compared to single drug treatment. Thus, MYCN inhibition can be a potential therapeutic strategy in combination with existing chemotherapy drugs to restrict tumor cell growth in RB.


2016 ◽  
Vol 49 (16-17) ◽  
pp. 1238-1242 ◽  
Author(s):  
Handan Ak ◽  
Burak Zeybek ◽  
Sevcan Atay ◽  
Niyazi Askar ◽  
Ali Akdemir ◽  
...  

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