dapi fluorescence
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2021 ◽  
Author(s):  
Samantha I. Edenfield ◽  
III Harry J. Gould ◽  
Dennis Paul

Abstract Voltage-gated sodium channels (VGSCs) are the target for many therapies. Variation in membrane potential occurs throughout the cell cycle, yet little attention has been devoted to VGSCs and Na+,K+-ATPase in the cell cycle. We hypothesized that in addition to doubling DNA and cell membrane in anticipation of cell division, there should be a doubling of VGSCs and Na+,K+-ATPase compared to non-dividing cells. We tested this hypothesis in eight immortalized cell lines by correlating immunocytofluorescent labeling of VGSCs or Na+,K+-ATPase, with propidium iodide or DAPI fluorescence using flow cytometry. Cell surface expression of VGSCs during phases S through M was double that seen during phases G0 - G1. By contrast, Na+,K+-ATPase expression increased only 1.5-fold. The increases were independent of baseline expression of channels or pumps. The variation in VGSC and Na+,K+-ATPase expression has implications for both our understanding of sodium's role in controlling the cell cycle and variability of treatments targeted at these components of the Na+ handling system.


2018 ◽  
Vol 40 (2) ◽  
Author(s):  
Zeynel Dalkiliç ◽  
Gonca Günver Dalkiliç

Abstract In this study, fig and black mulberry DNA contents were estimated using DAPI fluorescence stain in flow cytometry. The 2C DNA contents of the fig and black mulberry were found as 0.82 pg and 8.34 pg, respectively. The calculated 1C value of genome size of fig is 401.8 Mbp and that of black mulberry is 4086.6 Mbp. The ratio of 2C DNA content and 1C genome of the black mulberry was 10.17 times that of the fig although fig is diploid and black mulberry is decosaploid.


2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Ana Katrina Estandarte ◽  
Stanley Botchway ◽  
Christophe Lynch ◽  
Mohammed Yusuf ◽  
Ian Robinson

2016 ◽  
Vol 44 (1) ◽  
pp. 46-49 ◽  
Author(s):  
Sidney Omelon ◽  
John Georgiou ◽  
Wouter Habraken

The fluorescent dye DAPI is useful for its association with and consequent amplification of an ∼460 nm emission maximum upon binding to dsDNA. Labelling with higher DAPI concentrations is a technique used to reveal Pi polymers [polyphosphate (polyP)], with a red-shift to ∼520–550 nm fluorescence emission. DAPI–polyP emissions of ∼580 nm are also generated upon 415 nm excitation. Red-shifted DAPI emission has been associated with polyP and RNA and has more recently been reported with polyadenylic acid (polyA), specific inositol phosphates (IPs) and heparin. We find that amorphous calcium phosphate (ACP) also demonstrates red-shifted DAPI emission at high DAPI concentrations. This DAPI spectral shift has been attributed to DAPI–DAPI electrostatic interactions enabled by molecules with high negative charge density that increase the local DAPI concentration and favour DAPI molecular proximity, as observed by increasing the dye/phosphate ratio. Excitation of dry DAPI (∼360 nm) confirmed a red-shifted DAPI emission. Whereas enzymatic approaches to modify substrates can help define the nature of DAPI fluorescence signals, multiple approaches beyond red-shifted DAPI excitation/emission are advised before conclusions are drawn about DAPI substrate identification.


2016 ◽  
Vol 44 (01) ◽  
pp. 165-176 ◽  
Author(s):  
Zih-Ying Li ◽  
Wen-Chung Huang ◽  
Rong-Syuan Tu ◽  
Pei-Yu Gu ◽  
Chwan-Fwu Lin ◽  
...  

Sophoraflavanone G (SG) was isolated from Sophora flavescens. Previously, we have found that SG is able to suppress the inflammatory response in lipopolysaccharide-stimulated RAW 264.7 macrophages. This study aimed to evaluate the effects of SG on apoptosis, and explore its molecular mechanism in human leukemia HL-60 cells. HL-60 cells were treated with various concentrations of SG (3–30 [Formula: see text]M). The viability of the HL-60 cells was assessed using the MTT method, and the nuclear condensation indicative of apoptosis was observed by DAPI fluorescence staining. In addition, apoptotic signal proteins were examined using Western blotting. The results showed that apoptosis, including DNA fragmentation and nuclear condensation, increased significantly in SG-treated HL-60 cells. SG activated caspase-3 and caspase-9, and downregulated Bcl-2 and Bcl-xL. SG also upregulated Bax and released cytochrome c from the mitochondria into the cytoplasm, enabling apoptosis via the mitochondrially-mediated “intrinsic” pathway. Additionally, SG was able to cleave poly (ADP-ribose) polymerase 1 and activate mitogen-activated protein kinase (MAPK) pathways. These results suggest that SG might increase the effect of apoptosis on HL-60 cells through caspase-3 activation, mitochondrial-mediated pathways, and the MAPK pathway.


2014 ◽  
Vol 460 (3) ◽  
pp. 377-385 ◽  
Author(s):  
Bernadett Kolozsvari ◽  
Federica Parisi ◽  
Adolfo Saiardi

The inositol phosphates IP5 and IP6 induce a specific DAPI fluorescence, whereas lower phosphorylated forms do not. The fluorescence properties of DAPI–IP5 and DAPI–IP6 complexes allow the easy assessment of the amounts and enzymatic conversion of these two important cellular messengers.


2014 ◽  
Vol 74 (1) ◽  
pp. 251-256 ◽  
Author(s):  
IA Zappes ◽  
AS Portella ◽  
GM Lessa

Kerodon acrobata is a caviidae rodent endemic from Brazilian Cerrado. It was described only in 1997 and the data about it is very scarce. The aim of this work was to characterize the karyotype of K. acrobata. Giemsa staining, nucleolar organizer region (NOR) banding, C-positive heterochromatin banding and DAPI fluorescence were used in N metaphases of a specimen collected in Asa Branca Farm, in Aurora do Tocantins municipality, Tocantins state, Brazil. K. acrobata showed the same diploid number, fundamental number and chromosome morphology as Kerodon rupestris. But its NOR location and heterochromatin distribution patterns indicated a unique cytogenetic profile when compared to its sister species, emphasizing the evolutionary uniqueness of this relatively new and unknown species. This record also extends the distribution of this species northward.


Genome ◽  
2011 ◽  
Vol 54 (9) ◽  
pp. 771-778 ◽  
Author(s):  
Concepción Pérez-García ◽  
Paloma Morán ◽  
Juan J. Pasantes

The chromosomes of the invasive black-pigmy mussel (Xenostrobus securis (Lmk. 1819)) were analyzed by means of 4’,6-diamidino-2-phenylindole (DAPI) / propidium iodide (PI) and chromomycin A3 (CMA) / DAPI fluorescence staining and fluorescent in situ hybridization using major rDNA, 5S rDNA, core histone genes, linker histone genes, and telomeric sequences as probes. The diploid chromosome number in this species is 2n = 30. The karyotype is composed of seven metacentric, one meta/submetacentric, and seven submetacentric chromosome pairs. Telomeric sequences appear at both ends of every single chromosome. Major rDNA clusters appear near the centromeres on chromosome pairs 1 and 3 and are associated with bright CMA fluorescence and dull DAPI fluorescence. This species shows five 5S rDNA clusters close to the centromeres on four chromosome pairs (2, 5, 6, and 8). Three of the four core histone gene clusters map to centromeric positions on chromosome pairs 7, 10, and 13. The fourth core histone gene cluster occupies a terminal position on chromosome pair 8, also bearing a 5S rDNA cluster. The two linker histone gene clusters are close to the centromeres on chromosome pairs 12 and 14. Therefore, the use of these probes allows the unequivocal identification of 11 of the 15 chromosome pairs that compose the karyotype of X. securis.


2008 ◽  
Vol 37 (1) ◽  
pp. 74-77 ◽  
Author(s):  
M. S. Lin ◽  
K. H. Huynh ◽  
A. Fujimoto ◽  
M. G. Wilson
Keyword(s):  

2007 ◽  
Vol 40 (1) ◽  
Author(s):  
CRISTIAN GALLARDO-ESCÁRATE ◽  
JOSUÉ ÁLVAREZ-BORREGO ◽  
ELISABETH VON BRAND ◽  
ENRIQUE DUPRÉ ◽  
MIGUEL ÁNGEL DEL RÍO-PORTILLA

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